RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 EIF6P56537 245 aaKnown RBP15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 TFCP2Q12800 502 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 GCC1Q96CN9 775 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 GNL3LQ9NVN8 582 aaKnown RBP15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 LTBP1Q14766 1721 aa15.57■□□□□ 0.08
SPTLC1-204ENST00000469778 RIMBP2O15034 1052 aa15.56■□□□□ 0.08
SPTLC1-204ENST00000469778 MMP14P50281 582 aa15.56■□□□□ 0.08
SPTLC1-204ENST00000469778 PRELPP51888 382 aa15.56■□□□□ 0.08
SPTLC1-204ENST00000469778 FBXO33Q7Z6M2 555 aa15.56■□□□□ 0.08
SPTLC1-204ENST00000469778 VPS37DQ86XT2 251 aa15.56■□□□□ 0.08
SPTLC1-204ENST00000469778 DUOX1Q9NRD9 1551 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 IRS2Q9Y4H2 1338 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 IL1R1P14778 569 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 CLASRPQ8N2M8 674 aaKnown RBP15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 RHPN1Q8TCX5 695 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 FAM84BQ96KN1 310 aaPredicted RBP15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 CD209Q9NNX6 404 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 EXOC6BQ9Y2D4 811 aa15.55■□□□□ 0.08
SPTLC1-204ENST00000469778 KDM2BQ8NHM5 1336 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 GLTPD2A6NH11 291 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 SEMA3EO15041 775 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 ECE2O60344 883 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 TNNI3KQ59H18 835 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 SLC51AQ86UW1 340 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 GPC2Q8N158 579 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 LRRCC1Q9C099 1032 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 FPGT-TNNI3KV9GXZ4 949 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 SBF1O95248 1867 aa15.54■□□□□ 0.08
SPTLC1-204ENST00000469778 CHD4Q14839 1912 aa15.53■□□□□ 0.08
SPTLC1-204ENST00000469778 A0A1B0GUL7 405 aa15.53■□□□□ 0.08
SPTLC1-204ENST00000469778 STRIP1Q5VSL9 837 aa15.53■□□□□ 0.08
SPTLC1-204ENST00000469778 TDRD7Q8NHU6 1098 aaKnown RBP15.53■□□□□ 0.08
SPTLC1-204ENST00000469778 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
SPTLC1-204ENST00000469778 SPEF2Q9C093 1822 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 USP17L3A6NCW0 530 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 USP17L4A6NCW7 530 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 WTIPA6NIX2 430 aaPredicted RBP15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 IGSF3O75054 1194 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 RPS12P25398 132 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 TIMM10P62072 90 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 FKBP1AP62942 108 aaKnown RBP15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 CXCL9Q07325 125 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 DOK7Q18PE1 504 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 GORABQ5T7V8 394 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 CIAPIN1Q6FI81 312 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 USP17L1Q7RTZ2 530 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 TXNRD3Q86VQ6 643 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 XAGE2Q96GT9 111 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 ZNF512BQ96KM6 892 aaPredicted RBP15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 NEUROD6Q96NK8 337 aa15.52■□□□□ 0.08
SPTLC1-204ENST00000469778 DICER1Q9UPY3 1922 aaKnown RBP15.52■□□□□ 0.07
SPTLC1-204ENST00000469778 MYO3BQ8WXR4 1341 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 SNAP23O00161 211 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 VIL1P09327 827 aaKnown RBP15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 UQCRFS1P1P0C7P4 283 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 CCDC158Q5M9N0 1113 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 SMC5Q8IY18 1101 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 DPF2Q92785 391 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 DBNDD1Q9H9R9 158 aa15.51■□□□□ 0.07
SPTLC1-204ENST00000469778 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 FAM205AQ6ZU69 1335 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 FRAT2O75474 233 aaPredicted RBP15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 IFIT2P09913 472 aaKnown RBP15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 GYG1P46976 350 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 TTLL5Q6EMB2 1281 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 AGBL3Q8NEM8 1001 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 TBC1D22AQ8WUA7 517 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 L3MBTL3Q96JM7 780 aaPredicted RBP15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 GPR101Q96P66 508 aaPredicted RBP15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 DENND2AQ9ULE3 1009 aa15.5■□□□□ 0.07
SPTLC1-204ENST00000469778 IQCA1LA6NCM1 817 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 YDJCA8MPS7 323 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 YY1P25490 414 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 KLRK1P26718 216 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 BCAMP50895 628 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 CCDC102BQ68D86 513 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 EAF2Q96CJ1 260 aaPredicted RBP15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 SUGT1Q9Y2Z0 365 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 UTRNP46939 3433 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 ZNF609O15014 1411 aa15.49■□□□□ 0.07
SPTLC1-204ENST00000469778 AACSQ86V21 672 aa15.48■□□□□ 0.07
SPTLC1-204ENST00000469778 WDR66Q8TBY9 1149 aa15.48■□□□□ 0.07
SPTLC1-204ENST00000469778 CCDC88AQ3V6T2 1871 aa15.48■□□□□ 0.07
SPTLC1-204ENST00000469778 A0A1B0GUL6 1792 aa15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 RAD17O75943 681 aa15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 DACT2Q5SW24 774 aa15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 RSBN1LQ6PCB5 846 aaPredicted RBP15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 ZGPATQ8N5A5 531 aaKnown RBP15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 GPATCH3Q96I76 525 aa15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 IL1RAPL2Q9NP60 686 aa15.47■□□□□ 0.07
SPTLC1-204ENST00000469778 APBB1O00213 710 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 PSMD14O00487 310 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 IGHDP01880 384 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 VEGFAP15692 232 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 ARID4AP29374 1257 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 LMOD1P29536 600 aaPredicted RBP15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 ADORA1P30542 326 aa15.46■□□□□ 0.07
SPTLC1-204ENST00000469778 GTF2IP78347 998 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms