RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SNX14Q9Y5W7 946 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 TAF5LO75529 589 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 ZAP70P43403 619 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 TFCP2L1Q9NZI6 479 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 COL4A1P02462 1669 aa31.52■■■□□ 2.64
SHOX2-204ENST00000483851 PRR5LQ6MZQ0 368 aa31.51■■■□□ 2.63
SHOX2-204ENST00000483851 ZSCAN25Q6NSZ9 544 aa31.51■■■□□ 2.63
SHOX2-204ENST00000483851 CELF1Q92879 486 aaKnown RBP31.51■■■□□ 2.63
SHOX2-204ENST00000483851 MINPP1Q9UNW1 487 aa31.51■■■□□ 2.63
SHOX2-204ENST00000483851 TNRC6CQ9HCJ0 1690 aaKnown RBP31.51■■■□□ 2.63
SHOX2-204ENST00000483851 PHKA1P46020 1223 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 NEK4P51957 841 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 ST5P78524 1137 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 RNF20Q5VTR2 975 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 DDX24Q9GZR7 859 aaKnown RBP eCLIP31.5■■■□□ 2.63
SHOX2-204ENST00000483851 ANKRD2Q9GZV1 360 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 RBM8AQ9Y5S9 174 aaKnown RBP31.5■■■□□ 2.63
SHOX2-204ENST00000483851 SERPINB2P05120 415 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 ZKSCAN1P17029 563 aaPredicted RBP31.5■■■□□ 2.63
SHOX2-204ENST00000483851 ZNF589Q86UQ0 364 aaPredicted RBP31.5■■■□□ 2.63
SHOX2-204ENST00000483851 TM6SF1Q9BZW5 370 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 MYH7P12883 1935 aa31.5■■■□□ 2.63
SHOX2-204ENST00000483851 HMG20BQ9P0W2 317 aa31.49■■■□□ 2.63
SHOX2-204ENST00000483851 TAF1P21675 1872 aa31.48■■■□□ 2.63
SHOX2-204ENST00000483851 NLGN1Q8N2Q7 840 aa31.48■■■□□ 2.63
SHOX2-204ENST00000483851 KCNJ4P48050 445 aa31.48■■■□□ 2.63
SHOX2-204ENST00000483851 ZNF827Q17R98 1081 aa31.48■■■□□ 2.63
SHOX2-204ENST00000483851 TSGA10IPQ3SY00 556 aa31.46■■■□□ 2.63
SHOX2-204ENST00000483851 U3KPZ7 1027 aaPredicted RBP31.46■■■□□ 2.63
SHOX2-204ENST00000483851 DDIT3P35638 169 aa31.46■■■□□ 2.63
SHOX2-204ENST00000483851 CRY2Q49AN0 593 aa31.46■■■□□ 2.63
SHOX2-204ENST00000483851 CREB3L3Q68CJ9 461 aa31.46■■■□□ 2.63
SHOX2-204ENST00000483851 PRPF40BQ6NWY9 871 aaKnown RBP31.46■■■□□ 2.63
SHOX2-204ENST00000483851 RASEFQ8IZ41 740 aa31.46■■■□□ 2.63
SHOX2-204ENST00000483851 CYP2E1P05181 493 aaPredicted RBP31.45■■■□□ 2.63
SHOX2-204ENST00000483851 SPATA5Q8NB90 893 aa31.45■■■□□ 2.63
SHOX2-204ENST00000483851 DSCC1Q9BVC3 393 aa31.45■■■□□ 2.63
SHOX2-204ENST00000483851 POLRMTO00411 1230 aaKnown RBP31.44■■■□□ 2.62
SHOX2-204ENST00000483851 GRAPQ13588 217 aa31.44■■■□□ 2.62
SHOX2-204ENST00000483851 GRAPLQ8TC17 118 aaPredicted RBP31.44■■■□□ 2.62
SHOX2-204ENST00000483851 ZNF804BA4D1E1 1349 aa31.44■■■□□ 2.62
SHOX2-204ENST00000483851 ZBTB22O15209 634 aa31.44■■■□□ 2.62
SHOX2-204ENST00000483851 APPBP2Q92624 585 aa31.44■■■□□ 2.62
SHOX2-204ENST00000483851 HSP90AA1P07900 732 aaKnown RBP31.43■■■□□ 2.62
SHOX2-204ENST00000483851 CCDC24Q8N4L8 307 aa31.43■■■□□ 2.62
SHOX2-204ENST00000483851 SEC62Q99442 399 aaKnown RBP31.43■■■□□ 2.62
SHOX2-204ENST00000483851 GNL3LQ9NVN8 582 aaKnown RBP31.43■■■□□ 2.62
SHOX2-204ENST00000483851 CIZ1Q9ULV3 898 aaPredicted RBP31.43■■■□□ 2.62
SHOX2-204ENST00000483851 SLC27A2O14975 620 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 PI16Q6UXB8 463 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 COL23A1Q86Y22 540 aaPredicted RBP31.42■■■□□ 2.62
SHOX2-204ENST00000483851 CHMP5Q9NZZ3 219 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 DDR1Q08345 913 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 GSE1Q14687 1217 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 UBE3CQ15386 1083 aa31.42■■■□□ 2.62
SHOX2-204ENST00000483851 MAST3O60307 1309 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 DOCK2Q92608 1830 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 PSMA5P28066 241 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 RASGRF1Q13972 1273 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 CAVIN4Q5BKX8 364 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 NRXN2Q9P2S2 1712 aa31.41■■■□□ 2.62
SHOX2-204ENST00000483851 KLRG2A4D1S0 409 aaPredicted RBP31.4■■■□□ 2.62
SHOX2-204ENST00000483851 SNAP23O00161 211 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 KRT32Q14532 448 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 ADD2P35612 726 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 BCAMP50895 628 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 SPRYD3Q8NCJ5 442 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 RPGRQ92834 1020 aaKnown RBP31.4■■■□□ 2.62
SHOX2-204ENST00000483851 ZSWIM6Q9HCJ5 1215 aa31.4■■■□□ 2.62
SHOX2-204ENST00000483851 CHGBP05060 677 aa31.39■■■□□ 2.62
SHOX2-204ENST00000483851 CCDC129Q6ZRS4 1044 aa31.39■■■□□ 2.62
SHOX2-204ENST00000483851 SEMA3EO15041 775 aa31.38■■■□□ 2.61
SHOX2-204ENST00000483851 OSBP2Q969R2 916 aa31.38■■■□□ 2.61
SHOX2-204ENST00000483851 UPF3BQ9BZI7 483 aaKnown RBP31.38■■■□□ 2.61
SHOX2-204ENST00000483851 RPAP1Q9BWH6 1393 aaPredicted RBP31.38■■■□□ 2.61
SHOX2-204ENST00000483851 HOXA10P31260 410 aaPredicted RBP31.38■■■□□ 2.61
SHOX2-204ENST00000483851 RBM17Q96I25 401 aaKnown RBP31.38■■■□□ 2.61
SHOX2-204ENST00000483851 TTC14Q96N46 770 aa31.38■■■□□ 2.61
SHOX2-204ENST00000483851 PIH1D3Q9NQM4 214 aaKnown RBP31.38■■■□□ 2.61
SHOX2-204ENST00000483851 WASHC4Q2M389 1173 aa31.37■■■□□ 2.61
SHOX2-204ENST00000483851 MAP3K12Q12852 859 aa31.36■■■□□ 2.61
SHOX2-204ENST00000483851 CAMKK2Q96RR4 588 aa31.36■■■□□ 2.61
SHOX2-204ENST00000483851 CYP46A1Q9Y6A2 500 aa31.36■■■□□ 2.61
SHOX2-204ENST00000483851 PNPLA7Q6ZV29 1317 aa31.36■■■□□ 2.61
SHOX2-204ENST00000483851 HSPD1P10809 573 aaKnown RBP31.35■■■□□ 2.61
SHOX2-204ENST00000483851 CASTP20810 708 aaKnown RBP31.35■■■□□ 2.61
SHOX2-204ENST00000483851 SLC9C2Q5TAH2 1124 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 VPS53Q5VIR6 699 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 JAKMIP1Q96N16 626 aaKnown RBP31.35■■■□□ 2.61
SHOX2-204ENST00000483851 LEMD3Q9Y2U8 911 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 PDS5AQ29RF7 1337 aaKnown RBP31.35■■■□□ 2.61
SHOX2-204ENST00000483851 FBXO33Q7Z6M2 555 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 CRAMP1Q96RY5 1269 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 CWC22Q9HCG8 908 aaKnown RBP31.35■■■□□ 2.61
SHOX2-204ENST00000483851 QSER1Q2KHR3 1735 aa31.35■■■□□ 2.61
SHOX2-204ENST00000483851 M0R2C6 588 aa31.34■■■□□ 2.61
SHOX2-204ENST00000483851 IDH1O75874 414 aaKnown RBP31.34■■■□□ 2.61
SHOX2-204ENST00000483851 RUFY3Q7L099 469 aa31.34■■■□□ 2.61
SHOX2-204ENST00000483851 BBOX1O75936 387 aa31.33■■■□□ 2.61
SHOX2-204ENST00000483851 TMC4Q7Z404 712 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms