RNA–Protein interactions for RNA: ENST00000483412.5

CDK5RAP2-216, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 6,235 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-216ENST00000483412 IKBKGQ9Y6K9 419 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CETN1Q12798 172 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ZNF444Q8N0Y2 327 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 FAM76AQ8TAV0 307 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 UBA7P41226 1012 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DAAM2Q86T65 1068 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ZGPATQ8N5A5 531 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 RBSNQ9H1K0 784 aa10.88□□□□□ -0.67
CDK5RAP2-216ENST00000483412 C19orf44Q9H6X5 657 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 IFNKQ9P0W0 207 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 MAP3K2Q9Y2U5 619 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KLF18A0A0U1RQI7 1052 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 RSRC1Q96IZ7 334 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ZNF652Q9Y2D9 606 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ARHGEF5Q12774 1597 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 IFIT5Q13325 482 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 NAA25Q14CX7 972 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 Q6ZUG5 572 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PUS7Q96PZ0 661 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PSMD1Q99460 953 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 GUCA1BQ9UMX6 200 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SLC5A1P13866 664 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DBF4Q9UBU7 674 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TBX22Q9Y458 520 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 NPATQ14207 1427 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 RIOK3O14730 519 aaKnown RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KRT13P13646 458 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 FERMT2Q96AC1 680 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ALG1Q9BT22 464 aa10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 STMN4Q9H169 189 aaPredicted RBP10.87□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SMIM23A6NLE4 172 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 STAT6P42226 847 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CPLX4Q7Z7G2 160 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DZIP1Q86YF9 867 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 UBAP1LF5GYI3 381 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ZPR1O75312 459 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 IFT81Q8WYA0 676 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 A0A1W2PP64 1363 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TOM1O60784 492 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PPP2R3AQ06190 1150 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CUL5Q93034 780 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 ERO1AQ96HE7 468 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 UHRF1BP1Q6BDS2 1440 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TERF1P54274 439 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PDE1AP54750 535 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 EVCP57679 992 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KRT83P78385 493 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PPP4R3AQ6IN85 833 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 C16orf71Q8IYS4 520 aaPredicted RBP10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TRPM2O94759 1503 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 FERP16591 822 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 UTP14AQ9BVJ6 771 aaKnown RBP10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SNRKQ9NRH2 765 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CEP83Q9Y592 693 aa10.86□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SEC24BO95487 1268 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 EIF4A2Q14240 407 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 MFSD6Q6ZSS7 791 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KRT86O43790 486 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CRACR2BQ8N4Y2 399 aaPredicted RBP10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DDX12PQ92771 950 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 POLKQ9UBT6 870 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PARD3Q8TEW0 1356 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SYCP3Q8IZU3 236 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TBC1D5Q92609 795 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 IL16Q14005 1332 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KIF5BP33176 963 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TUBB4BP68371 445 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SPAG1Q07617 926 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 RHPN1Q8TCX5 695 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KIF5AQ12840 1032 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 IQCGQ9H095 443 aaKnown RBP10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 VAT1LQ9HCJ6 419 aa10.85□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DHX58Q96C10 678 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TSNARE1Q96NA8 513 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 YEATS2Q9ULM3 1422 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 VGLL3A8MV65 326 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 AK2P54819 239 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TTC14Q96N46 770 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SPAG5Q96R06 1193 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 CARD14Q9BXL6 1004 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 HMGB2P26583 209 aaKnown RBP10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TTF1Q15361 905 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 C17orf53Q8N3J3 647 aaPredicted RBP10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 LRRC27Q9C0I9 530 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 KAT14Q9H8E8 782 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 GCC2Q8IWJ2 1684 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 TMEM110-MUSTN1A8MSY1 372 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 UBXN1Q04323 297 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 MYRIPQ8NFW9 859 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 DNAI2Q9GZS0 605 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 SAMD15Q9P1V8 674 aa10.84□□□□□ -0.67
CDK5RAP2-216ENST00000483412 MEIS3Q99687 375 aa10.83□□□□□ -0.67
CDK5RAP2-216ENST00000483412 PIK3R4Q99570 1358 aa10.83□□□□□ -0.68
CDK5RAP2-216ENST00000483412 SPTLC2O15270 562 aa10.83□□□□□ -0.68
CDK5RAP2-216ENST00000483412 SLC4A8Q2Y0W8 1093 aa10.83□□□□□ -0.68
CDK5RAP2-216ENST00000483412 DDX46Q7L014 1031 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP2-216ENST00000483412 APBB1IPQ7Z5R6 666 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms