RNA–Protein interactions for RNA: ENST00000473311.5

ABCF3-210, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 2,844 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-210ENST00000473311 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 NSUN7Q8NE18 718 aaKnown RBP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 C16orf45Q96MC5 204 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
ABCF3-210ENST00000473311 FTOQ9C0B1 505 aaKnown RBP eCLIP16.38■□□□□ 0.21
ABCF3-210ENST00000473311 HMGB1P09429 215 aaKnown RBP16.37■□□□□ 0.21
ABCF3-210ENST00000473311 MMP14P50281 582 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 CCT2P78371 535 aaKnown RBP16.37■□□□□ 0.21
ABCF3-210ENST00000473311 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
ABCF3-210ENST00000473311 EFCC1Q9HA90 598 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 LAMA4Q16363 1823 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 PTPDC1A2A3K4 754 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 PPFIA3O75145 1194 aa16.37■□□□□ 0.21
ABCF3-210ENST00000473311 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
ABCF3-210ENST00000473311 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
ABCF3-210ENST00000473311 ARFGEF2Q9Y6D5 1785 aa16.36■□□□□ 0.21
ABCF3-210ENST00000473311 MEGF6O75095 1541 aa16.36■□□□□ 0.21
ABCF3-210ENST00000473311 CLGNO14967 610 aa16.36■□□□□ 0.21
ABCF3-210ENST00000473311 CAVIN2O95810 425 aa16.36■□□□□ 0.21
ABCF3-210ENST00000473311 PAG1Q9NWQ8 432 aa16.36■□□□□ 0.21
ABCF3-210ENST00000473311 GEMIN8Q9NWZ8 242 aaKnown RBP16.36■□□□□ 0.21
ABCF3-210ENST00000473311 NAA16Q6N069 864 aaPredicted RBP16.36■□□□□ 0.21
ABCF3-210ENST00000473311 CTDNEP1O95476 244 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 ADD1P35611 737 aaKnown RBP16.35■□□□□ 0.21
ABCF3-210ENST00000473311 TERF2Q15554 542 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 CCDC73Q6ZRK6 1079 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 C11orf57Q6ZUT1 292 aaPredicted RBP16.35■□□□□ 0.21
ABCF3-210ENST00000473311 NCOA5Q9HCD5 579 aaKnown RBP16.35■□□□□ 0.21
ABCF3-210ENST00000473311 RCOR1Q9UKL0 485 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 TIMM10P62072 90 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 GUCY1B3Q02153 619 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
ABCF3-210ENST00000473311 PLBD2Q8NHP8 589 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 CACTINQ8WUQ7 758 aaKnown RBP16.35■□□□□ 0.21
ABCF3-210ENST00000473311 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 USP28Q96RU2 1077 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 MYH15Q9Y2K3 1946 aa16.35■□□□□ 0.21
ABCF3-210ENST00000473311 CTAGE5O15320 804 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 CASP7P55210 303 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 STX1AQ16623 288 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 CCDC144BQ3MJ40 725 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 CCDC144CPQ8IYA2 1237 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 PALLDQ8WX93 1383 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 DSCC1Q9BVC3 393 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 HELLSQ9NRZ9 838 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 BECN2A8MW95 431 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 CYP27B1O15528 508 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 KINO60870 393 aaKnown RBP16.34■□□□□ 0.21
ABCF3-210ENST00000473311 TNNT1P13805 278 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 IQCB1Q15051 598 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 GOLPH3LQ9H4A5 285 aa16.34■□□□□ 0.21
ABCF3-210ENST00000473311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.21
ABCF3-210ENST00000473311 A0A0G2JLW4 131 aa16.33■□□□□ 0.21
ABCF3-210ENST00000473311 E7EWF7 191 aa16.33■□□□□ 0.21
ABCF3-210ENST00000473311 CABP4P57796 275 aa16.33■□□□□ 0.21
ABCF3-210ENST00000473311 CHST3Q7LGC8 479 aa16.33■□□□□ 0.21
ABCF3-210ENST00000473311 ZNF396Q96N95 335 aaPredicted RBP16.33■□□□□ 0.21
ABCF3-210ENST00000473311 DDX41Q9UJV9 622 aaKnown RBP16.33■□□□□ 0.21
ABCF3-210ENST00000473311 MORC2Q9Y6X9 1032 aaPredicted RBP16.33■□□□□ 0.21
ABCF3-210ENST00000473311 CERS3Q8IU89 383 aa16.33■□□□□ 0.2
ABCF3-210ENST00000473311 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-210ENST00000473311 BCCIPQ9P287 314 aaKnown RBP eCLIP16.33■□□□□ 0.2
ABCF3-210ENST00000473311 HSPD1P10809 573 aaKnown RBP16.32■□□□□ 0.2
ABCF3-210ENST00000473311 ME1P48163 572 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 FOXO4P98177 505 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
ABCF3-210ENST00000473311 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-210ENST00000473311 ATG9AQ7Z3C6 839 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 PROSER2Q86WR7 435 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-210ENST00000473311 A0A087WWV3 80 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 CDC25BP30305 580 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 ZMYM1Q5SVZ6 1142 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 IFIT1P09914 478 aaKnown RBP16.32■□□□□ 0.2
ABCF3-210ENST00000473311 FSIP1Q8NA03 581 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 AGXT2Q9BYV1 514 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 CTNNA3Q9UI47 895 aa16.32■□□□□ 0.2
ABCF3-210ENST00000473311 SNW1Q13573 536 aaKnown RBP16.31■□□□□ 0.2
ABCF3-210ENST00000473311 SARM1Q6SZW1 724 aa16.31■□□□□ 0.2
ABCF3-210ENST00000473311 SMTNL1A8MU46 457 aa16.31■□□□□ 0.2
ABCF3-210ENST00000473311 PDIA3P30101 505 aaKnown RBP16.31■□□□□ 0.2
ABCF3-210ENST00000473311 FAM160A1Q05DH4 1040 aa16.31■□□□□ 0.2
ABCF3-210ENST00000473311 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
ABCF3-210ENST00000473311 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 C1orf167Q5SNV9 1468 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 MAST3O60307 1309 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 H7C1W4 665 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 IL15P40933 162 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 KRT222Q8N1A0 295 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 FBXW7Q969H0 707 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 ZNF594Q96JF6 807 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 TRIM34Q9BYJ4 488 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
ABCF3-210ENST00000473311 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 LRRC24Q50LG9 513 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 CTR9Q6PD62 1173 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 TTLL7Q6ZT98 887 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 LRRC8AQ8IWT6 810 aa16.3■□□□□ 0.2
ABCF3-210ENST00000473311 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms