RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 EPHX2P34913 555 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 SCNN1DP51172 638 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 FSTL1Q12841 308 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 PDE3AQ14432 1141 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 KLHDC4Q8TBB5 520 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 DPF2Q92785 391 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
TMEM39A-205ENST00000468676 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 PDE8BO95263 885 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 GMPSP49915 693 aaPredicted RBP18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 ZNF804AQ7Z570 1209 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 TXNRD3Q86VQ6 643 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 SMC1BQ8NDV3 1235 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 GPRC5DQ9NZD1 345 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 DDX19BQ9UMR2 479 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 SCN9AQ15858 1988 aa18.41■□□□□ 0.54
TMEM39A-205ENST00000468676 PSME4Q14997 1843 aa18.4■□□□□ 0.54
TMEM39A-205ENST00000468676 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
TMEM39A-205ENST00000468676 MVPQ14764 893 aaKnown RBP18.4■□□□□ 0.54
TMEM39A-205ENST00000468676 KCNQ5Q9NR82 932 aa18.4■□□□□ 0.54
TMEM39A-205ENST00000468676 IRS2Q9Y4H2 1338 aa18.4■□□□□ 0.54
TMEM39A-205ENST00000468676 SNAP23O00161 211 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 KLRK1P26718 216 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 EPS15P42566 896 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 STRIP1Q5VSL9 837 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 USP50Q70EL3 339 aaPredicted RBP18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 ATG9AQ7Z3C6 839 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 LDHDQ86WU2 507 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 VGLL2Q8N8G2 317 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 ADARB2Q9NS39 739 aaKnown RBP18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 CEP126Q9P2H0 1117 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 ZNF609O15014 1411 aa18.39■□□□□ 0.53
TMEM39A-205ENST00000468676 H7C1D1 291 aa18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 ATP8B2P98198 1209 aa18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 PUM3Q15397 648 aaKnown RBP18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 SIL1Q9H173 461 aa18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 CNOT7Q9UIV1 285 aaKnown RBP18.38■□□□□ 0.53
TMEM39A-205ENST00000468676 IL1R1P14778 569 aa18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 HIBADHP31937 336 aaKnown RBP18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 MMP14P50281 582 aa18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 CAVIN4Q5BKX8 364 aa18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 CHADLQ6NUI6 762 aa18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 PA2G4Q9UQ80 394 aaKnown RBP18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 ZBTB12Q9Y330 459 aaPredicted RBP18.37■□□□□ 0.53
TMEM39A-205ENST00000468676 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 IFIT1P09914 478 aaKnown RBP18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 TTLL5Q6EMB2 1281 aa18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 VPS37DQ86XT2 251 aa18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 MYO3BQ8WXR4 1341 aa18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 LPIN2Q92539 896 aa18.36■□□□□ 0.53
TMEM39A-205ENST00000468676 SLC5A1P13866 664 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 FGFR2P21802 821 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 POLA2Q14181 598 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 DACT2Q5SW24 774 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 MICALL2Q8IY33 904 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 SSH3Q8TE77 659 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
TMEM39A-205ENST00000468676 SASH1O94885 1247 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 FBXO33Q7Z6M2 555 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 FBXW7Q969H0 707 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 GMLQ99445 158 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 C1orf115Q9H7X2 142 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 AKAP2Q9Y2D5 859 aa18.34■□□□□ 0.53
TMEM39A-205ENST00000468676 USP17L8P0C7I0 530 aa18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 GYG1P46976 350 aa18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 FKBP1AP62942 108 aaKnown RBP18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 GTF2IP78347 998 aa18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 ATP2B3Q16720 1220 aa18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 TDRD7Q8NHU6 1098 aaKnown RBP18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 ZC3H15Q8WU90 426 aaKnown RBP18.33■□□□□ 0.52
TMEM39A-205ENST00000468676 POTEIP0CG38 1075 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 POTEJP0CG39 1038 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 HSPA6P17066 643 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 ZNF280AP59817 542 aaPredicted RBP18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 RPAP2Q8IXW5 612 aaPredicted RBP18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 OGFOD1Q8N543 542 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
TMEM39A-205ENST00000468676 FAM205AQ6ZU69 1335 aa18.31■□□□□ 0.52
TMEM39A-205ENST00000468676 FRAT2O75474 233 aaPredicted RBP18.3■□□□□ 0.52
TMEM39A-205ENST00000468676 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
TMEM39A-205ENST00000468676 PGAP2Q9UHJ9 254 aa18.3■□□□□ 0.52
TMEM39A-205ENST00000468676 HDAC9Q9UKV0 1011 aa18.3■□□□□ 0.52
TMEM39A-205ENST00000468676 NOP58Q9Y2X3 529 aaKnown RBP18.3■□□□□ 0.52
TMEM39A-205ENST00000468676 ZNF646O15015 1829 aaPredicted RBP18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 HMMRO75330 724 aa18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 SURF6O75683 361 aaKnown RBP18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 BCAMP50895 628 aa18.29■□□□□ 0.52
TMEM39A-205ENST00000468676 APLP1P51693 650 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.9 ms