RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 COL4A5P29400 1685 aa13.04□□□□□ -0.32
SMC1A-206ENST00000470241 A0A1B0GUL6 1792 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 A0A1B0GUL7 405 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
SMC1A-206ENST00000470241 SLC5A1P13866 664 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 TIMM10P62072 90 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 DOK7Q18PE1 504 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 TNNI3KQ59H18 835 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 FPGT-TNNI3KV9GXZ4 949 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 UTRNP46939 3433 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 ZNF609O15014 1411 aa13.03□□□□□ -0.32
SMC1A-206ENST00000470241 ADORA1P30542 326 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 GYG1P46976 350 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 FBXO33Q7Z6M2 555 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 EAF2Q96CJ1 260 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-206ENST00000470241 GCC1Q96CN9 775 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 FAM84BQ96KN1 310 aaPredicted RBP13.02□□□□□ -0.33
SMC1A-206ENST00000470241 DBNDD1Q9H9R9 158 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 IL1RAPL2Q9NP60 686 aa13.02□□□□□ -0.33
SMC1A-206ENST00000470241 SMARCA5O60264 1052 aaPredicted RBP13.01□□□□□ -0.33
SMC1A-206ENST00000470241 ERICH6BQ5W0A0 696 aa13.01□□□□□ -0.33
SMC1A-206ENST00000470241 NIM1KQ8IY84 436 aa13.01□□□□□ -0.33
SMC1A-206ENST00000470241 XAGE2Q96GT9 111 aa13.01□□□□□ -0.33
SMC1A-206ENST00000470241 NEUROD6Q96NK8 337 aa13.01□□□□□ -0.33
SMC1A-206ENST00000470241 LRRCC1Q9C099 1032 aa13.01□□□□□ -0.33
SMC1A-206ENST00000470241 YDJCA8MPS7 323 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 FZD9O00144 591 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 ECE2O60344 883 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
SMC1A-206ENST00000470241 BCAMP50895 628 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 AACSQ86V21 672 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 JDP2Q8WYK2 163 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 COA1Q9GZY4 146 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 CCDC8Q9H0W5 538 aaPredicted RBP13□□□□□ -0.33
SMC1A-206ENST00000470241 CD209Q9NNX6 404 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 TLR7Q9NYK1 1049 aaKnown RBP13□□□□□ -0.33
SMC1A-206ENST00000470241 DBNLQ9UJU6 430 aaKnown RBP13□□□□□ -0.33
SMC1A-206ENST00000470241 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
SMC1A-206ENST00000470241 IL1R1P14778 569 aa12.99□□□□□ -0.33
SMC1A-206ENST00000470241 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
SMC1A-206ENST00000470241 ZNF804AQ7Z570 1209 aa12.99□□□□□ -0.33
SMC1A-206ENST00000470241 PODNQ7Z5L7 613 aa12.99□□□□□ -0.33
SMC1A-206ENST00000470241 CLASRPQ8N2M8 674 aaKnown RBP12.99□□□□□ -0.33
SMC1A-206ENST00000470241 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
SMC1A-206ENST00000470241 KDM2BQ8NHM5 1336 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 G3V3G9 751 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 PHKA1P46020 1223 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 CCDC102BQ68D86 513 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 B4GALNT3Q6L9W6 998 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 TDRD7Q8NHU6 1098 aaKnown RBP12.98□□□□□ -0.33
SMC1A-206ENST00000470241 BCL11AQ9H165 835 aa12.98□□□□□ -0.33
SMC1A-206ENST00000470241 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
SMC1A-206ENST00000470241 ZC3H4Q9UPT8 1303 aaKnown RBP12.97□□□□□ -0.33
SMC1A-206ENST00000470241 CXCL9Q07325 125 aa12.97□□□□□ -0.33
SMC1A-206ENST00000470241 VPS37DQ86XT2 251 aa12.97□□□□□ -0.33
SMC1A-206ENST00000470241 SBF1O95248 1867 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 ZBTB22O15209 634 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 RAD17O75943 681 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 IFIT2P09913 472 aaKnown RBP12.96□□□□□ -0.33
SMC1A-206ENST00000470241 EIF6P56537 245 aaKnown RBP12.96□□□□□ -0.33
SMC1A-206ENST00000470241 NUCB1Q02818 461 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 GORABQ5T7V8 394 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 C16orf71Q8IYS4 520 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-206ENST00000470241 CCDC136Q96JN2 1154 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 PPP4R2Q9NY27 417 aa12.96□□□□□ -0.33
SMC1A-206ENST00000470241 IQSEC3Q9UPP2 1182 aaPredicted RBP12.96□□□□□ -0.33
SMC1A-206ENST00000470241 GTF2IP78347 998 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 CCDC158Q5M9N0 1113 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 CIAPIN1Q6FI81 312 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 CHD1LQ86WJ1 897 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 OTUD7AQ8TE49 926 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-206ENST00000470241 ZNF512BQ96KM6 892 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-206ENST00000470241 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SMC1A-206ENST00000470241 JAG2Q9Y219 1238 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 ARAP2Q8WZ64 1704 aa12.95□□□□□ -0.34
SMC1A-206ENST00000470241 COL1A1P02452 1464 aaPredicted RBP12.95□□□□□ -0.34
SMC1A-206ENST00000470241 FAM205AQ6ZU69 1335 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 USP17L3A6NCW0 530 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 USP17L4A6NCW7 530 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 PSMD14O00487 310 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 VIL1P09327 827 aaKnown RBP12.94□□□□□ -0.34
SMC1A-206ENST00000470241 UQCRFS1P1P0C7P4 283 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 ARID4AP29374 1257 aaPredicted RBP12.94□□□□□ -0.34
SMC1A-206ENST00000470241 RASGRF1Q13972 1273 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 SCARF1Q14162 830 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 TTC39AQ5SRH9 613 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 DACT2Q5SW24 774 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 STRIP1Q5VSL9 837 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 TTLL5Q6EMB2 1281 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
SMC1A-206ENST00000470241 USP17L1Q7RTZ2 530 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 MXD3Q9BW11 206 aa12.94□□□□□ -0.34
SMC1A-206ENST00000470241 SALL3Q9BXA9 1300 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms