RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 LRRC24Q50LG9 513 aa15.46■□□□□ 0.07
NELFE-209ENST00000488426 NLRP3Q96P20 1036 aa15.46■□□□□ 0.07
NELFE-209ENST00000488426 TLR7Q9NYK1 1049 aaKnown RBP15.46■□□□□ 0.07
NELFE-209ENST00000488426 TAF1P21675 1872 aa15.46■□□□□ 0.07
NELFE-209ENST00000488426 DDNO94850 711 aaPredicted RBP15.46■□□□□ 0.06
NELFE-209ENST00000488426 CHMLP26374 656 aa15.46■□□□□ 0.06
NELFE-209ENST00000488426 CEP126Q9P2H0 1117 aa15.46■□□□□ 0.06
NELFE-209ENST00000488426 DBNLQ9UJU6 430 aaKnown RBP15.46■□□□□ 0.06
NELFE-209ENST00000488426 FKBP4Q02790 459 aaKnown RBP eCLIP15.45■□□□□ 0.06
NELFE-209ENST00000488426 CCDC85AQ96PX6 553 aaPredicted RBP15.45■□□□□ 0.06
NELFE-209ENST00000488426 CRAMP1Q96RY5 1269 aa15.45■□□□□ 0.06
NELFE-209ENST00000488426 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
NELFE-209ENST00000488426 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
NELFE-209ENST00000488426 RIC1Q4ADV7 1423 aa15.45■□□□□ 0.06
NELFE-209ENST00000488426 TIAM2Q8IVF5 1701 aa15.45■□□□□ 0.06
NELFE-209ENST00000488426 ATP5JP18859 108 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 CCDC152Q4G0S7 254 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 EVI5LQ96CN4 794 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
NELFE-209ENST00000488426 PUS3Q9BZE2 481 aaKnown RBP15.44■□□□□ 0.06
NELFE-209ENST00000488426 SOGA3Q5TF21 947 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 ESYT1Q9BSJ8 1104 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 RIPOR2Q9Y4F9 1068 aa15.44■□□□□ 0.06
NELFE-209ENST00000488426 COL4A1P02462 1669 aa15.43■□□□□ 0.06
NELFE-209ENST00000488426 COL4A5P29400 1685 aa15.43■□□□□ 0.06
NELFE-209ENST00000488426 ZC3H4Q9UPT8 1303 aaKnown RBP15.43■□□□□ 0.06
NELFE-209ENST00000488426 HSPA6P17066 643 aa15.43■□□□□ 0.06
NELFE-209ENST00000488426 LDHAL6AQ6ZMR3 332 aa15.43■□□□□ 0.06
NELFE-209ENST00000488426 DBNDD2Q9BQY9 259 aa15.43■□□□□ 0.06
NELFE-209ENST00000488426 PPEF1O14829 653 aaPredicted RBP15.42■□□□□ 0.06
NELFE-209ENST00000488426 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
NELFE-209ENST00000488426 HTRA3P83110 453 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 ZNF541Q9H0D2 1346 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 EPB41L2O43491 1005 aaKnown RBP15.42■□□□□ 0.06
NELFE-209ENST00000488426 POTEIP0CG38 1075 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 USP26Q9BXU7 913 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
NELFE-209ENST00000488426 SPEF2Q9C093 1822 aa15.41■□□□□ 0.06
NELFE-209ENST00000488426 HIP1O00291 1037 aa15.41■□□□□ 0.06
NELFE-209ENST00000488426 VEGFAP15692 232 aaPredicted RBP15.41■□□□□ 0.06
NELFE-209ENST00000488426 IARSP41252 1262 aaKnown RBP15.41■□□□□ 0.06
NELFE-209ENST00000488426 METTL24Q5JXM2 366 aa15.41■□□□□ 0.06
NELFE-209ENST00000488426 DPY19L2Q6NUT2 758 aa15.41■□□□□ 0.06
NELFE-209ENST00000488426 NEUROD6Q96NK8 337 aa15.41■□□□□ 0.06
NELFE-209ENST00000488426 RFX7Q2KHR2 1363 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 MROH5Q6ZUA9 1318 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 BECN1Q14457 450 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 SF3B3Q15393 1217 aaKnown RBP15.4■□□□□ 0.06
NELFE-209ENST00000488426 CELF1Q92879 486 aaKnown RBP15.4■□□□□ 0.06
NELFE-209ENST00000488426 BOLA2Q9H3K6 86 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 ATP6V0A2Q9Y487 856 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 ARAP2Q8WZ64 1704 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 TIMM10P62072 90 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
NELFE-209ENST00000488426 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.4■□□□□ 0.06
NELFE-209ENST00000488426 RUFY2Q8WXA3 655 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 PSMD1Q99460 953 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 HAUS7Q99871 368 aa15.4■□□□□ 0.06
NELFE-209ENST00000488426 DAXXQ9UER7 740 aaPredicted RBP15.4■□□□□ 0.06
NELFE-209ENST00000488426 TICAM2Q86XR7 235 aa15.39■□□□□ 0.05
NELFE-209ENST00000488426 VGLL2Q8N8G2 317 aa15.39■□□□□ 0.05
NELFE-209ENST00000488426 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
NELFE-209ENST00000488426 DIAPH3Q9NSV4 1193 aa15.39■□□□□ 0.05
NELFE-209ENST00000488426 FZD9O00144 591 aa15.38■□□□□ 0.05
NELFE-209ENST00000488426 IGHMBP2P38935 993 aaKnown RBP15.38■□□□□ 0.05
NELFE-209ENST00000488426 ATP2B3Q16720 1220 aa15.38■□□□□ 0.05
NELFE-209ENST00000488426 DDX46Q7L014 1031 aaKnown RBP15.38■□□□□ 0.05
NELFE-209ENST00000488426 MPHOSPH8Q99549 860 aa15.38■□□□□ 0.05
NELFE-209ENST00000488426 SGSM2O43147 1006 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 PDE8BO95263 885 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 SEC31BQ9NQW1 1179 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 WDR90Q96KV7 1748 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 BBOX1O75936 387 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 GRAPQ13588 217 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 CCDC158Q5M9N0 1113 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 CC2D2BQ6DHV5 1058 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 SP8Q8IXZ3 490 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 GRAPLQ8TC17 118 aaPredicted RBP15.37■□□□□ 0.05
NELFE-209ENST00000488426 KIF2CQ99661 725 aa15.37■□□□□ 0.05
NELFE-209ENST00000488426 RAD50Q92878 1312 aa15.36■□□□□ 0.05
NELFE-209ENST00000488426 AOC3Q16853 763 aa15.36■□□□□ 0.05
NELFE-209ENST00000488426 XAGE2Q96GT9 111 aa15.36■□□□□ 0.05
NELFE-209ENST00000488426 FSD1Q9BTV5 496 aa15.36■□□□□ 0.05
NELFE-209ENST00000488426 A0A1B0GUL6 1792 aa15.36■□□□□ 0.05
NELFE-209ENST00000488426 MCCP23508 829 aa15.35■□□□□ 0.05
NELFE-209ENST00000488426 PUM3Q15397 648 aaKnown RBP15.35■□□□□ 0.05
NELFE-209ENST00000488426 GORABQ5T7V8 394 aa15.35■□□□□ 0.05
NELFE-209ENST00000488426 ANO2Q9NQ90 1003 aa15.35■□□□□ 0.05
NELFE-209ENST00000488426 IFIT1P09914 478 aaKnown RBP15.35■□□□□ 0.05
NELFE-209ENST00000488426 CWC27Q6UX04 472 aaKnown RBP15.35■□□□□ 0.05
NELFE-209ENST00000488426 LARGE2Q8N3Y3 721 aa15.35■□□□□ 0.05
NELFE-209ENST00000488426 DNAJC5GQ8N7S2 189 aa15.35■□□□□ 0.05
NELFE-209ENST00000488426 ZNF512BQ96KM6 892 aaPredicted RBP15.35■□□□□ 0.05
NELFE-209ENST00000488426 FGFR2P21802 821 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 ADORA1P30542 326 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 TTC39AQ5SRH9 613 aa15.34■□□□□ 0.05
NELFE-209ENST00000488426 ANKRD18AQ8IVF6 992 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms