RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 C15orf52Q6ZUT6 534 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 MRPL50Q8N5N7 158 aaKnown RBP12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 ANKRD2Q9GZV1 360 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 UTYO14607 1347 aa12.37□□□□□ -0.43
TMEM39A-210ENST00000490099 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 IGHMBP2P38935 993 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 TXNRD3Q86VQ6 643 aa12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 KAZALD1Q96I82 304 aa12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 WDR33Q9C0J8 1336 aaKnown RBP12.36□□□□□ -0.43
TMEM39A-210ENST00000490099 USP17L3A6NCW0 530 aa12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 USP17L4A6NCW7 530 aa12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 USP17L1Q7RTZ2 530 aa12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 ABT1Q9ULW3 272 aaKnown RBP12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 ZNF804BA4D1E1 1349 aa12.35□□□□□ -0.43
TMEM39A-210ENST00000490099 ANKRD18BA2A2Z9 1011 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 FOXN1O15353 648 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 USP17L8P0C7I0 530 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 MMP14P50281 582 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 CHRNDQ07001 517 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 IFIT5Q13325 482 aaKnown RBP12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 STRIP1Q5VSL9 837 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 LMBR1LQ6UX01 489 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 CAPNS2Q96L46 248 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 SRCIN1Q9C0H9 1055 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 PSME4Q14997 1843 aa12.34□□□□□ -0.43
TMEM39A-210ENST00000490099 G3V3G9 751 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 KLRK1P26718 216 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 MAP2K2P36507 400 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 ECE1P42892 770 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 KIF4BQ2VIQ3 1234 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 RABL6Q3YEC7 729 aaPredicted RBP12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 DCAF8Q5TAQ9 597 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 KRT26Q7Z3Y9 468 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 SSH1Q8WYL5 1049 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 PTPRCP08575 1304 aa12.33□□□□□ -0.44
TMEM39A-210ENST00000490099 POLR2AP24928 1970 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 NBPF7P0C2Y1 421 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 ALDH1L2Q3SY69 923 aa12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 DLK2Q6UY11 383 aa12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 DCPSQ96C86 337 aaKnown RBP12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 CDCA7LQ96GN5 454 aa12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 ASTN2O75129 1339 aaPredicted RBP12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 PITPNM2Q9BZ72 1349 aa12.32□□□□□ -0.44
TMEM39A-210ENST00000490099 THSD7BQ9C0I4 1608 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 CT47B1P0C2W7 299 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 CTCFP49711 727 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 BRPF1P55201 1214 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 SCARF1Q14162 830 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 CYP4F22Q6NT55 531 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 SUCLG2Q96I99 432 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 CD209Q9NNX6 404 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 MYOZ2Q9NPC6 264 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 C9orf78Q9NZ63 289 aaPredicted RBP12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 MYO3BQ8WXR4 1341 aa12.31□□□□□ -0.44
TMEM39A-210ENST00000490099 ZNF646O15015 1829 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 SNAP23O00161 211 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 IL1R1P14778 569 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 CCDC57Q2TAC2 916 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 TTLL5Q6EMB2 1281 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 MXD3Q9BW11 206 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 USP44Q9H0E7 712 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 GGA3Q9NZ52 723 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
TMEM39A-210ENST00000490099 ADM5C9JUS6 153 aa12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 TAF5LO75529 589 aa12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 FKBP1AP62942 108 aaKnown RBP12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
TMEM39A-210ENST00000490099 FAM155AB1AL88 458 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 WNT10BO00744 389 aa12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 HSPA8P11142 646 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 ANGEL2Q5VTE6 544 aaKnown RBP12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 OGFOD1Q8N543 542 aa12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 AIDAQ96BJ3 306 aa12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 CDCA5Q96FF9 252 aa12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 GBA2Q9HCG7 927 aaPredicted RBP12.28□□□□□ -0.44
TMEM39A-210ENST00000490099 SPEF2Q9C093 1822 aa12.27□□□□□ -0.44
TMEM39A-210ENST00000490099 AOC2O75106 756 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 LBX1P52954 281 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 HUNKP57058 714 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 FKBP1BP68106 108 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 GTF2IP78347 998 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 UBE4AQ14139 1066 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms