RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 PMEPA1Q969W9 287 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 EAF1Q96JC9 268 aaPredicted RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 TMEM74Q96NL1 305 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 SRPK1Q96SB4 655 aaKnown RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
COPA-203ENST00000481040 BRINP2Q9C0B6 783 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 GINM1Q9NU53 330 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 STRIP2Q9ULQ0 834 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 TRAK1Q9UPV9 953 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 MRVI1Q9Y6F6 885 aa7.58□□□□□ -1.2
COPA-203ENST00000481040 ADAMTS2O95450 1211 aa7.57□□□□□ -1.2
COPA-203ENST00000481040 MAP3K10Q02779 954 aa7.57□□□□□ -1.2
COPA-203ENST00000481040 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
COPA-203ENST00000481040 GLIS3Q8NEA6 775 aa7.57□□□□□ -1.2
COPA-203ENST00000481040 ZNF296Q8WUU4 475 aaPredicted RBP7.57□□□□□ -1.2
COPA-203ENST00000481040 TRIM55Q9BYV6 548 aa7.57□□□□□ -1.2
COPA-203ENST00000481040 ABI2Q9NYB9 513 aaPredicted RBP7.57□□□□□ -1.2
COPA-203ENST00000481040 SPATA31C2B4DYI2 1134 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 KLF4O43474 513 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 XYLBO75191 536 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 THBS1P07996 1170 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 EPB42P16452 691 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 GRNP28799 593 aaKnown RBP7.56□□□□□ -1.2
COPA-203ENST00000481040 SOX9P48436 509 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 LRRC69Q6ZNQ3 347 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 ZCRB1Q8TBF4 217 aaKnown RBP7.56□□□□□ -1.2
COPA-203ENST00000481040 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
COPA-203ENST00000481040 ZIC5Q96T25 663 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 NT5C1AQ9BXI3 368 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 EHD4Q9H223 541 aa7.56□□□□□ -1.2
COPA-203ENST00000481040 NOP58Q9Y2X3 529 aaKnown RBP7.56□□□□□ -1.2
COPA-203ENST00000481040 A0A1W2PP55 124 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 U2SURPO15042 1029 aaKnown RBP7.55□□□□□ -1.2
COPA-203ENST00000481040 RLBP1P12271 317 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 ATP4AP20648 1035 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 CES1P23141 567 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 FCGRTP55899 365 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 ANAPC15P60006 121 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 COL9A2Q14055 689 aaPredicted RBP7.55□□□□□ -1.2
COPA-203ENST00000481040 RAB33AQ14088 237 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 NOL8Q76FK4 1167 aaKnown RBP7.55□□□□□ -1.2
COPA-203ENST00000481040 NLRP13Q86W25 1043 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 ANKRD24Q8TF21 1146 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 HNRNPLLQ8WVV9 542 aaKnown RBP7.55□□□□□ -1.2
COPA-203ENST00000481040 POLR3GLQ9BT43 218 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 SNTG2Q9NY99 539 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 PPM1HQ9ULR3 514 aa7.55□□□□□ -1.2
COPA-203ENST00000481040 EGFRP00533 1210 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 RASSF7Q02833 373 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
COPA-203ENST00000481040 TTC39BQ5VTQ0 682 aaPredicted RBP7.54□□□□□ -1.2
COPA-203ENST00000481040 FBXL19Q6PCT2 694 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 TRIM22Q8IYM9 498 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 CPLX3Q8WVH0 158 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 OXCT2Q9BYC2 517 aaPredicted RBP7.54□□□□□ -1.2
COPA-203ENST00000481040 KCNQ5Q9NR82 932 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 LATS2Q9NRM7 1088 aa7.54□□□□□ -1.2
COPA-203ENST00000481040 EDN3P14138 238 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
COPA-203ENST00000481040 TYRO3Q06418 890 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 MAP3K11Q16584 847 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 PRPF40BQ6NWY9 871 aaKnown RBP7.53□□□□□ -1.2
COPA-203ENST00000481040 SV2BQ7L1I2 683 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 RHOVQ96L33 236 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 METTL14Q9HCE5 456 aaKnown RBP7.53□□□□□ -1.2
COPA-203ENST00000481040 IFT57Q9NWB7 429 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 PRKAG3Q9UGI9 489 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 AKAP2Q9Y2D5 859 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 SUPT16HQ9Y5B9 1047 aaKnown RBP7.53□□□□□ -1.2
COPA-203ENST00000481040 COL4A3BPQ9Y5P4 624 aa7.53□□□□□ -1.2
COPA-203ENST00000481040 FAM221BA6H8Z2 402 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 GREM1O60565 184 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 CELA2BP08218 269 aaPredicted RBP7.52□□□□□ -1.21
COPA-203ENST00000481040 FAM160A1Q05DH4 1040 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 RASA3Q14644 834 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 PLEKHG4Q58EX7 1191 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 PEAR1Q5VY43 1037 aaPredicted RBP7.52□□□□□ -1.21
COPA-203ENST00000481040 RIPOR1Q6ZS17 1223 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 LRP10Q7Z4F1 713 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 PHC3Q8NDX5 983 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 GTPBP3Q969Y2 492 aaKnown RBP7.52□□□□□ -1.21
COPA-203ENST00000481040 ANAPC16Q96DE5 110 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 CEP63Q96MT8 703 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 GAS2L1Q99501 681 aaPredicted RBP7.52□□□□□ -1.21
COPA-203ENST00000481040 C11orf16Q9NQ32 467 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 R3HCC1Q9Y3T6 440 aaKnown RBP7.52□□□□□ -1.21
COPA-203ENST00000481040 DYRK1BQ9Y463 629 aa7.52□□□□□ -1.21
COPA-203ENST00000481040 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 FBXO24O75426 580 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 CYP2E1P05181 493 aaPredicted RBP7.51□□□□□ -1.21
COPA-203ENST00000481040 GARTP22102 1010 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 WDR44Q5JSH3 913 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 PCNX4Q63HM2 1172 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 DTHD1Q6ZMT9 781 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 ABCB6Q9NP58 842 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 UBP1Q9NZI7 540 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 KANSL3Q9P2N6 904 aa7.51□□□□□ -1.21
COPA-203ENST00000481040 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms