RNA–Protein interactions for RNA: ENST00000476106.5

SOD1-204, Transcript of superoxide dismutase 1, humanhuman

TSL 5

Gene SOD1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-204ENST00000476106 LRRC24Q50LG9 513 aa17.12■□□□□ 0.33
SOD1-204ENST00000476106 SUPT20HQ8NEM7 779 aa17.12■□□□□ 0.33
SOD1-204ENST00000476106 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
SOD1-204ENST00000476106 WTIPA6NIX2 430 aaPredicted RBP17.11■□□□□ 0.33
SOD1-204ENST00000476106 ZBTB7BO15156 539 aaPredicted RBP17.11■□□□□ 0.33
SOD1-204ENST00000476106 ECE1P42892 770 aa17.11■□□□□ 0.33
SOD1-204ENST00000476106 NIM1KQ8IY84 436 aa17.11■□□□□ 0.33
SOD1-204ENST00000476106 TBC1D16Q8TBP0 767 aa17.11■□□□□ 0.33
SOD1-204ENST00000476106 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
SOD1-204ENST00000476106 ABT1Q9ULW3 272 aaKnown RBP17.11■□□□□ 0.33
SOD1-204ENST00000476106 ZNF646O15015 1829 aaPredicted RBP17.1■□□□□ 0.33
SOD1-204ENST00000476106 PNMA6EA0A0J9YXQ4 647 aa17.1■□□□□ 0.33
SOD1-204ENST00000476106 SNAP23O00161 211 aa17.1■□□□□ 0.33
SOD1-204ENST00000476106 RFX5P48382 616 aaPredicted RBP17.1■□□□□ 0.33
SOD1-204ENST00000476106 METTL24Q5JXM2 366 aa17.1■□□□□ 0.33
SOD1-204ENST00000476106 JDP2Q8WYK2 163 aa17.1■□□□□ 0.33
SOD1-204ENST00000476106 RTFDC1Q9BY42 306 aaPredicted RBP17.1■□□□□ 0.33
SOD1-204ENST00000476106 CLEC11AQ9Y240 323 aa17.1■□□□□ 0.33
SOD1-204ENST00000476106 SUPT16HQ9Y5B9 1047 aaKnown RBP17.1■□□□□ 0.33
SOD1-204ENST00000476106 G3V3G9 751 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 KLRK1P26718 216 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 WASHC4Q2M389 1173 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 DBNDD1Q9H9R9 158 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
SOD1-204ENST00000476106 ATP2B4P23634 1241 aa17.08■□□□□ 0.32
SOD1-204ENST00000476106 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
SOD1-204ENST00000476106 L3MBTL3Q96JM7 780 aaPredicted RBP17.08■□□□□ 0.32
SOD1-204ENST00000476106 EYA3Q99504 573 aa17.08■□□□□ 0.32
SOD1-204ENST00000476106 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
SOD1-204ENST00000476106 ZNF804BA4D1E1 1349 aa17.07■□□□□ 0.32
SOD1-204ENST00000476106 EYA2O00167 538 aa17.07■□□□□ 0.32
SOD1-204ENST00000476106 CA12O43570 354 aa17.07■□□□□ 0.32
SOD1-204ENST00000476106 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
SOD1-204ENST00000476106 KIAA2012Q0VF49 1180 aa17.07■□□□□ 0.32
SOD1-204ENST00000476106 EAPPQ56P03 285 aaPredicted RBP17.07■□□□□ 0.32
SOD1-204ENST00000476106 MED23Q9ULK4 1368 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 MROH5Q6ZUA9 1318 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 ECE2O60344 883 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 OS9Q13438 667 aaPredicted RBP17.06■□□□□ 0.32
SOD1-204ENST00000476106 MTX1Q13505 466 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 DGKZQ13574 1117 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 CNTROBQ8N137 903 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 ZC3H12CQ9C0D7 883 aaKnown RBP17.06■□□□□ 0.32
SOD1-204ENST00000476106 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
SOD1-204ENST00000476106 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 SCN4AP35499 1836 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 EIF6P56537 245 aaKnown RBP17.05■□□□□ 0.32
SOD1-204ENST00000476106 PNMA8AQ86V59 439 aaPredicted RBP17.05■□□□□ 0.32
SOD1-204ENST00000476106 FBXW7Q969H0 707 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 CHMP4BQ9H444 224 aaKnown RBP17.05■□□□□ 0.32
SOD1-204ENST00000476106 ZBTB40Q9NUA8 1239 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 LEMD3Q9Y2U8 911 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 GJA3Q9Y6H8 435 aa17.05■□□□□ 0.32
SOD1-204ENST00000476106 RAD17O75943 681 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 MAP2K2P36507 400 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 PAXIP1Q6ZW49 1069 aaPredicted RBP17.04■□□□□ 0.32
SOD1-204ENST00000476106 ATG9AQ7Z3C6 839 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 TXNRD3Q86VQ6 643 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 BCL11AQ9H165 835 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 HACL1Q9UJ83 578 aa17.04■□□□□ 0.32
SOD1-204ENST00000476106 ATP8B2P98198 1209 aa17.03■□□□□ 0.32
SOD1-204ENST00000476106 COPRSQ9NQ92 184 aa17.03■□□□□ 0.32
SOD1-204ENST00000476106 TSKSQ9UJT2 592 aa17.03■□□□□ 0.32
SOD1-204ENST00000476106 TNRC18O15417 2968 aaPredicted RBP17.03■□□□□ 0.32
SOD1-204ENST00000476106 YDJCA8MPS7 323 aa17.02■□□□□ 0.32
SOD1-204ENST00000476106 POLA2Q14181 598 aa17.02■□□□□ 0.32
SOD1-204ENST00000476106 GCC1Q96CN9 775 aa17.02■□□□□ 0.32
SOD1-204ENST00000476106 ZNRF3Q9ULT6 936 aa17.02■□□□□ 0.32
SOD1-204ENST00000476106 FZD9O00144 591 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 APBB1O00213 710 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 SURF6O75683 361 aaKnown RBP17.01■□□□□ 0.31
SOD1-204ENST00000476106 CIAO1O76071 339 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 EPHX2P34913 555 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 IL15P40933 162 aaPredicted RBP17.01■□□□□ 0.31
SOD1-204ENST00000476106 G3BP1Q13283 466 aaKnown RBP eCLIP17.01■□□□□ 0.316e-7■■■□□ 18.3
SOD1-204ENST00000476106 MAP1SQ66K74 1059 aaPredicted RBP17.01■□□□□ 0.31
SOD1-204ENST00000476106 VGLL2Q8N8G2 317 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 SSH3Q8TE77 659 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 KCNQ5Q9NR82 932 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 CEP126Q9P2H0 1117 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 EXOC6BQ9Y2D4 811 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 ADAMTSL1Q8N6G6 1762 aa17.01■□□□□ 0.31
SOD1-204ENST00000476106 ZNF609O15014 1411 aa17■□□□□ 0.31
SOD1-204ENST00000476106 PDE8BO95263 885 aa17■□□□□ 0.31
SOD1-204ENST00000476106 GYG1P46976 350 aa17■□□□□ 0.31
SOD1-204ENST00000476106 CXCL9Q07325 125 aa17■□□□□ 0.31
SOD1-204ENST00000476106 TFCP2Q12800 502 aa17■□□□□ 0.31
SOD1-204ENST00000476106 GRM1Q13255 1194 aa17■□□□□ 0.31
SOD1-204ENST00000476106 PUM3Q15397 648 aaKnown RBP17■□□□□ 0.31
SOD1-204ENST00000476106 ATP2B3Q16720 1220 aa17■□□□□ 0.31
SOD1-204ENST00000476106 CIAPIN1Q6FI81 312 aa17■□□□□ 0.31
SOD1-204ENST00000476106 ZNF804AQ7Z570 1209 aa17■□□□□ 0.31
SOD1-204ENST00000476106 MYO5AQ9Y4I1 1855 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms