RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 GGA3Q9NZ52 723 aa18.19■□□□□ 0.5
ATG4B-218ENST00000479554 CHMP3Q9Y3E7 222 aa18.19■□□□□ 0.5
ATG4B-218ENST00000479554 ADM5C9JUS6 153 aa18.18■□□□□ 0.5
ATG4B-218ENST00000479554 GMLQ99445 158 aa18.18■□□□□ 0.5
ATG4B-218ENST00000479554 COA1Q9GZY4 146 aa18.18■□□□□ 0.5
ATG4B-218ENST00000479554 ZNF804BA4D1E1 1349 aa18.18■□□□□ 0.5
ATG4B-218ENST00000479554 GRM8O00222 908 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 USP17L8P0C7I0 530 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 KCNJ4P48050 445 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 FOXO4P98177 505 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 IFIT5Q13325 482 aaKnown RBP18.17■□□□□ 0.5
ATG4B-218ENST00000479554 SLC4A10Q6U841 1118 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 DLK2Q6UY11 383 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 SULF1Q8IWU6 871 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 FBXW7Q969H0 707 aa18.17■□□□□ 0.5
ATG4B-218ENST00000479554 CCER2I3L3R5 266 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 AOC2O75106 756 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 ALDH1L1O75891 902 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 LBX1P52954 281 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 CHRNDQ07001 517 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 BEGAINQ9BUH8 593 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 MYOZ2Q9NPC6 264 aa18.16■□□□□ 0.5
ATG4B-218ENST00000479554 C9orf78Q9NZ63 289 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-218ENST00000479554 ASTN2O75129 1339 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-218ENST00000479554 ZNF646O15015 1829 aaPredicted RBP18.16■□□□□ 0.5
ATG4B-218ENST00000479554 A0A1B0GUL6 1792 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 CAPN15O75808 1086 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
ATG4B-218ENST00000479554 MAP2K2P36507 400 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 HUNKP57058 714 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 SCARF1Q14162 830 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 DACT2Q5SW24 774 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 LMBR1LQ6UX01 489 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 MYO3BQ8WXR4 1341 aa18.15■□□□□ 0.5
ATG4B-218ENST00000479554 E9PSI1 815 aa18.14■□□□□ 0.49
ATG4B-218ENST00000479554 KLRK1P26718 216 aa18.14■□□□□ 0.49
ATG4B-218ENST00000479554 TAF7LQ5H9L4 462 aa18.14■□□□□ 0.49
ATG4B-218ENST00000479554 STRIP1Q5VSL9 837 aa18.14■□□□□ 0.49
ATG4B-218ENST00000479554 ANGEL2Q5VTE6 544 aaKnown RBP18.14■□□□□ 0.49
ATG4B-218ENST00000479554 C2orf69Q8N8R5 385 aa18.14■□□□□ 0.49
ATG4B-218ENST00000479554 GBA2Q9HCG7 927 aaPredicted RBP18.14■□□□□ 0.49
ATG4B-218ENST00000479554 POLR2AP24928 1970 aaKnown RBP18.13■□□□□ 0.49
ATG4B-218ENST00000479554 CCDC57Q2TAC2 916 aa18.13■□□□□ 0.49
ATG4B-218ENST00000479554 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
ATG4B-218ENST00000479554 MXD3Q9BW11 206 aa18.13■□□□□ 0.49
ATG4B-218ENST00000479554 TAF5LO75529 589 aa18.12■□□□□ 0.49
ATG4B-218ENST00000479554 OGFOD1Q8N543 542 aa18.12■□□□□ 0.49
ATG4B-218ENST00000479554 HELBQ8NG08 1087 aaPredicted RBP18.12■□□□□ 0.49
ATG4B-218ENST00000479554 CDCA5Q96FF9 252 aa18.12■□□□□ 0.49
ATG4B-218ENST00000479554 PITPNM2Q9BZ72 1349 aa18.12■□□□□ 0.49
ATG4B-218ENST00000479554 NOGQ13253 232 aa18.11■□□□□ 0.49
ATG4B-218ENST00000479554 TTLL5Q6EMB2 1281 aa18.11■□□□□ 0.49
ATG4B-218ENST00000479554 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
ATG4B-218ENST00000479554 PTPRCP08575 1304 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 SNAP23O00161 211 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 BRPF1P55201 1214 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-218ENST00000479554 GTF2IP78347 998 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 RGMBQ6NW40 437 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 LDHAL6AQ6ZMR3 332 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 SUCLG2Q96I99 432 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 ZNF594Q96JF6 807 aaPredicted RBP18.1■□□□□ 0.49
ATG4B-218ENST00000479554 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 CNNM1Q9NRU3 951 aa18.1■□□□□ 0.49
ATG4B-218ENST00000479554 IRS2Q9Y4H2 1338 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 CA12O43570 354 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 MMP14P50281 582 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 SLFN5Q08AF3 891 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 NBPF9Q3BBW0 867 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 C15orf52Q6ZUT6 534 aaKnown RBP18.09■□□□□ 0.49
ATG4B-218ENST00000479554 HDAC9Q9UKV0 1011 aa18.09■□□□□ 0.49
ATG4B-218ENST00000479554 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
ATG4B-218ENST00000479554 ZNF804AQ7Z570 1209 aa18.08■□□□□ 0.48
ATG4B-218ENST00000479554 KIAA0825Q8IV33 1275 aa18.08■□□□□ 0.48
ATG4B-218ENST00000479554 SSH1Q8WYL5 1049 aa18.08■□□□□ 0.48
ATG4B-218ENST00000479554 PAPPA2Q9BXP8 1791 aa18.08■□□□□ 0.48
ATG4B-218ENST00000479554 UTYO14607 1347 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 WNT10BO00744 389 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 PLIN1O60240 522 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 SASH1O94885 1247 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 ZNF157P51786 506 aaPredicted RBP18.07■□□□□ 0.48
ATG4B-218ENST00000479554 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 TSKSQ9UJT2 592 aa18.07■□□□□ 0.48
ATG4B-218ENST00000479554 SCAF8Q9UPN6 1271 aaKnown RBP18.07■□□□□ 0.48
ATG4B-218ENST00000479554 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
ATG4B-218ENST00000479554 FAM155AB1AL88 458 aaPredicted RBP18.05■□□□□ 0.48
ATG4B-218ENST00000479554 IL1R1P14778 569 aa18.05■□□□□ 0.48
ATG4B-218ENST00000479554 FKBP1BP68106 108 aa18.05■□□□□ 0.48
ATG4B-218ENST00000479554 ALDH1L2Q3SY69 923 aa18.05■□□□□ 0.48
ATG4B-218ENST00000479554 CDCA7LQ96GN5 454 aa18.05■□□□□ 0.48
ATG4B-218ENST00000479554 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
ATG4B-218ENST00000479554 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
ATG4B-218ENST00000479554 SLC10A3P09131 477 aa18.04■□□□□ 0.48
ATG4B-218ENST00000479554 RABL6Q3YEC7 729 aaPredicted RBP18.04■□□□□ 0.48
ATG4B-218ENST00000479554 SMC4Q9NTJ3 1288 aa18.04■□□□□ 0.48
ATG4B-218ENST00000479554 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
ATG4B-218ENST00000479554 UBE4AQ14139 1066 aa18.03■□□□□ 0.48
ATG4B-218ENST00000479554 APOBEC3FQ8IUX4 373 aaKnown RBP18.03■□□□□ 0.48
ATG4B-218ENST00000479554 CERS5Q8N5B7 392 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms