RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 GCC1Q96CN9 775 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 GPR101Q96P66 508 aaPredicted RBP16.44■□□□□ 0.22
BRAT1-205ENST00000473879 MPHOSPH8Q99549 860 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 DBNDD1Q9H9R9 158 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 ECE2O60344 883 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 EPS15P42566 896 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 RFX5P48382 616 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-205ENST00000473879 DOK7Q18PE1 504 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 EAPPQ56P03 285 aaPredicted RBP16.43■□□□□ 0.22
BRAT1-205ENST00000473879 SIRT2Q8IXJ6 389 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 ANKRD2Q9GZV1 360 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 GPRC5DQ9NZD1 345 aa16.43■□□□□ 0.22
BRAT1-205ENST00000473879 PSME4Q14997 1843 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 GMPSP49915 693 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-205ENST00000473879 CCDC57Q2TAC2 916 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 USP50Q70EL3 339 aaPredicted RBP16.42■□□□□ 0.22
BRAT1-205ENST00000473879 SMC5Q8IY18 1101 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 LEMD3Q9Y2U8 911 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 CHMP3Q9Y3E7 222 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 IRS2Q9Y4H2 1338 aa16.42■□□□□ 0.22
BRAT1-205ENST00000473879 G3V3G9 751 aa16.41■□□□□ 0.22
BRAT1-205ENST00000473879 SRGAP3O43295 1099 aa16.41■□□□□ 0.22
BRAT1-205ENST00000473879 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
BRAT1-205ENST00000473879 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
BRAT1-205ENST00000473879 ADARB2Q9NS39 739 aaKnown RBP16.41■□□□□ 0.22
BRAT1-205ENST00000473879 CLEC11AQ9Y240 323 aa16.41■□□□□ 0.22
BRAT1-205ENST00000473879 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
BRAT1-205ENST00000473879 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
BRAT1-205ENST00000473879 PSMD14O00487 310 aa16.4■□□□□ 0.22
BRAT1-205ENST00000473879 CHRNDQ07001 517 aa16.4■□□□□ 0.22
BRAT1-205ENST00000473879 DPF2Q92785 391 aa16.4■□□□□ 0.22
BRAT1-205ENST00000473879 PCNTO95613 3336 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 SCN9AQ15858 1988 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 WTIPA6NIX2 430 aaPredicted RBP16.39■□□□□ 0.21
BRAT1-205ENST00000473879 RPS12P25398 132 aaKnown RBP16.39■□□□□ 0.21
BRAT1-205ENST00000473879 POLA2Q14181 598 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 PODNQ7Z5L7 613 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 KCNQ5Q9NR82 932 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 ZNF804BA4D1E1 1349 aa16.39■□□□□ 0.21
BRAT1-205ENST00000473879 ITGBL1O95965 494 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-205ENST00000473879 VIL1P09327 827 aaKnown RBP16.38■□□□□ 0.21
BRAT1-205ENST00000473879 HSP90AB4PQ58FF6 505 aa16.38■□□□□ 0.21
BRAT1-205ENST00000473879 TAF7LQ5H9L4 462 aa16.38■□□□□ 0.21
BRAT1-205ENST00000473879 LDHAL6AQ6ZMR3 332 aa16.38■□□□□ 0.21
BRAT1-205ENST00000473879 DNAJC5GQ8N7S2 189 aa16.38■□□□□ 0.21
BRAT1-205ENST00000473879 ZBTB47Q9UFB7 747 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-205ENST00000473879 CNOT7Q9UIV1 285 aaKnown RBP16.38■□□□□ 0.21
BRAT1-205ENST00000473879 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
BRAT1-205ENST00000473879 PASKQ96RG2 1323 aa16.38■□□□□ 0.21
BRAT1-205ENST00000473879 ZNF609O15014 1411 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 H7C1D1 291 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 PTPN12Q05209 780 aaKnown RBP16.37■□□□□ 0.21
BRAT1-205ENST00000473879 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 VGLL2Q8N8G2 317 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 ZNF594Q96JF6 807 aaPredicted RBP16.37■□□□□ 0.21
BRAT1-205ENST00000473879 COA1Q9GZY4 146 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 RIPOR2Q9Y4F9 1068 aa16.37■□□□□ 0.21
BRAT1-205ENST00000473879 HTRA3P83110 453 aa16.36■□□□□ 0.21
BRAT1-205ENST00000473879 MAP1SQ66K74 1059 aaPredicted RBP16.36■□□□□ 0.21
BRAT1-205ENST00000473879 C15orf52Q6ZUT6 534 aaKnown RBP16.36■□□□□ 0.21
BRAT1-205ENST00000473879 CNNM1Q9NRU3 951 aa16.36■□□□□ 0.21
BRAT1-205ENST00000473879 ARAP2Q8WZ64 1704 aa16.36■□□□□ 0.21
BRAT1-205ENST00000473879 KCNJ4P48050 445 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 TXNRD3Q86VQ6 643 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 MICALL2Q8IY33 904 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 ZC3H15Q8WU90 426 aaKnown RBP16.35■□□□□ 0.21
BRAT1-205ENST00000473879 COPRSQ9NQ92 184 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 PGAP2Q9UHJ9 254 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 FBXO3Q9UK99 471 aa16.35■□□□□ 0.21
BRAT1-205ENST00000473879 USP17L3A6NCW0 530 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 USP17L4A6NCW7 530 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 RAB11FIP3O75154 756 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 TAF5LO75529 589 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 SURF6O75683 361 aaKnown RBP16.34■□□□□ 0.21
BRAT1-205ENST00000473879 NUCB1Q02818 461 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 RSBN1LQ6PCB5 846 aaPredicted RBP16.34■□□□□ 0.21
BRAT1-205ENST00000473879 USP17L1Q7RTZ2 530 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 ATG9AQ7Z3C6 839 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 AGBL3Q8NEM8 1001 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 HELBQ8NG08 1087 aaPredicted RBP16.34■□□□□ 0.21
BRAT1-205ENST00000473879 PUS3Q9BZE2 481 aaKnown RBP16.34■□□□□ 0.21
BRAT1-205ENST00000473879 CREBZFQ9NS37 354 aa16.34■□□□□ 0.21
BRAT1-205ENST00000473879 SHTN1A0MZ66 631 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 CIAO1O76071 339 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 KLRK1P26718 216 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 HIRAP54198 1017 aaPredicted RBP16.33■□□□□ 0.2
BRAT1-205ENST00000473879 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 CHD1LQ86WJ1 897 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 TRPM4Q8TD43 1214 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 EXOC6BQ9Y2D4 811 aa16.33■□□□□ 0.2
BRAT1-205ENST00000473879 NOP58Q9Y2X3 529 aaKnown RBP16.33■□□□□ 0.2
BRAT1-205ENST00000473879 SNAP23O00161 211 aa16.32■□□□□ 0.2
BRAT1-205ENST00000473879 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
BRAT1-205ENST00000473879 STRIP1Q5VSL9 837 aa16.32■□□□□ 0.2
BRAT1-205ENST00000473879 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
BRAT1-205ENST00000473879 KLRG1Q96E93 195 aa16.32■□□□□ 0.2
BRAT1-205ENST00000473879 GMLQ99445 158 aa16.32■□□□□ 0.2
BRAT1-205ENST00000473879 LRRCC1Q9C099 1032 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms