RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SH2B1Q9NRF2 756 aaPredicted RBP15.83■□□□□ 0.12
CPNE1-225ENST00000483495 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
CPNE1-225ENST00000483495 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
CPNE1-225ENST00000483495 TRAK2O60296 914 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 SLC5A1P13866 664 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 RPS6KB1P23443 525 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 OSBP2Q969R2 916 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 AKAP11Q9UKA4 1901 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 BRD1O95696 1058 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 CYP21A2P08686 494 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 HSPD1P10809 573 aaKnown RBP15.82■□□□□ 0.12
CPNE1-225ENST00000483495 TTF1Q15361 905 aaPredicted RBP15.82■□□□□ 0.12
CPNE1-225ENST00000483495 CDC5LQ99459 802 aaKnown RBP15.82■□□□□ 0.12
CPNE1-225ENST00000483495 NYXQ9GZU5 481 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 TAF1LQ8IZX4 1826 aa15.82■□□□□ 0.12
CPNE1-225ENST00000483495 M0R2C6 588 aa15.81■□□□□ 0.12
CPNE1-225ENST00000483495 PHKA1P46020 1223 aa15.81■□□□□ 0.12
CPNE1-225ENST00000483495 ANKRD1Q15327 319 aa15.81■□□□□ 0.12
CPNE1-225ENST00000483495 PI16Q6UXB8 463 aa15.81■□□□□ 0.12
CPNE1-225ENST00000483495 HELBQ8NG08 1087 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-225ENST00000483495 APPBP2Q92624 585 aa15.81■□□□□ 0.12
CPNE1-225ENST00000483495 QTRT2Q9H974 415 aaKnown RBP15.81■□□□□ 0.12
CPNE1-225ENST00000483495 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.81■□□□□ 0.12
CPNE1-225ENST00000483495 ZPR1O75312 459 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 COL9A3Q14050 684 aaPredicted RBP15.8■□□□□ 0.12
CPNE1-225ENST00000483495 SMIM5Q71RC9 77 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.8■□□□□ 0.123e-7■■■■□ 23.5
CPNE1-225ENST00000483495 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
CPNE1-225ENST00000483495 C4BP0C0L5 1744 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 GOLGA6L22H0YM25 854 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 LARGE1O95461 756 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 ZSCAN25Q6NSZ9 544 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 C3orf67Q6ZVT6 689 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 ARHGEF1Q92888 912 aaKnown RBP15.8■□□□□ 0.12
CPNE1-225ENST00000483495 NEK1Q96PY6 1258 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 SETDB2Q96T68 719 aa15.8■□□□□ 0.12
CPNE1-225ENST00000483495 CHRNDQ07001 517 aa15.79■□□□□ 0.12
CPNE1-225ENST00000483495 SKOR2Q2VWA4 1001 aaPredicted RBP15.79■□□□□ 0.12
CPNE1-225ENST00000483495 ADD2P35612 726 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 TOB2Q14106 344 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-225ENST00000483495 ME3Q16798 604 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 LARP6Q9BRS8 491 aaKnown RBP15.78■□□□□ 0.12
CPNE1-225ENST00000483495 BSDC1Q9NW68 430 aaPredicted RBP15.78■□□□□ 0.12
CPNE1-225ENST00000483495 TPCN1Q9ULQ1 816 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 COL4A1P02462 1669 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 FOXP2O15409 715 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 HMGB1P09429 215 aaKnown RBP15.78■□□□□ 0.12
CPNE1-225ENST00000483495 ST3GAL1Q11201 340 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 UBE3CQ15386 1083 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 ANKRD18AQ8IVF6 992 aa15.78■□□□□ 0.12
CPNE1-225ENST00000483495 PIH1D3Q9NQM4 214 aaKnown RBP15.78■□□□□ 0.12
CPNE1-225ENST00000483495 ADRA2BP18089 450 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 WASHC4Q2M389 1173 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 FAM196AQ6ZSG2 479 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 STOX1Q6ZVD7 989 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 SPATA5Q8NB90 893 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 PUS7LQ9H0K6 701 aaKnown RBP15.77■□□□□ 0.11
CPNE1-225ENST00000483495 LRRC4BQ9NT99 713 aa15.77■□□□□ 0.11
CPNE1-225ENST00000483495 SNAP23O00161 211 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 GTF2E1P29083 439 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-225ENST00000483495 RASGRF1Q13972 1273 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 TPTE2Q6XPS3 522 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 NBPF5PQ86XG9 351 aaPredicted RBP15.76■□□□□ 0.11
CPNE1-225ENST00000483495 CTNNA3Q9UI47 895 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 C4AP0C0L4 1744 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
CPNE1-225ENST00000483495 CCDC83Q8IWF9 413 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 SMC3Q9UQE7 1217 aa15.76■□□□□ 0.11
CPNE1-225ENST00000483495 MYH7P12883 1935 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 TCRBV5S4A2TA0A5A2 114 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 RFC4P35249 363 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 UBE4AQ14139 1066 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 SLC27A3Q5K4L6 730 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 SLC9C2Q5TAH2 1124 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 NLRP3Q96P20 1036 aa15.75■□□□□ 0.11
CPNE1-225ENST00000483495 ZNF804BA4D1E1 1349 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 E7EWF7 191 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 GPAA1O43292 621 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 PDE6AP16499 860 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 MCTP1Q6DN14 999 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 DHX32Q7L7V1 743 aaKnown RBP15.74■□□□□ 0.11
CPNE1-225ENST00000483495 KRT27Q7Z3Y8 459 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 TCEANC2Q96MN5 208 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 AGXT2Q9BYV1 514 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 CASZ1Q86V15 1759 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 BCAMP50895 628 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 EXOSC10Q01780 885 aaKnown RBP15.74■□□□□ 0.11
CPNE1-225ENST00000483495 LMBRD1Q9NUN5 540 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 MINPP1Q9UNW1 487 aa15.74■□□□□ 0.11
CPNE1-225ENST00000483495 IDH1O75874 414 aaKnown RBP15.73■□□□□ 0.11
CPNE1-225ENST00000483495 FGAP02671 866 aa15.73■□□□□ 0.11
CPNE1-225ENST00000483495 PDIA4P13667 645 aaKnown RBP15.73■□□□□ 0.11
CPNE1-225ENST00000483495 FBXL16Q8N461 479 aa15.73■□□□□ 0.11
CPNE1-225ENST00000483495 CELF1Q92879 486 aaKnown RBP15.73■□□□□ 0.11
CPNE1-225ENST00000483495 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
CPNE1-225ENST00000483495 A0A1B0GUL6 1792 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms