RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 COPS6Q7L5N1 327 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 ZNF397Q8NF99 534 aaPredicted RBP15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 NCOA5Q9HCD5 579 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 KCND1Q9NSA2 647 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 C5P01031 1676 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 GUCY1B3Q02153 619 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 FBXW7Q969H0 707 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 AGXT2Q9BYV1 514 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 ME1P48163 572 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 ARHGEF25Q86VW2 580 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 CEP57L1Q8IYX8 460 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 ANKRD24Q8TF21 1146 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 HMGB1P09429 215 aaKnown RBP15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 FMR1NBQ8N0W7 255 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 ZNF396Q96N95 335 aaPredicted RBP15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 SH3TC1Q8TE82 1336 aa15.19■□□□□ 0.02
PDZRN3-205ENST00000466780 ELF2Q15723 593 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 RABL6Q3YEC7 729 aaPredicted RBP15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ATL3Q6DD88 541 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 FBXO38Q6PIJ6 1188 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 KBTBD3Q8NAB2 608 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ERO1AQ96HE7 468 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 PCDHA7Q9UN72 937 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ADAMTS7Q9UKP4 1686 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ZNF771Q7L3S4 317 aaPredicted RBP15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 OSBPL5Q9H0X9 879 aaPredicted RBP15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 FAM53CQ9NYF3 392 aa15.18■□□□□ 0.02
PDZRN3-205ENST00000466780 ABCC6O95255 1503 aa15.17■□□□□ 0.02
PDZRN3-205ENST00000466780 LRP10Q7Z4F1 713 aa15.17■□□□□ 0.02
PDZRN3-205ENST00000466780 CCDC9Q9Y3X0 531 aaKnown RBP15.17■□□□□ 0.02
PDZRN3-205ENST00000466780 UBE3BQ7Z3V4 1068 aa15.17■□□□□ 0.02
PDZRN3-205ENST00000466780 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
PDZRN3-205ENST00000466780 A0A1B0GVL5 298 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 FDPSP14324 419 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 PDIA3P30101 505 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 GSDMDP57764 484 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 E4F1Q66K89 784 aaPredicted RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 MRPS27Q92552 414 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 NEDD4P46934 1319 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 E7EWF7 191 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 SLU7O95391 586 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 DPCR1Q3MIW9 517 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 ANKRD13DQ6ZTN6 518 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 CHST3Q7LGC8 479 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 KRT222Q8N1A0 295 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 NDUFA8P51970 172 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 DSCC1Q9BVC3 393 aa15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 NAT10Q9H0A0 1025 aaKnown RBP15.16■□□□□ 0.02
PDZRN3-205ENST00000466780 CARMIL3Q8ND23 1372 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 PALLDQ8WX93 1383 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 CAMTA1Q9Y6Y1 1673 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 ADALQ6DHV7 355 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 ARMCX5Q6P1M9 558 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 RTEL1Q9NZ71 1219 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 GOLIM4O00461 696 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 ZC3H6P61129 1189 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 TERF2Q15554 542 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 SDF4Q9BRK5 362 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 XPO4Q9C0E2 1151 aaKnown RBP15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 ZNF446Q9NWS9 450 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 IMPACTQ9P2X3 320 aa15.15■□□□□ 0.02
PDZRN3-205ENST00000466780 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 OTUD7BQ6GQQ9 843 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 LRRN4CLQ8ND94 238 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 ZNF274Q96GC6 653 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 ZNF496Q96IT1 587 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 PPP1R13BQ96KQ4 1090 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 KIAA1468Q9P260 1216 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 KDM6AO15550 1401 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 A0A1W2PQ27 194 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 A0A1W2PQ64 194 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 A0A1W2PQD8 194 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 ATP5J2-PTCD1G3V325 749 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 KIF2AO00139 706 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 PTCD1O75127 700 aaKnown RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 HSPD1P10809 573 aaKnown RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 CASP7P55210 303 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 ZMYM1Q5SVZ6 1142 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 LINC00301Q8NCQ3 95 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 SYTL4Q96C24 671 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 L2HGDHQ9H9P8 463 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 SLC52A2Q9HAB3 445 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 GPHNQ9NQX3 736 aaPredicted RBP15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 PAG1Q9NWQ8 432 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 CLIC4Q9Y696 253 aa15.14■□□□□ 0.01
PDZRN3-205ENST00000466780 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 IFNKQ9P0W0 207 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 AFDNP55196 1824 aaKnown RBP15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 SLIT3O75094 1523 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 A0A087WZG4 1122 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 TMC6Q7Z403 805 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 PROSER2Q86WR7 435 aaPredicted RBP15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 NFATC2IPQ8NCF5 419 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 BPIFA3Q9BQP9 254 aa15.13■□□□□ 0.01
PDZRN3-205ENST00000466780 NPHP1O15259 732 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms