RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 SUPT20HQ8NEM7 779 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 SHROOM2Q13796 1616 aa17.34■□□□□ 0.37
LIMS2-213ENST00000469300 TNNI3KQ59H18 835 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 GGA1Q9UJY5 639 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 FPGT-TNNI3KV9GXZ4 949 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 UBE2HP62256 183 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 TCIRG1Q13488 830 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 FILIP1Q7Z7B0 1213 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 KCNG4Q8TDN1 519 aa17.33■□□□□ 0.37
LIMS2-213ENST00000469300 GIGYF1O75420 1035 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-213ENST00000469300 VPS36Q86VN1 386 aa17.33■□□□□ 0.36
LIMS2-213ENST00000469300 CHMLP26374 656 aa17.33■□□□□ 0.36
LIMS2-213ENST00000469300 CETN1Q12798 172 aa17.33■□□□□ 0.36
LIMS2-213ENST00000469300 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
LIMS2-213ENST00000469300 DHX32Q7L7V1 743 aaKnown RBP17.33■□□□□ 0.36
LIMS2-213ENST00000469300 LPIN2Q92539 896 aa17.33■□□□□ 0.36
LIMS2-213ENST00000469300 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-213ENST00000469300 CAMK4Q16566 473 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 HCLS1P14317 486 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-213ENST00000469300 PICALMQ13492 652 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 LARP6Q9BRS8 491 aaKnown RBP17.32■□□□□ 0.36
LIMS2-213ENST00000469300 USP6P35125 1406 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 CCDC181Q5TID7 509 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 IQCEQ6IPM2 695 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 Q6ZUG5 572 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 PAF1Q8N7H5 531 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 TRPC5Q9UL62 973 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-213ENST00000469300 MROH5Q6ZUA9 1318 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 KIF2AO00139 706 aaPredicted RBP17.32■□□□□ 0.36
LIMS2-213ENST00000469300 UFL1O94874 794 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 SH2D4AQ9H788 454 aa17.32■□□□□ 0.36
LIMS2-213ENST00000469300 SFPQP23246 707 aaKnown RBP eCLIP17.31■□□□□ 0.36
LIMS2-213ENST00000469300 LEKR1Q6ZMV7 388 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 TFIP11Q9UBB9 837 aaKnown RBP17.31■□□□□ 0.36
LIMS2-213ENST00000469300 PATL2C9JE40 543 aaKnown RBP17.31■□□□□ 0.36
LIMS2-213ENST00000469300 H0YIN7 160 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 C6orf50Q9HD87 102 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 CETN2P41208 172 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 IL17REQ8NFR9 667 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 PDE6BP35913 854 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 KLHL10Q6JEL2 608 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
LIMS2-213ENST00000469300 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
LIMS2-213ENST00000469300 TET3O43151 1660 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 APPBP2Q92624 585 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 VEZTQ9HBM0 779 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 RMND1Q9NWS8 449 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
LIMS2-213ENST00000469300 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 KIF1BO60333 1816 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 LMOD1P29536 600 aaPredicted RBP17.29■□□□□ 0.36
LIMS2-213ENST00000469300 ARHGAP29Q52LW3 1261 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 UBA5Q9GZZ9 404 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 TSPOAP1O95153 1857 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 ALDH1B1P30837 517 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 STX1AQ16623 288 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 SEPT11Q9NVA2 429 aaKnown RBP17.29■□□□□ 0.36
LIMS2-213ENST00000469300 RIMBP2O15034 1052 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 IDEP14735 1019 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 TIMM10P62072 90 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 KRI1Q8N9T8 703 aaKnown RBP17.29■□□□□ 0.36
LIMS2-213ENST00000469300 CCDC150Q8NCX0 1101 aa17.29■□□□□ 0.36
LIMS2-213ENST00000469300 CACNA2D4Q7Z3S7 1137 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 ZSCAN30Q86W11 494 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 TBC1D22AQ8WUA7 517 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 APBA3O96018 575 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 MIGA1Q8NAN2 632 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 HOOK2Q96ED9 719 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 RRP36Q96EU6 259 aaKnown RBP17.28■□□□□ 0.36
LIMS2-213ENST00000469300 XAGE2Q96GT9 111 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 GTPBP4Q9BZE4 634 aaKnown RBP17.28■□□□□ 0.36
LIMS2-213ENST00000469300 FBXO3Q9UK99 471 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 GNA11P29992 359 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 SPA17Q15506 151 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 KIAA1328Q86T90 577 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 TEX11Q8IYF3 940 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 CCDC112Q8NEF3 446 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 INTS4Q96HW7 963 aaKnown RBP17.28■□□□□ 0.36
LIMS2-213ENST00000469300 SUCLG2Q96I99 432 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 RBM28Q9NW13 759 aaKnown RBP17.28■□□□□ 0.36
LIMS2-213ENST00000469300 NAPAP54920 295 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 NECAB1Q8N987 351 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 TAF4BQ92750 862 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
LIMS2-213ENST00000469300 MBD4O95243 580 aa17.27■□□□□ 0.36
LIMS2-213ENST00000469300 ZSCAN12O43309 604 aa17.27■□□□□ 0.36
LIMS2-213ENST00000469300 SLC4A8Q2Y0W8 1093 aa17.27■□□□□ 0.36
LIMS2-213ENST00000469300 PDCL2Q8N4E4 241 aa17.27■□□□□ 0.36
LIMS2-213ENST00000469300 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
LIMS2-213ENST00000469300 TOP1P11387 765 aaKnown RBP17.27■□□□□ 0.35
LIMS2-213ENST00000469300 TMEM87BQ96K49 555 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 NEURL1BA8MQ27 555 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.35
LIMS2-213ENST00000469300 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.35
LIMS2-213ENST00000469300 LRRC2Q9BYS8 371 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms