RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 LMBR1Q8WVP7 490 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 IFT81Q8WYA0 676 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 PARD3Q8TEW0 1356 aa9.96□□□□□ -0.82
GABRE-209ENST00000486255 ATP2A1O14983 1001 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 POLR3DP05423 398 aaPredicted RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 NLRP6P59044 892 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 UBLCP1Q8WVY7 318 aaPredicted RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.95□□□□□ -0.822e-6■■■■□ 22
GABRE-209ENST00000486255 EFCAB6Q5THR3 1501 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 NEDD9Q14511 834 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 ARFGAP2Q8N6H7 521 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 DDX27Q96GQ7 796 aaKnown RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 TESK2Q96S53 571 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 INO80Q9ULG1 1556 aaPredicted RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 TSNAXIP1Q2TAA8 658 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 TMCO4Q5TGY1 634 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 RGS22Q8NE09 1264 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 C8orf37Q96NL8 207 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 VCXQ9H320 206 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 TCP11L1Q9NUJ3 509 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 CABP1Q9NZU7 370 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 PHACTR2O75167 634 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 TATP17735 454 aaPredicted RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 ERCC3P19447 782 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 KRT83P78385 493 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 DZIP1Q86YF9 867 aaKnown RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 MKNK2Q9HBH9 465 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 EXOC6BQ9Y2D4 811 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 AKAP2Q9Y2D5 859 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 TTC21AQ8NDW8 1320 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 VGLL3A8MV65 326 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 ZNF213O14771 459 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 INPP5BP32019 993 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 CLEC11AQ9Y240 323 aa9.95□□□□□ -0.82
GABRE-209ENST00000486255 PRDM15P57071 1507 aaPredicted RBP9.95□□□□□ -0.82
GABRE-209ENST00000486255 GMNNO75496 209 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 AOPEPQ8N6M6 819 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 ODF2LQ9ULJ1 636 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.94□□□□□ -0.82
GABRE-209ENST00000486255 PPP1R12CQ9BZL4 782 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 NAPBQ9H115 298 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 LMTK2Q8IWU2 1503 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 ATP5DP30049 168 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 KIF5AQ12840 1032 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 ANKRD36BQ8N2N9 1353 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 VIMP08670 466 aaKnown RBP9.94□□□□□ -0.82
GABRE-209ENST00000486255 XRCC6P12956 609 aaKnown RBP eCLIP9.94□□□□□ -0.82
GABRE-209ENST00000486255 SMC1BQ8NDV3 1235 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 ZSCAN22P10073 491 aaPredicted RBP9.94□□□□□ -0.82
GABRE-209ENST00000486255 PTGS1P23219 599 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 IGHMBP2P38935 993 aaKnown RBP9.94□□□□□ -0.82
GABRE-209ENST00000486255 SYKP43405 635 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 KARSQ15046 597 aaKnown RBP9.94□□□□□ -0.82
GABRE-209ENST00000486255 ZNF569Q5MCW4 686 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 CATIPQ7Z7H3 387 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 PANK2Q9BZ23 570 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 TSGA10Q9BZW7 698 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 BOLA2Q9H3K6 86 aa9.94□□□□□ -0.82
GABRE-209ENST00000486255 BTBD11A6QL63 1104 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 SLFN5Q08AF3 891 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 GKAP1Q5VSY0 366 aaPredicted RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 CCDC82Q8N4S0 544 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 ZSCAN16Q9H4T2 348 aaPredicted RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 VAV2P52735 878 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 NBPF14Q5TI25 921 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 FYB2Q5VWT5 728 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 SULT6B1Q6IMI4 303 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 CEP128Q6ZU80 1094 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 ABTB2Q8N961 1025 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 CNPY2Q9Y2B0 182 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 ABCC3O15438 1527 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 IFIT3O14879 490 aaKnown RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 WDHD1O75717 1129 aaPredicted RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 ATP2A2P16615 1042 aaKnown RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 SYNCQ9H7C4 482 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 NPC1L1Q9UHC9 1359 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 KRT86O43790 486 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 CCDC184Q52MB2 194 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 MTRF1LQ9UGC7 380 aaKnown RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 KIF1BO60333 1816 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 YEATS2Q9ULM3 1422 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 RANBP6O60518 1105 aaKnown RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 IFIT1P09914 478 aaKnown RBP9.93□□□□□ -0.82
GABRE-209ENST00000486255 IDEP14735 1019 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 METTL24Q5JXM2 366 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 USP48Q86UV5 1035 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 LMTK3Q96Q04 1460 aa9.93□□□□□ -0.82
GABRE-209ENST00000486255 MYCNP04198 464 aaPredicted RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 ARHGAP31Q2M1Z3 1444 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 SPHKAPQ2M3C7 1700 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 PPP2R3AQ06190 1150 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 FAM200AQ8TCP9 573 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 WASLO00401 505 aaPredicted RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 GJC1P36383 396 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 ERCC6LQ2NKX8 1250 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 FMNL3Q8IVF7 1028 aa9.92□□□□□ -0.82
GABRE-209ENST00000486255 NUDT16Q96DE0 195 aaKnown RBP9.92□□□□□ -0.82
GABRE-209ENST00000486255 EPSTI1Q96J88 318 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms