RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 ZNF280AP59817 542 aaPredicted RBP11.43□□□□□ -0.58
USF1-204ENST00000472217 CHRNDQ07001 517 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 USP17L1Q7RTZ2 530 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 USP48Q86UV5 1035 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 SSH1Q8WYL5 1049 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 GMLQ99445 158 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 ZNF408Q9H9D4 720 aa11.43□□□□□ -0.58
USF1-204ENST00000472217 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
USF1-204ENST00000472217 KRT26Q7Z3Y9 468 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 SAPCD2Q86UD0 394 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
USF1-204ENST00000472217 DCPSQ96C86 337 aaKnown RBP11.42□□□□□ -0.58
USF1-204ENST00000472217 SUCLG2Q96I99 432 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 CAPNS2Q96L46 248 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 COA1Q9GZY4 146 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 GGA3Q9NZ52 723 aa11.42□□□□□ -0.58
USF1-204ENST00000472217 UTYO14607 1347 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 ASTN2O75129 1339 aaPredicted RBP11.41□□□□□ -0.58
USF1-204ENST00000472217 PTPRCP08575 1304 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 IRS2Q9Y4H2 1338 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 SNAP23O00161 211 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 FOXN1O15353 648 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 TAF5LO75529 589 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 NBPF7P0C2Y1 421 aaPredicted RBP11.41□□□□□ -0.58
USF1-204ENST00000472217 USP17L8P0C7I0 530 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 KCNJ4P48050 445 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 GRM1Q13255 1194 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 CCDC57Q2TAC2 916 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 DACT2Q5SW24 774 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 CYP4F22Q6NT55 531 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 TRMT2AQ8IZ69 625 aaKnown RBP11.41□□□□□ -0.58
USF1-204ENST00000472217 FBXW7Q969H0 707 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
USF1-204ENST00000472217 MXD3Q9BW11 206 aa11.41□□□□□ -0.58
USF1-204ENST00000472217 ECE1P42892 770 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 STRIP1Q5VSL9 837 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 LDHAL6AQ6ZMR3 332 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 AIDAQ96BJ3 306 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 MYOZ2Q9NPC6 264 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 WBP1LQ9NX94 342 aa11.4□□□□□ -0.58
USF1-204ENST00000472217 MYO3BQ8WXR4 1341 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 SCARF1Q14162 830 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 ANGEL2Q5VTE6 544 aaKnown RBP11.39□□□□□ -0.59
USF1-204ENST00000472217 C15orf52Q6ZUT6 534 aaKnown RBP11.39□□□□□ -0.59
USF1-204ENST00000472217 SULF1Q8IWU6 871 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 CNKSR2Q8WXI2 1034 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 HHIPL1Q96JK4 782 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 BICC1Q9H694 974 aaKnown RBP11.39□□□□□ -0.59
USF1-204ENST00000472217 CNNM1Q9NRU3 951 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 SMC4Q9NTJ3 1288 aa11.39□□□□□ -0.59
USF1-204ENST00000472217 POLR2AP24928 1970 aaKnown RBP11.39□□□□□ -0.59
USF1-204ENST00000472217 PLIN1O60240 522 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 AOC2O75106 756 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 GTF2IP78347 998 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 MAP2K1Q02750 393 aaPredicted RBP11.38□□□□□ -0.59
USF1-204ENST00000472217 TTLL5Q6EMB2 1281 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 TNS4Q8IZW8 715 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 PUS3Q9BZE2 481 aaKnown RBP11.38□□□□□ -0.59
USF1-204ENST00000472217 CD209Q9NNX6 404 aa11.38□□□□□ -0.59
USF1-204ENST00000472217 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 CT47B1P0C2W7 299 aaPredicted RBP11.37□□□□□ -0.59
USF1-204ENST00000472217 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
USF1-204ENST00000472217 HUNKP57058 714 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 RABL6Q3YEC7 729 aaPredicted RBP11.37□□□□□ -0.59
USF1-204ENST00000472217 ZNF804AQ7Z570 1209 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 KIAA0825Q8IV33 1275 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 OGFOD1Q8N543 542 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 ANKRD44Q8N8A2 993 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 USP44Q9H0E7 712 aa11.37□□□□□ -0.59
USF1-204ENST00000472217 GBA2Q9HCG7 927 aaPredicted RBP11.37□□□□□ -0.59
USF1-204ENST00000472217 IL1R1P14778 569 aa11.36□□□□□ -0.59
USF1-204ENST00000472217 MAP2K2P36507 400 aa11.36□□□□□ -0.59
USF1-204ENST00000472217 C2orf69Q8N8R5 385 aa11.36□□□□□ -0.59
USF1-204ENST00000472217 SCAF8Q9UPN6 1271 aaKnown RBP11.36□□□□□ -0.59
USF1-204ENST00000472217 PCNTO95613 3336 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 WNT10BO00744 389 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 SASH1O94885 1247 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
USF1-204ENST00000472217 LBX1P52954 281 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 CERS5Q8N5B7 392 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 PRDM10Q9NQV6 1147 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 RIPOR2Q9Y4F9 1068 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 ARAP2Q8WZ64 1704 aa11.35□□□□□ -0.59
USF1-204ENST00000472217 PAPPA2Q9BXP8 1791 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 MMP14P50281 582 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 RGMBQ6NW40 437 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
USF1-204ENST00000472217 ZIC5Q96T25 663 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 BEGAINQ9BUH8 593 aa11.34□□□□□ -0.59
USF1-204ENST00000472217 HDAC9Q9UKV0 1011 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms