RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 IL15P40933 162 aaPredicted RBP26■■□□□ 1.75
SEC13-217ENST00000482647 KCNQ5Q9NR82 932 aa26■■□□□ 1.75
SEC13-217ENST00000482647 HACL1Q9UJ83 578 aa26■■□□□ 1.75
SEC13-217ENST00000482647 PA2G4Q9UQ80 394 aaKnown RBP26■■□□□ 1.75
SEC13-217ENST00000482647 PNMA6EA0A0J9YXQ4 647 aa25.99■■□□□ 1.75
SEC13-217ENST00000482647 PSMD14O00487 310 aa25.99■■□□□ 1.75
SEC13-217ENST00000482647 LMOD1P29536 600 aaPredicted RBP25.99■■□□□ 1.75
SEC13-217ENST00000482647 VGLL2Q8N8G2 317 aa25.99■■□□□ 1.75
SEC13-217ENST00000482647 TOMM70O94826 608 aa25.98■■□□□ 1.75
SEC13-217ENST00000482647 RRP1P56182 461 aaKnown RBP25.98■■□□□ 1.75
SEC13-217ENST00000482647 ZNF804AQ7Z570 1209 aa25.98■■□□□ 1.75
SEC13-217ENST00000482647 ZBTB40Q9NUA8 1239 aa25.98■■□□□ 1.75
SEC13-217ENST00000482647 CEP126Q9P2H0 1117 aa25.98■■□□□ 1.75
SEC13-217ENST00000482647 WDR90Q96KV7 1748 aa25.97■■□□□ 1.75
SEC13-217ENST00000482647 IRS2Q9Y4H2 1338 aa25.97■■□□□ 1.75
SEC13-217ENST00000482647 GMPSP49915 693 aaPredicted RBP25.97■■□□□ 1.75
SEC13-217ENST00000482647 PUM3Q15397 648 aaKnown RBP25.97■■□□□ 1.75
SEC13-217ENST00000482647 TAF1DQ9H5J8 278 aaPredicted RBP25.97■■□□□ 1.75
SEC13-217ENST00000482647 USP17L3A6NCW0 530 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 USP17L4A6NCW7 530 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 VIL1P09327 827 aaKnown RBP25.96■■□□□ 1.75
SEC13-217ENST00000482647 SCNN1DP51172 638 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 POLA2Q14181 598 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 USP17L1Q7RTZ2 530 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 SSH3Q8TE77 659 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 CD209Q9NNX6 404 aa25.96■■□□□ 1.75
SEC13-217ENST00000482647 RPS12P25398 132 aaKnown RBP25.95■■□□□ 1.74
SEC13-217ENST00000482647 EPHX2P34913 555 aa25.95■■□□□ 1.74
SEC13-217ENST00000482647 GPRC5DQ9NZD1 345 aa25.95■■□□□ 1.74
SEC13-217ENST00000482647 HIBADHP31937 336 aaKnown RBP25.94■■□□□ 1.74
SEC13-217ENST00000482647 G3BP1Q13283 466 aaKnown RBP eCLIP25.94■■□□□ 1.749e-9■□□□□ 8.3
SEC13-217ENST00000482647 CEP85Q6P2H3 762 aa25.94■■□□□ 1.74
SEC13-217ENST00000482647 DPF2Q92785 391 aa25.94■■□□□ 1.74
SEC13-217ENST00000482647 ZBTB12Q9Y330 459 aaPredicted RBP25.94■■□□□ 1.74
SEC13-217ENST00000482647 IFIT1P09914 478 aaKnown RBP25.93■■□□□ 1.74
SEC13-217ENST00000482647 EPS15P42566 896 aa25.93■■□□□ 1.74
SEC13-217ENST00000482647 CAVIN4Q5BKX8 364 aa25.93■■□□□ 1.74
SEC13-217ENST00000482647 STRIP1Q5VSL9 837 aa25.93■■□□□ 1.74
SEC13-217ENST00000482647 PNMA8AQ86V59 439 aaPredicted RBP25.93■■□□□ 1.74
SEC13-217ENST00000482647 RBM46Q8TBY0 533 aaKnown RBP25.93■■□□□ 1.74
SEC13-217ENST00000482647 LPIN2Q92539 896 aa25.93■■□□□ 1.74
SEC13-217ENST00000482647 IL1R1P14778 569 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 FGFR2P21802 821 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 GYG1P46976 350 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 TTLL5Q6EMB2 1281 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 RSBN1LQ6PCB5 846 aaPredicted RBP25.92■■□□□ 1.74
SEC13-217ENST00000482647 VPS37DQ86XT2 251 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 FBXW7Q969H0 707 aa25.92■■□□□ 1.74
SEC13-217ENST00000482647 FAM84BQ96KN1 310 aaPredicted RBP25.92■■□□□ 1.74
SEC13-217ENST00000482647 SLC5A1P13866 664 aa25.91■■□□□ 1.74
SEC13-217ENST00000482647 C1QTNF8P60827 252 aa25.91■■□□□ 1.74
SEC13-217ENST00000482647 RPAP2Q8IXW5 612 aaPredicted RBP25.91■■□□□ 1.74
SEC13-217ENST00000482647 AGBL3Q8NEM8 1001 aa25.91■■□□□ 1.74
SEC13-217ENST00000482647 CNOT7Q9UIV1 285 aaKnown RBP25.91■■□□□ 1.74
SEC13-217ENST00000482647 H7C1D1 291 aa25.9■■□□□ 1.74
SEC13-217ENST00000482647 SURF6O75683 361 aaKnown RBP25.9■■□□□ 1.74
SEC13-217ENST00000482647 ATP2B3Q16720 1220 aa25.9■■□□□ 1.74
SEC13-217ENST00000482647 EAPPQ56P03 285 aaPredicted RBP25.9■■□□□ 1.74
SEC13-217ENST00000482647 FBXO33Q7Z6M2 555 aa25.9■■□□□ 1.74
SEC13-217ENST00000482647 ADARB2Q9NS39 739 aaKnown RBP25.9■■□□□ 1.74
SEC13-217ENST00000482647 GTF2IP78347 998 aa25.89■■□□□ 1.74
SEC13-217ENST00000482647 TFCP2Q12800 502 aa25.89■■□□□ 1.74
SEC13-217ENST00000482647 DACT2Q5SW24 774 aa25.89■■□□□ 1.74
SEC13-217ENST00000482647 SMC1BQ8NDV3 1235 aa25.89■■□□□ 1.74
SEC13-217ENST00000482647 AKAP2Q9Y2D5 859 aa25.89■■□□□ 1.74
SEC13-217ENST00000482647 SASH1O94885 1247 aa25.88■■□□□ 1.73
SEC13-217ENST00000482647 OS9Q13438 667 aaPredicted RBP25.88■■□□□ 1.73
SEC13-217ENST00000482647 USP50Q70EL3 339 aaPredicted RBP25.88■■□□□ 1.73
SEC13-217ENST00000482647 LDHDQ86WU2 507 aa25.88■■□□□ 1.73
SEC13-217ENST00000482647 MICALL2Q8IY33 904 aa25.88■■□□□ 1.73
SEC13-217ENST00000482647 TDRD7Q8NHU6 1098 aaKnown RBP25.88■■□□□ 1.73
SEC13-217ENST00000482647 NOP58Q9Y2X3 529 aaKnown RBP25.88■■□□□ 1.73
SEC13-217ENST00000482647 SCN4AP35499 1836 aa25.87■■□□□ 1.73
SEC13-217ENST00000482647 HMMRO75330 724 aa25.87■■□□□ 1.73
SEC13-217ENST00000482647 BCAMP50895 628 aa25.87■■□□□ 1.73
SEC13-217ENST00000482647 FSTL1Q12841 308 aa25.87■■□□□ 1.73
SEC13-217ENST00000482647 MYO3BQ8WXR4 1341 aa25.87■■□□□ 1.73
SEC13-217ENST00000482647 GMLQ99445 158 aa25.86■■□□□ 1.73
SEC13-217ENST00000482647 CLEC11AQ9Y240 323 aa25.86■■□□□ 1.73
SEC13-217ENST00000482647 A0A1B0GUL6 1792 aa25.86■■□□□ 1.73
SEC13-217ENST00000482647 USP17L8P0C7I0 530 aa25.85■■□□□ 1.73
SEC13-217ENST00000482647 CHADLQ6NUI6 762 aa25.85■■□□□ 1.73
SEC13-217ENST00000482647 SCN9AQ15858 1988 aa25.84■■□□□ 1.73
SEC13-217ENST00000482647 ZNF609O15014 1411 aa25.84■■□□□ 1.73
SEC13-217ENST00000482647 FRAT2O75474 233 aaPredicted RBP25.84■■□□□ 1.73
SEC13-217ENST00000482647 POTEIP0CG38 1075 aa25.84■■□□□ 1.73
SEC13-217ENST00000482647 POTEJP0CG39 1038 aa25.84■■□□□ 1.73
SEC13-217ENST00000482647 MXD3Q9BW11 206 aa25.84■■□□□ 1.73
SEC13-217ENST00000482647 SHTN1A0MZ66 631 aa25.83■■□□□ 1.73
SEC13-217ENST00000482647 TIMM10P62072 90 aa25.83■■□□□ 1.73
SEC13-217ENST00000482647 OGFOD1Q8N543 542 aa25.83■■□□□ 1.73
SEC13-217ENST00000482647 FAM205AQ6ZU69 1335 aa25.83■■□□□ 1.73
SEC13-217ENST00000482647 A0A1B0GUL7 405 aa25.82■■□□□ 1.72
SEC13-217ENST00000482647 MMP14P50281 582 aa25.82■■□□□ 1.72
SEC13-217ENST00000482647 ZNF280AP59817 542 aaPredicted RBP25.82■■□□□ 1.72
SEC13-217ENST00000482647 FKBP1AP62942 108 aaKnown RBP25.82■■□□□ 1.72
SEC13-217ENST00000482647 HSP90AB4PQ58FF6 505 aa25.82■■□□□ 1.72
SEC13-217ENST00000482647 SIRT2Q8IXJ6 389 aa25.82■■□□□ 1.72
SEC13-217ENST00000482647 NEUROD6Q96NK8 337 aa25.82■■□□□ 1.72
SEC13-217ENST00000482647 GNL3LQ9NVN8 582 aaKnown RBP25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms