RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 PCDHGB7Q9Y5F8 929 aa9.56□□□□□ -0.88
VPS50-212ENST00000476413 ITPKAP23677 461 aa9.55□□□□□ -0.88
VPS50-212ENST00000476413 SPRED3Q2MJR0 410 aa9.55□□□□□ -0.88
VPS50-212ENST00000476413 PBX4Q9BYU1 374 aa9.55□□□□□ -0.88
VPS50-212ENST00000476413 NXF1Q9UBU9 619 aaKnown RBP9.55□□□□□ -0.88
VPS50-212ENST00000476413 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
VPS50-212ENST00000476413 PPM1HQ9ULR3 514 aa9.55□□□□□ -0.88
VPS50-212ENST00000476413 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.55□□□□□ -0.88
VPS50-212ENST00000476413 XRCC5P13010 732 aaKnown RBP9.54□□□□□ -0.88
VPS50-212ENST00000476413 MX2P20592 715 aa9.54□□□□□ -0.88
VPS50-212ENST00000476413 NOC4LQ9BVI4 516 aaKnown RBP9.54□□□□□ -0.88
VPS50-212ENST00000476413 UBE2OQ9C0C9 1292 aaKnown RBP9.54□□□□□ -0.88
VPS50-212ENST00000476413 IGFLR1Q9H665 355 aa9.54□□□□□ -0.88
VPS50-212ENST00000476413 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
VPS50-212ENST00000476413 PPP4R2Q9NY27 417 aa9.54□□□□□ -0.88
VPS50-212ENST00000476413 GGT7Q9UJ14 662 aa9.54□□□□□ -0.88
VPS50-212ENST00000476413 TTF2Q9UNY4 1162 aaKnown RBP9.54□□□□□ -0.88
VPS50-212ENST00000476413 H3BM21 787 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 PDE2AO00408 941 aaPredicted RBP9.53□□□□□ -0.88
VPS50-212ENST00000476413 ARAFP10398 606 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 TNNI2P48788 182 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 DTHD1Q6ZMT9 781 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 USP48Q86UV5 1035 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 FCHSD1Q86WN1 690 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 SPACA7Q96KW9 195 aa9.53□□□□□ -0.88
VPS50-212ENST00000476413 TRIM56Q9BRZ2 755 aaKnown RBP9.53□□□□□ -0.88
VPS50-212ENST00000476413 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 FBXO24O75426 580 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 VSIG8P0DPA2 414 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 SREK1Q8WXA9 508 aaKnown RBP9.52□□□□□ -0.89
VPS50-212ENST00000476413 POP1Q99575 1024 aaKnown RBP9.52□□□□□ -0.89
VPS50-212ENST00000476413 CCSER2Q9H7U1 834 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 SLC6A14Q9UN76 642 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 AKAP2Q9Y2D5 859 aa9.52□□□□□ -0.89
VPS50-212ENST00000476413 A0A096LPE4 126 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 A0A1W2PPZ6 126 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 TBC1D8BQ0IIM8 1120 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 PCSK7Q16549 785 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 PERM1Q5SV97 790 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 NPAS3Q8IXF0 933 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 ZNF654Q8IZM8 581 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 ZNF576Q9H609 170 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 MBIPQ9NS73 344 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 USP35Q9P2H5 1018 aa9.51□□□□□ -0.89
VPS50-212ENST00000476413 GHRHP01286 108 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 EIF2AK2P19525 551 aaKnown RBP9.5□□□□□ -0.89
VPS50-212ENST00000476413 ADH7P40394 386 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 FAAP100Q0VG06 881 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 RNFT1Q5M7Z0 435 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 FAM35AQ86V20 835 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 LPIN3Q9BQK8 851 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 RSRP1Q9BUV0 290 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 MUC3BQ9H195 1237 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 KBTBD4Q9NVX7 518 aa9.5□□□□□ -0.89
VPS50-212ENST00000476413 CPB1P15086 417 aa9.49□□□□□ -0.89
VPS50-212ENST00000476413 ADH6P28332 368 aa9.49□□□□□ -0.89
VPS50-212ENST00000476413 CCDC85BQ15834 202 aaPredicted RBP9.49□□□□□ -0.89
VPS50-212ENST00000476413 SLC43A3Q8NBI5 491 aa9.49□□□□□ -0.89
VPS50-212ENST00000476413 SEC31BQ9NQW1 1179 aa9.49□□□□□ -0.89
VPS50-212ENST00000476413 ENC1O14682 589 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 CELA3AP09093 270 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 TPTE2Q6XPS3 522 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 SV2BQ7L1I2 683 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 ASAP3Q8TDY4 903 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 PLD4Q96BZ4 506 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 NECAB3Q96P71 396 aaPredicted RBP9.48□□□□□ -0.89
VPS50-212ENST00000476413 CAPN10Q9HC96 672 aa9.48□□□□□ -0.89
VPS50-212ENST00000476413 NEURL1BA8MQ27 555 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 F6X3S4 739 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 MAP2K3P46734 347 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 RPS26P11Q5JNZ5 115 aaPredicted RBP9.47□□□□□ -0.89
VPS50-212ENST00000476413 CEP135Q66GS9 1140 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 ZFYVE1Q9HBF4 777 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 GGA1Q9UJY5 639 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 SOX13Q9UN79 622 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 ERBB4Q15303 1308 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 IGF1RP08069 1367 aa9.47□□□□□ -0.89
VPS50-212ENST00000476413 LOC105371045A0A1W2PR82 267 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 SMNDC1O75940 238 aaKnown RBP eCLIP9.46□□□□□ -0.9
VPS50-212ENST00000476413 KRT76Q01546 638 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 VN1R5Q7Z5H4 357 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 RHOVQ96L33 236 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 DRC1Q96MC2 740 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.9
VPS50-212ENST00000476413 ADAM19Q9H013 955 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 SMG9Q9H0W8 520 aaKnown RBP9.46□□□□□ -0.9
VPS50-212ENST00000476413 FRRS1LQ9P0K9 344 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 TRIM33Q9UPN9 1127 aa9.46□□□□□ -0.9
VPS50-212ENST00000476413 ELOA3CA0A087WX78 387 aaPredicted RBP9.45□□□□□ -0.9
VPS50-212ENST00000476413 ELOA3DA6NLF2 546 aaPredicted RBP9.45□□□□□ -0.9
VPS50-212ENST00000476413 PAGE1O75459 146 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 GJA8P48165 433 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 ELOA3BQ3SY89 546 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 ELOA3Q8NG57 546 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 BSNDQ8WZ55 320 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 GMLQ99445 158 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 CEP44Q9C0F1 390 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 RBSNQ9H1K0 784 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 ADAMTS1Q9UHI8 967 aa9.45□□□□□ -0.9
VPS50-212ENST00000476413 STARD13Q9Y3M8 1113 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms