RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 EYA3Q99504 573 aa13.5□□□□□ -0.25
HDLBP-242ENST00000488013 VPS33BQ9H267 617 aa13.5□□□□□ -0.25
HDLBP-242ENST00000488013 LRP5O75197 1615 aa13.5□□□□□ -0.25
HDLBP-242ENST00000488013 PDE1AP54750 535 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 TIMM10P62072 90 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 VPS37DQ86XT2 251 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 PLEKHM2Q8IWE5 1019 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 C7orf43Q8WVR3 580 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 XAGE2Q96GT9 111 aa13.49□□□□□ -0.25
HDLBP-242ENST00000488013 DDX60Q8IY21 1712 aaKnown RBP13.49□□□□□ -0.25
HDLBP-242ENST00000488013 SEMA3EO15041 775 aa13.48□□□□□ -0.25
HDLBP-242ENST00000488013 EIF5BO60841 1220 aaKnown RBP13.48□□□□□ -0.25
HDLBP-242ENST00000488013 IGSF3O75054 1194 aa13.48□□□□□ -0.25
HDLBP-242ENST00000488013 TAF5LO75529 589 aa13.48□□□□□ -0.25
HDLBP-242ENST00000488013 ATP5JP18859 108 aa13.48□□□□□ -0.25
HDLBP-242ENST00000488013 GPSM2P81274 684 aa13.48□□□□□ -0.25
HDLBP-242ENST00000488013 HELBQ8NG08 1087 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-242ENST00000488013 RTFDC1Q9BY42 306 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-242ENST00000488013 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
HDLBP-242ENST00000488013 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
HDLBP-242ENST00000488013 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 C6orf229H3BNL8 230 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 UFL1O94874 794 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 PDE4AP27815 886 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 RGS3P49796 1198 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 TTC39AQ5SRH9 613 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 ZNF804AQ7Z570 1209 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 C16orf71Q8IYS4 520 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-242ENST00000488013 TBC1D16Q8TBP0 767 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 PSMD1Q99460 953 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 DBNDD2Q9BQY9 259 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 FHDC1Q9C0D6 1143 aaPredicted RBP13.47□□□□□ -0.25
HDLBP-242ENST00000488013 ZC3H12CQ9C0D7 883 aaKnown RBP13.47□□□□□ -0.25
HDLBP-242ENST00000488013 ZNF609O15014 1411 aa13.47□□□□□ -0.25
HDLBP-242ENST00000488013 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.25
HDLBP-242ENST00000488013 LRRFIP1Q32MZ4 808 aaKnown RBP13.46□□□□□ -0.25
HDLBP-242ENST00000488013 SYT17Q9BSW7 474 aa13.46□□□□□ -0.25
HDLBP-242ENST00000488013 BCL11AQ9H165 835 aa13.46□□□□□ -0.25
HDLBP-242ENST00000488013 TNRC6CQ9HCJ0 1690 aaKnown RBP13.46□□□□□ -0.26
HDLBP-242ENST00000488013 MED23Q9ULK4 1368 aa13.45□□□□□ -0.26
HDLBP-242ENST00000488013 C21orf2O43822 256 aa13.45□□□□□ -0.26
HDLBP-242ENST00000488013 TTC22Q5TAA0 569 aa13.45□□□□□ -0.26
HDLBP-242ENST00000488013 CCDC102BQ68D86 513 aa13.45□□□□□ -0.26
HDLBP-242ENST00000488013 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
HDLBP-242ENST00000488013 FBXO33Q7Z6M2 555 aa13.45□□□□□ -0.26
HDLBP-242ENST00000488013 PDS5AQ29RF7 1337 aaKnown RBP13.44□□□□□ -0.26
HDLBP-242ENST00000488013 G3V3G9 751 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-242ENST00000488013 TTF1Q15361 905 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-242ENST00000488013 WASHC4Q2M389 1173 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 DCAF8Q5TAQ9 597 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 CNTROBQ8N137 903 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 OTUD7AQ8TE49 926 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-242ENST00000488013 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
HDLBP-242ENST00000488013 HAUS7Q99871 368 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 POLLQ9UGP5 575 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 DENND2AQ9ULE3 1009 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 BCS1LQ9Y276 419 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 MYH3P11055 1940 aa13.44□□□□□ -0.26
HDLBP-242ENST00000488013 FRAT2O75474 233 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-242ENST00000488013 ADORA1P30542 326 aa13.43□□□□□ -0.26
HDLBP-242ENST00000488013 FKBP4Q02790 459 aaKnown RBP eCLIP13.43□□□□□ -0.26
HDLBP-242ENST00000488013 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
HDLBP-242ENST00000488013 PI4K2BQ8TCG2 481 aa13.43□□□□□ -0.26
HDLBP-242ENST00000488013 EVI5LQ96CN4 794 aa13.43□□□□□ -0.26
HDLBP-242ENST00000488013 TAOK3Q9H2K8 898 aa13.43□□□□□ -0.26
HDLBP-242ENST00000488013 TLR7Q9NYK1 1049 aaKnown RBP13.43□□□□□ -0.26
HDLBP-242ENST00000488013 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
HDLBP-242ENST00000488013 LTBP3Q9NS15 1303 aa13.42□□□□□ -0.26
HDLBP-242ENST00000488013 HIP1O00291 1037 aa13.42□□□□□ -0.26
HDLBP-242ENST00000488013 BCAMP50895 628 aa13.42□□□□□ -0.26
HDLBP-242ENST00000488013 PODNQ7Z5L7 613 aa13.42□□□□□ -0.26
HDLBP-242ENST00000488013 ZGPATQ8N5A5 531 aaKnown RBP13.42□□□□□ -0.26
HDLBP-242ENST00000488013 IL1R1P14778 569 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 PHKA1P46020 1223 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 GYG1P46976 350 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 KIAA2012Q0VF49 1180 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 SPATA5Q8NB90 893 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 WDR66Q8TBY9 1149 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 BOLA2Q9H3K6 86 aa13.41□□□□□ -0.26
HDLBP-242ENST00000488013 IRS2Q9Y4H2 1338 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 ANKRD31Q8N7Z5 1873 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 ZSCAN25Q6NSZ9 544 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 TDRD7Q8NHU6 1098 aaKnown RBP13.4□□□□□ -0.26
HDLBP-242ENST00000488013 TBC1D22AQ8WUA7 517 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.4□□□□□ -0.26
HDLBP-242ENST00000488013 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 PAG1Q9NWQ8 432 aa13.4□□□□□ -0.26
HDLBP-242ENST00000488013 KIF13BQ9NQT8 1826 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 SNAP23O00161 211 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 PPIP5K2O43314 1243 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 ZFYP08048 801 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-242ENST00000488013 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
HDLBP-242ENST00000488013 SPTY2D1Q68D10 685 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms