RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 WDR17Q8IZU2 1322 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 RAD50Q92878 1312 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 SLC27A2O14975 620 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 KCNQ2O43526 872 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 GYS2P54840 703 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 ME3Q16798 604 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 PAG1Q9NWQ8 432 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 WWC3Q9ULE0 1092 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 RAD51AP2Q09MP3 1159 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 NFXL1Q6ZNB6 911 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 CARD10Q9BWT7 1032 aa14.44□□□□□ -0.1
USP11-206ENST00000469080 IRS4O14654 1257 aaPredicted RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 CPLX1O14810 134 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 KRT222Q8N1A0 295 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 BABAM1Q9NWV8 329 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 TMEM63CQ9P1W3 806 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 STAP2Q9UGK3 403 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 DHX16O60231 1041 aaKnown RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 MEX3CQ5U5Q3 659 aaKnown RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 ERCC4Q92889 916 aaPredicted RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 GREM2Q9H772 168 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 LMBRD1Q9NUN5 540 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 MON2Q7Z3U7 1717 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 ITGA6P23229 1130 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 RALYLQ86SE5 291 aaKnown RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 MIGA1Q8NAN2 632 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 GPT2Q8TD30 523 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 TPCN1Q9ULQ1 816 aa14.43□□□□□ -0.1
USP11-206ENST00000469080 CHD2O14647 1828 aaKnown RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 WDR33Q9C0J8 1336 aaKnown RBP14.43□□□□□ -0.1
USP11-206ENST00000469080 PSMA5P28066 241 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 ZAP70P43403 619 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 A0A087WWV3 80 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 GOLGA6L6A8MZA4 724 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 MCM2P49736 904 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 DRC1Q96MC2 740 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 NCAPGQ9BPX3 1015 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 NIP7Q9Y221 180 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP11-206ENST00000469080 KNDC1Q76NI1 1749 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 XRN1Q8IZH2 1706 aaKnown RBP14.42□□□□□ -0.1
USP11-206ENST00000469080 UBAP1LF5GYI3 381 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 SF3A1Q15459 793 aaKnown RBP14.42□□□□□ -0.1
USP11-206ENST00000469080 NEK1Q96PY6 1258 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 CEP83Q9Y592 693 aa14.42□□□□□ -0.1
USP11-206ENST00000469080 POLR3DP05423 398 aaPredicted RBP14.41□□□□□ -0.1
USP11-206ENST00000469080 ANKRD7Q92527 254 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 SEC31BQ9NQW1 1179 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 CTNNA3Q9UI47 895 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 ZNF142P52746 1687 aaPredicted RBP14.41□□□□□ -0.1
USP11-206ENST00000469080 TTC41PQ6P2S7 1318 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 XAGE2Q96GT9 111 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 ZKSCAN3Q9BRR0 538 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 INCENPQ9NQS7 918 aa14.41□□□□□ -0.1
USP11-206ENST00000469080 MINDY4BA8MYZ0 360 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 SLC9C2Q5TAH2 1124 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 ICE2Q659A1 982 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 EYA2O00167 538 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 SCARF1Q14162 830 aa14.4□□□□□ -0.1
USP11-206ENST00000469080 DDX41Q9UJV9 622 aaKnown RBP14.4□□□□□ -0.1
USP11-206ENST00000469080 CDC37L1Q7L3B6 337 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 MYL10Q9BUA6 226 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 GJB4Q9NTQ9 266 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 USP25Q9UHP3 1055 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
USP11-206ENST00000469080 ANKRD18BA2A2Z9 1011 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 NAA30Q147X3 362 aaPredicted RBP14.39□□□□□ -0.11
USP11-206ENST00000469080 MCMDC2Q4G0Z9 681 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 ST7Q9NRC1 585 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 LRP2BPQ9P2M1 347 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 NALCNQ8IZF0 1738 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 EGFL6Q8IUX8 553 aa14.39□□□□□ -0.11
USP11-206ENST00000469080 HIP1O00291 1037 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 TRDNQ13061 729 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 NUP133Q8WUM0 1156 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 FTOQ9C0B1 505 aaKnown RBP eCLIP14.38□□□□□ -0.11
USP11-206ENST00000469080 ATG3Q9NT62 314 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 RGPD2P0DJD1 1756 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 ZSCAN22P10073 491 aaPredicted RBP14.38□□□□□ -0.11
USP11-206ENST00000469080 GRIPAP1Q4V328 841 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 SYAP1Q96A49 352 aaPredicted RBP14.38□□□□□ -0.11
USP11-206ENST00000469080 AKAP12Q02952 1782 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 TCIRG1Q13488 830 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 SART3Q15020 963 aaKnown RBP14.38□□□□□ -0.11
USP11-206ENST00000469080 ZRSR1Q15695 479 aaKnown RBP14.38□□□□□ -0.11
USP11-206ENST00000469080 MICU3Q86XE3 530 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 RAI14Q9P0K7 980 aa14.38□□□□□ -0.11
USP11-206ENST00000469080 NOP2P46087 812 aaKnown RBP14.37□□□□□ -0.11
USP11-206ENST00000469080 NCBP1Q09161 790 aaKnown RBP14.37□□□□□ -0.11
USP11-206ENST00000469080 HEG1Q9ULI3 1381 aa14.37□□□□□ -0.11
USP11-206ENST00000469080 TRIM66O15016 1216 aa14.37□□□□□ -0.11
USP11-206ENST00000469080 CYP21A2P08686 494 aa14.37□□□□□ -0.11
USP11-206ENST00000469080 IL15P40933 162 aaPredicted RBP14.37□□□□□ -0.11
USP11-206ENST00000469080 SPATA32Q96LK8 384 aa14.37□□□□□ -0.11
USP11-206ENST00000469080 RAD21O60216 631 aa14.36□□□□□ -0.11
USP11-206ENST00000469080 CREBRFQ8IUR6 639 aa14.36□□□□□ -0.11
USP11-206ENST00000469080 NOL10Q9BSC4 688 aaKnown RBP14.36□□□□□ -0.11
USP11-206ENST00000469080 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms