RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 GLIS2Q9BZE0 524 aaPredicted RBP29.6■■■□□ 2.33
RHBDF1-208ENST00000482904 NOB1Q9ULX3 412 aaKnown RBP29.6■■■□□ 2.33
RHBDF1-208ENST00000482904 ZNF609O15014 1411 aa29.6■■■□□ 2.33
RHBDF1-208ENST00000482904 FMR1Q06787 632 aaKnown RBP eCLIP29.59■■■□□ 2.33
RHBDF1-208ENST00000482904 KAZALD1Q96I82 304 aa29.59■■■□□ 2.33
RHBDF1-208ENST00000482904 API5Q9BZZ5 524 aaKnown RBP29.59■■■□□ 2.33
RHBDF1-208ENST00000482904 KIF16BQ96L93 1317 aa29.58■■■□□ 2.33
RHBDF1-208ENST00000482904 PGAP2Q9UHJ9 254 aa29.58■■■□□ 2.33
RHBDF1-208ENST00000482904 PLIN1O60240 522 aa29.57■■■□□ 2.32
RHBDF1-208ENST00000482904 EGFRP00533 1210 aa29.57■■■□□ 2.32
RHBDF1-208ENST00000482904 RARSP54136 660 aaKnown RBP29.57■■■□□ 2.32
RHBDF1-208ENST00000482904 PSME4Q14997 1843 aa29.57■■■□□ 2.32
RHBDF1-208ENST00000482904 CDC37L1Q7L3B6 337 aa29.56■■■□□ 2.32
RHBDF1-208ENST00000482904 A0A1B0GUL6 1792 aa29.55■■■□□ 2.32
RHBDF1-208ENST00000482904 SNAP23O00161 211 aa29.55■■■□□ 2.32
RHBDF1-208ENST00000482904 USP17L8P0C7I0 530 aa29.55■■■□□ 2.32
RHBDF1-208ENST00000482904 RABL6Q3YEC7 729 aaPredicted RBP29.55■■■□□ 2.32
RHBDF1-208ENST00000482904 USP44Q9H0E7 712 aa29.55■■■□□ 2.32
RHBDF1-208ENST00000482904 MYO3BQ8WXR4 1341 aa29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 BRPF1P55201 1214 aaPredicted RBP29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 STRIP1Q5VSL9 837 aa29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 ZNF804AQ7Z570 1209 aa29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 ANKRD44Q8N8A2 993 aa29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 DCPSQ96C86 337 aaKnown RBP29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 ZNF408Q9H9D4 720 aa29.54■■■□□ 2.32
RHBDF1-208ENST00000482904 CELF2O95319 508 aaKnown RBP29.53■■■□□ 2.32
RHBDF1-208ENST00000482904 ZNF280AP59817 542 aaPredicted RBP29.53■■■□□ 2.32
RHBDF1-208ENST00000482904 DACT2Q5SW24 774 aa29.53■■■□□ 2.32
RHBDF1-208ENST00000482904 PAXIP1Q6ZW49 1069 aaPredicted RBP29.53■■■□□ 2.32
RHBDF1-208ENST00000482904 RASSF10A6NK89 507 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 KRT26Q7Z3Y9 468 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 USP48Q86UV5 1035 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 GMLQ99445 158 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 MXD3Q9BW11 206 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 GGA3Q9NZ52 723 aa29.52■■■□□ 2.32
RHBDF1-208ENST00000482904 UBTFL1P0CB47 393 aaPredicted RBP29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 DEFB115Q30KQ5 88 aa29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 OGFOD1Q8N543 542 aa29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 PUS3Q9BZE2 481 aaKnown RBP29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 CD209Q9NNX6 404 aa29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 MYOZ2Q9NPC6 264 aa29.51■■■□□ 2.31
RHBDF1-208ENST00000482904 VEGFBP49765 207 aa29.5■■■□□ 2.31
RHBDF1-208ENST00000482904 GTF2IP78347 998 aa29.5■■■□□ 2.31
RHBDF1-208ENST00000482904 CST9Q5W186 159 aa29.5■■■□□ 2.31
RHBDF1-208ENST00000482904 TTLL5Q6EMB2 1281 aa29.5■■■□□ 2.31
RHBDF1-208ENST00000482904 C15orf52Q6ZUT6 534 aaKnown RBP29.5■■■□□ 2.31
RHBDF1-208ENST00000482904 MROH5Q6ZUA9 1318 aa29.49■■■□□ 2.31
RHBDF1-208ENST00000482904 TRPM7Q96QT4 1865 aa29.48■■■□□ 2.31
RHBDF1-208ENST00000482904 IRS2Q9Y4H2 1338 aa29.48■■■□□ 2.31
RHBDF1-208ENST00000482904 HSPA1AP0DMV8 641 aaKnown RBP29.48■■■□□ 2.31
RHBDF1-208ENST00000482904 HSPA1BP0DMV9 641 aaKnown RBP29.48■■■□□ 2.31
RHBDF1-208ENST00000482904 SULF1Q8IWU6 871 aa29.48■■■□□ 2.31
RHBDF1-208ENST00000482904 ADM5C9JUS6 153 aa29.47■■■□□ 2.31
RHBDF1-208ENST00000482904 SCARF1Q14162 830 aa29.47■■■□□ 2.31
RHBDF1-208ENST00000482904 METTL24Q5JXM2 366 aa29.47■■■□□ 2.31
RHBDF1-208ENST00000482904 TLL2Q9Y6L7 1015 aa29.47■■■□□ 2.31
RHBDF1-208ENST00000482904 ASTN2O75129 1339 aaPredicted RBP29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 GRM1Q13255 1194 aa29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 UBE4AQ14139 1066 aa29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 ANGEL2Q5VTE6 544 aaKnown RBP29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 KLHDC4Q8TBB5 520 aa29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 ARHGAP45Q92619 1136 aa29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 FRAT1Q92837 279 aaPredicted RBP29.46■■■□□ 2.31
RHBDF1-208ENST00000482904 IPO8O15397 1037 aaKnown RBP29.45■■■□□ 2.31
RHBDF1-208ENST00000482904 KIAA0825Q8IV33 1275 aa29.45■■■□□ 2.31
RHBDF1-208ENST00000482904 HDAC9Q9UKV0 1011 aa29.45■■■□□ 2.31
RHBDF1-208ENST00000482904 RIPOR2Q9Y4F9 1068 aa29.45■■■□□ 2.31
RHBDF1-208ENST00000482904 ZNF646O15015 1829 aaPredicted RBP29.45■■■□□ 2.3
RHBDF1-208ENST00000482904 LRRC24Q50LG9 513 aa29.44■■■□□ 2.3
RHBDF1-208ENST00000482904 HDAC5Q9UQL6 1122 aa29.44■■■□□ 2.3
RHBDF1-208ENST00000482904 IL1R1P14778 569 aa29.43■■■□□ 2.3
RHBDF1-208ENST00000482904 DLK2Q6UY11 383 aa29.43■■■□□ 2.3
RHBDF1-208ENST00000482904 WDR33Q9C0J8 1336 aaKnown RBP29.43■■■□□ 2.3
RHBDF1-208ENST00000482904 BCAR3O75815 825 aa29.42■■■□□ 2.3
RHBDF1-208ENST00000482904 ECE1P42892 770 aa29.42■■■□□ 2.3
RHBDF1-208ENST00000482904 CAPNS2Q96L46 248 aa29.42■■■□□ 2.3
RHBDF1-208ENST00000482904 ZBED9Q6R2W3 1325 aa29.42■■■□□ 2.3
RHBDF1-208ENST00000482904 SAPCD2Q86UD0 394 aa29.41■■■□□ 2.3
RHBDF1-208ENST00000482904 JAG2Q9Y219 1238 aa29.41■■■□□ 2.3
RHBDF1-208ENST00000482904 LRRFIP2Q9Y608 721 aaKnown RBP29.41■■■□□ 2.3
RHBDF1-208ENST00000482904 SASH1O94885 1247 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 HIBADHP31937 336 aaKnown RBP29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 GYG1P46976 350 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 MMP14P50281 582 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 CYP4F22Q6NT55 531 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 VPS37DQ86XT2 251 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 MEIS3Q99687 375 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 PITPNM2Q9BZ72 1349 aa29.4■■■□□ 2.3
RHBDF1-208ENST00000482904 TRIM27P14373 513 aa29.39■■■□□ 2.3
RHBDF1-208ENST00000482904 NBPF9Q3BBW0 867 aa29.39■■■□□ 2.3
RHBDF1-208ENST00000482904 INTS3Q68E01 1043 aaKnown RBP29.39■■■□□ 2.3
RHBDF1-208ENST00000482904 ATF7IPQ6VMQ6 1270 aa29.39■■■□□ 2.3
RHBDF1-208ENST00000482904 AIDAQ96BJ3 306 aa29.39■■■□□ 2.3
RHBDF1-208ENST00000482904 CDCA5Q96FF9 252 aa29.38■■■□□ 2.29
RHBDF1-208ENST00000482904 F8W031 263 aaPredicted RBP29.37■■■□□ 2.29
RHBDF1-208ENST00000482904 EYA2O00167 538 aa29.37■■■□□ 2.29
RHBDF1-208ENST00000482904 PDE8BO95263 885 aa29.37■■■□□ 2.29
RHBDF1-208ENST00000482904 GNAI3P08754 354 aa29.37■■■□□ 2.29
RHBDF1-208ENST00000482904 RFX5P48382 616 aaPredicted RBP29.37■■■□□ 2.29
RHBDF1-208ENST00000482904 CERS5Q8N5B7 392 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms