RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EPHA10Q5JZY3 1008 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 AGBL3Q8NEM8 1001 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
SCAMP4-208ENST00000489554 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 USP17L3A6NCW0 530 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 USP17L4A6NCW7 530 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 KCNJ4P48050 445 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 HIRAP54198 1017 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 RSBN1LQ6PCB5 846 aaPredicted RBP13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 USP17L1Q7RTZ2 530 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 CRBNQ96SW2 442 aa13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 MKRN1Q9UHC7 482 aaKnown RBP13.24□□□□□ -0.29
SCAMP4-208ENST00000489554 SPEF2Q9C093 1822 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 WTIPA6NIX2 430 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 NBPF7P0C2Y1 421 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 TBC1D10BQ4KMP7 808 aaPredicted RBP13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 LDHAL6AQ6ZMR3 332 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 CDC37L1Q7L3B6 337 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 SUCLG2Q96I99 432 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
SCAMP4-208ENST00000489554 RASSF10A6NK89 507 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 TRAF5O00463 557 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 ZNF280AP59817 542 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 MVPQ14764 893 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 STRIP1Q5VSL9 837 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 EXOC6Q8TAG9 804 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 GLIS2Q9BZE0 524 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 ABT1Q9ULW3 272 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-208ENST00000489554 SCN9AQ15858 1988 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 MYO3BQ8WXR4 1341 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 USP17L8P0C7I0 530 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 KIF4BQ2VIQ3 1234 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 DEFB115Q30KQ5 88 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 RABL6Q3YEC7 729 aaPredicted RBP13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 C15orf52Q6ZUT6 534 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 TXNRD3Q86VQ6 643 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 FTSJ3Q8IY81 847 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 KAZALD1Q96I82 304 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 ZNF594Q96JF6 807 aaPredicted RBP13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 GMLQ99445 158 aa13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 BICC1Q9H694 974 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-208ENST00000489554 TAF5LO75529 589 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 EGFRP00533 1210 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 MS4A1P11836 297 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 KLRK1P26718 216 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 MMP14P50281 582 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 FMR1Q06787 632 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 DACT2Q5SW24 774 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 RBM26Q5T8P6 1007 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 CST9Q5W186 159 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 HELBQ8NG08 1087 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 DCPSQ96C86 337 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
SCAMP4-208ENST00000489554 PSME4Q14997 1843 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 ZBTB7BO15156 539 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 CELF2O95319 508 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 VEGFBP49765 207 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 KRT26Q7Z3Y9 468 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 OGFOD1Q8N543 542 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 FBXW7Q969H0 707 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 TLL2Q9Y6L7 1015 aa13.19□□□□□ -0.3
SCAMP4-208ENST00000489554 IRS2Q9Y4H2 1338 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 HSPA1AP0DMV8 641 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 HSPA1BP0DMV9 641 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 TTLL5Q6EMB2 1281 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 USP48Q86UV5 1035 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 SULF1Q8IWU6 871 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 ANKRD44Q8N8A2 993 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 CD209Q9NNX6 404 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 MYOZ2Q9NPC6 264 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 GGA3Q9NZ52 723 aa13.18□□□□□ -0.3
SCAMP4-208ENST00000489554 MROH5Q6ZUA9 1318 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 SNAP23O00161 211 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 ECE1P42892 770 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 GTF2IP78347 998 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 UBE4AQ14139 1066 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 SCARF1Q14162 830 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 SAPCD2Q86UD0 394 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 MEIS3Q99687 375 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 ZBTB40Q9NUA8 1239 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 DDX19BQ9UMR2 479 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 HDAC5Q9UQL6 1122 aa13.17□□□□□ -0.3
SCAMP4-208ENST00000489554 TRPM7Q96QT4 1865 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 UBTFL1P0CB47 393 aaPredicted RBP13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 IL1R1P14778 569 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 HHIPL1Q96JK4 782 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 MXD3Q9BW11 206 aa13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
SCAMP4-208ENST00000489554 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms