RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 CAPN2P17655 700 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 PDE6BP35913 854 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 RNF20Q5VTR2 975 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 ZBTB38Q8NAP3 1195 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 FHDC1Q9C0D6 1143 aaPredicted RBP13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 AK9Q5TCS8 1911 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 KIF13BQ9NQT8 1826 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 CLGNO14967 610 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 TRIM27P14373 513 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 GCKRQ14397 625 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 ERFEQ4G0M1 354 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 ZNF397Q8NF99 534 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 JARID2Q92833 1246 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 RIC1Q4ADV7 1423 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 ADCY5O95622 1261 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 PCCAP05165 728 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 TGFB2P61812 414 aa13.6□□□□□ -0.23
TRAPPC3-205ENST00000462715 ABCC4O15439 1325 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 KDM4AO75164 1064 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 CCDC24Q8N4L8 307 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 FAM89AQ96GI7 184 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 TNNQ9UQP3 1299 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 ABCC12Q96J65 1359 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 REC8O95072 547 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 TMEM87AQ8NBN3 555 aa13.59□□□□□ -0.23
TRAPPC3-205ENST00000462715 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.23
TRAPPC3-205ENST00000462715 SLC10A5Q5PT55 438 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 RNF214Q8ND24 703 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 C9orf78Q9NZ63 289 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 FEZ2Q9UHY8 353 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 BRD1O95696 1058 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 CCDC183Q5T5S1 534 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 NLRP3Q96P20 1036 aa13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 TTC12Q9H892 705 aaPredicted RBP13.58□□□□□ -0.24
TRAPPC3-205ENST00000462715 CDHR2Q9BYE9 1310 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 H0YIN7 160 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 GRM8O00222 908 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 IRS4O14654 1257 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 CYP2C19P33261 490 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 MUM1L1Q5H9M0 696 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 INTS3Q68E01 1043 aaKnown RBP13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 UBE3BQ7Z3V4 1068 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 ANKRD31Q8N7Z5 1873 aa13.57□□□□□ -0.24
TRAPPC3-205ENST00000462715 H7C1W4 665 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 IGSF3O75054 1194 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 C2CD5Q86YS7 1000 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 SECISBP2LQ93073 1101 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 HCLS1P14317 486 aaPredicted RBP13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 TRIM34Q9BYJ4 488 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 LAMB2P55268 1798 aa13.56□□□□□ -0.24
TRAPPC3-205ENST00000462715 KLRG2A4D1S0 409 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 SYNE4Q8N205 404 aa13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 KIF1BPQ96EK5 621 aa13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 USP26Q9BXU7 913 aa13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 NLGN2Q8NFZ4 835 aa13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 RNF216Q9NWF9 866 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 TNRC6CQ9HCJ0 1690 aaKnown RBP13.55□□□□□ -0.24
TRAPPC3-205ENST00000462715 A0A0G2JLW4 131 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 PDE8AO60658 829 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 DPEP1P16444 411 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 ITPRIPQ8IWB1 547 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 LNPKQ9C0E8 428 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 HDAC5Q9UQL6 1122 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 DDX60Q8IY21 1712 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 KIAA1551Q9HCM1 1747 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 UTYO14607 1347 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 SRGNP10124 158 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 NPR1P16066 1061 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 CHRNA5P30532 468 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 CRY2Q49AN0 593 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 TMEM57Q8N5G2 664 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 MASTLQ96GX5 879 aa13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
TRAPPC3-205ENST00000462715 CASP7P55210 303 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 CUL4AQ13619 759 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 STYK1Q6J9G0 422 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 BCCIPQ9P287 314 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 MX1P20591 662 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 CCDC112Q8NEF3 446 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 PLA2G12BQ9BX93 195 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 USP44Q9H0E7 712 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 PIM2Q9P1W9 311 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 DLEC1Q9Y238 1755 aa13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 COL11A2P13942 1736 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC3-205ENST00000462715 GNAI3P08754 354 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 CTSWP56202 376 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 PKP1Q13835 747 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 SF3B3Q15393 1217 aaKnown RBP13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 CCDC152Q4G0S7 254 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 TXLNBQ8N3L3 684 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 CNKSR1Q969H4 720 aa13.52□□□□□ -0.24
TRAPPC3-205ENST00000462715 RBM17Q96I25 401 aaKnown RBP13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms