RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 GBA2Q9HCG7 927 aaPredicted RBP16.95■□□□□ 0.3
CPSF4-210ENST00000469897 GGA3Q9NZ52 723 aa16.95■□□□□ 0.3
CPSF4-210ENST00000469897 LRRC37AA6NMS7 1700 aa16.95■□□□□ 0.3
CPSF4-210ENST00000469897 F6X3S4 739 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 RGMBQ6NW40 437 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 FBXW7Q969H0 707 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 MPHOSPH8Q99549 860 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 LEMD3Q9Y2U8 911 aa16.94■□□□□ 0.3
CPSF4-210ENST00000469897 FAM161AQ3B820 660 aa16.93■□□□□ 0.3
CPSF4-210ENST00000469897 ANKRD2Q9GZV1 360 aa16.93■□□□□ 0.3
CPSF4-210ENST00000469897 COA1Q9GZY4 146 aa16.93■□□□□ 0.3
CPSF4-210ENST00000469897 SCAF8Q9UPN6 1271 aaKnown RBP16.93■□□□□ 0.3
CPSF4-210ENST00000469897 BRPF1P55201 1214 aaPredicted RBP16.92■□□□□ 0.3
CPSF4-210ENST00000469897 NOGQ13253 232 aa16.92■□□□□ 0.3
CPSF4-210ENST00000469897 DACT2Q5SW24 774 aa16.92■□□□□ 0.3
CPSF4-210ENST00000469897 BEND3Q5T5X7 828 aa16.92■□□□□ 0.3
CPSF4-210ENST00000469897 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
CPSF4-210ENST00000469897 ZNF804BA4D1E1 1349 aa16.92■□□□□ 0.3
CPSF4-210ENST00000469897 MED23Q9ULK4 1368 aa16.91■□□□□ 0.3
CPSF4-210ENST00000469897 ANKRD18BA2A2Z9 1011 aa16.91■□□□□ 0.3
CPSF4-210ENST00000469897 KLRK1P26718 216 aa16.91■□□□□ 0.3
CPSF4-210ENST00000469897 ZNF157P51786 506 aaPredicted RBP16.91■□□□□ 0.3
CPSF4-210ENST00000469897 FOXO4P98177 505 aa16.91■□□□□ 0.3
CPSF4-210ENST00000469897 NBPF9Q3BBW0 867 aa16.91■□□□□ 0.3
CPSF4-210ENST00000469897 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-210ENST00000469897 SNAP23O00161 211 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 CA12O43570 354 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 KIF23Q02241 960 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-210ENST00000469897 CHRNDQ07001 517 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 STRIP1Q5VSL9 837 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 PRAMEF18Q5VWM3 479 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 OGFOD1Q8N543 542 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 HELBQ8NG08 1087 aaPredicted RBP16.9■□□□□ 0.3
CPSF4-210ENST00000469897 CCDC102AQ96A19 550 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 ABHD8Q96I13 439 aa16.9■□□□□ 0.3
CPSF4-210ENST00000469897 TAF5LO75529 589 aa16.89■□□□□ 0.29
CPSF4-210ENST00000469897 KCNJ4P48050 445 aa16.89■□□□□ 0.29
CPSF4-210ENST00000469897 TTLL5Q6EMB2 1281 aa16.89■□□□□ 0.29
CPSF4-210ENST00000469897 CHMP3Q9Y3E7 222 aa16.89■□□□□ 0.29
CPSF4-210ENST00000469897 GTF2IP78347 998 aa16.88■□□□□ 0.29
CPSF4-210ENST00000469897 IFIT5Q13325 482 aaKnown RBP16.88■□□□□ 0.29
CPSF4-210ENST00000469897 EPHA10Q5JZY3 1008 aa16.88■□□□□ 0.29
CPSF4-210ENST00000469897 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
CPSF4-210ENST00000469897 SLC4A10Q6U841 1118 aa16.87■□□□□ 0.29
CPSF4-210ENST00000469897 MOB2Q70IA6 237 aa16.87■□□□□ 0.29
CPSF4-210ENST00000469897 ZNF594Q96JF6 807 aaPredicted RBP16.87■□□□□ 0.29
CPSF4-210ENST00000469897 WNT10BO00744 389 aa16.86■□□□□ 0.29
CPSF4-210ENST00000469897 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
CPSF4-210ENST00000469897 CD209Q9NNX6 404 aa16.86■□□□□ 0.29
CPSF4-210ENST00000469897 C9orf78Q9NZ63 289 aaPredicted RBP16.86■□□□□ 0.29
CPSF4-210ENST00000469897 MYO3BQ8WXR4 1341 aa16.86■□□□□ 0.29
CPSF4-210ENST00000469897 ZNF609O15014 1411 aa16.86■□□□□ 0.29
CPSF4-210ENST00000469897 UBE2Q2LH0YL09 131 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 GRM8O00222 908 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 PLIN1O60240 522 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 CCDC57Q2TAC2 916 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 PITPNM2Q9BZ72 1349 aa16.85■□□□□ 0.29
CPSF4-210ENST00000469897 CCDC85CA6NKD9 419 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 TRPA1O75762 1119 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 SASH1O94885 1247 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 SLC10A3P09131 477 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 FKBP1BP68106 108 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 LDHAL6AQ6ZMR3 332 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 SRCIN1Q9C0H9 1055 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 RNF186Q9NXI6 227 aa16.84■□□□□ 0.29
CPSF4-210ENST00000469897 TAF7LQ5H9L4 462 aa16.83■□□□□ 0.28
CPSF4-210ENST00000469897 CNNM1Q9NRU3 951 aa16.83■□□□□ 0.28
CPSF4-210ENST00000469897 HDAC9Q9UKV0 1011 aa16.83■□□□□ 0.28
CPSF4-210ENST00000469897 IRS2Q9Y4H2 1338 aa16.82■□□□□ 0.28
CPSF4-210ENST00000469897 ALDH1L1O75891 902 aa16.82■□□□□ 0.28
CPSF4-210ENST00000469897 MMP14P50281 582 aa16.82■□□□□ 0.28
CPSF4-210ENST00000469897 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
CPSF4-210ENST00000469897 C15orf52Q6ZUT6 534 aaKnown RBP16.82■□□□□ 0.28
CPSF4-210ENST00000469897 CERS5Q8N5B7 392 aa16.82■□□□□ 0.28
CPSF4-210ENST00000469897 MCOLN1Q9GZU1 580 aa16.82■□□□□ 0.28
CPSF4-210ENST00000469897 SCN9AQ15858 1988 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 F8W031 263 aaPredicted RBP16.81■□□□□ 0.28
CPSF4-210ENST00000469897 DGKZQ13574 1117 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 PRKG1Q13976 671 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 RASAL3Q86YV0 1011 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 MRPL50Q8N5N7 158 aaKnown RBP16.81■□□□□ 0.28
CPSF4-210ENST00000469897 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 JAG2Q9Y219 1238 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 TRPM7Q96QT4 1865 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 THSD7BQ9C0I4 1608 aa16.81■□□□□ 0.28
CPSF4-210ENST00000469897 ZNF521Q96K83 1311 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 NBPF7P0C2Y1 421 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-210ENST00000469897 IL1R1P14778 569 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 DLGAP5Q15398 846 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 ZNF804AQ7Z570 1209 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 ZBED3Q96IU2 234 aaPredicted RBP16.8■□□□□ 0.28
CPSF4-210ENST00000469897 PUS3Q9BZE2 481 aaKnown RBP16.8■□□□□ 0.28
CPSF4-210ENST00000469897 SAGE1Q9NXZ1 904 aa16.8■□□□□ 0.28
CPSF4-210ENST00000469897 NF2P35240 595 aa16.79■□□□□ 0.28
CPSF4-210ENST00000469897 PCDHAC2Q9Y5I4 1007 aa16.79■□□□□ 0.28
CPSF4-210ENST00000469897 REM2Q8IYK8 340 aaPredicted RBP16.78■□□□□ 0.28
CPSF4-210ENST00000469897 APOBEC3FQ8IUX4 373 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms