RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 NEK1Q96PY6 1258 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 MPHOSPH8Q99549 860 aa8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 LARP6Q9BRS8 491 aaKnown RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 BCL11BQ9C0K0 894 aaPredicted RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 QTRT2Q9H974 415 aaKnown RBP8.05□□□□□ -1.12
RN7SL561P-201ENST00000488553 MAST3O60307 1309 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 COL5A3P25940 1745 aaPredicted RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 M0R2C6 588 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 LARGE1O95461 756 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 SLC5A1P13866 664 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 PHKA1P46020 1223 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 EXOSC10Q01780 885 aaKnown RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 TOB2Q14106 344 aaPredicted RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 ME3Q16798 604 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZSCAN25Q6NSZ9 544 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 PI16Q6UXB8 463 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 C3orf67Q6ZVT6 689 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 APPBP2Q92624 585 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 SETDB2Q96T68 719 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 CDC5LQ99459 802 aaKnown RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 NYXQ9GZU5 481 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 PIH1D3Q9NQM4 214 aaKnown RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 BSDC1Q9NW68 430 aaPredicted RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 SRP68Q9UHB9 627 aaKnown RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 TPCN1Q9ULQ1 816 aa8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.04□□□□□ -1.12
RN7SL561P-201ENST00000488553 MYH14Q7Z406 1995 aaKnown RBP8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 GOLGA6L22H0YM25 854 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 GNPATO15228 680 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 FOXP2O15409 715 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 ZPR1O75312 459 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 HMGB1P09429 215 aaKnown RBP8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 ADD2P35612 726 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 CHRNDQ07001 517 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 ST3GAL1Q11201 340 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 UBE3CQ15386 1083 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 WASHC4Q2M389 1173 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 TRAPPC3LQ5T215 181 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 MCTP1Q6DN14 999 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 STOX1Q6ZVD7 989 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 SPATA5Q8NB90 893 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 LMBRD1Q9NUN5 540 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 CTNNA3Q9UI47 895 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 SMC3Q9UQE7 1217 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 SPEF2Q9C093 1822 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 LRP5O75197 1615 aa8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 WDR33Q9C0J8 1336 aaKnown RBP8.03□□□□□ -1.12
RN7SL561P-201ENST00000488553 TCRBV5S4A2TA0A5A2 114 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 SNAP23O00161 211 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 GTF2E1P29083 439 aaPredicted RBP8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 TM4SF1P30408 202 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 BCAMP50895 628 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 SLC9C2Q5TAH2 1124 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 BICDL1Q6ZP65 573 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 FAM196AQ6ZSG2 479 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 ANKRD18AQ8IVF6 992 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 CCDC83Q8IWF9 413 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 FBXL16Q8N461 479 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 NECAB1Q8N987 351 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 PUS7LQ9H0K6 701 aaKnown RBP8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 LRRC4BQ9NT99 713 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 MINPP1Q9UNW1 487 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 NHSQ6T4R5 1651 aa8.02□□□□□ -1.13
RN7SL561P-201ENST00000488553 A0A0G2JLW4 131 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 FSD2A1L4K1 749 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 E7EWF7 191 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 FGAP02671 866 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZSCAN22P10073 491 aaPredicted RBP8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 PDE6AP16499 860 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 SYT1P21579 422 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 RFC4P35249 363 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 RPS8P62241 208 aaKnown RBP8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 UBE4AQ14139 1066 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 KLHL40Q2TBA0 621 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 TTLL5Q6EMB2 1281 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 Q6ZUG5 572 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 NBPF5PQ86XG9 351 aaPredicted RBP8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 TCEANC2Q96MN5 208 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 AGXT2Q9BYV1 514 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZNF532Q9HCE3 1301 aa8.01□□□□□ -1.13
RN7SL561P-201ENST00000488553 ZBTB22O15209 634 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 GPAA1O43292 621 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 STX6O43752 255 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 PRPF40AO75400 957 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 IDH1O75874 414 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 ADRA2BP18089 450 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 GJB2P29033 226 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 ALX1Q15699 326 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 IMMTQ16891 758 aaKnown RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 SLC27A3Q5K4L6 730 aa8□□□□□ -1.13
RN7SL561P-201ENST00000488553 FOXD4L5Q5VV16 416 aaPredicted RBP8□□□□□ -1.13
RN7SL561P-201ENST00000488553 KRT27Q7Z3Y8 459 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms