RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 KAZALD1Q96I82 304 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 GLIS2Q9BZE0 524 aaPredicted RBP12.83□□□□□ -0.36
SF3A3-204ENST00000462258 COA1Q9GZY4 146 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 PGAP2Q9UHJ9 254 aa12.83□□□□□ -0.36
SF3A3-204ENST00000462258 ABT1Q9ULW3 272 aaKnown RBP12.83□□□□□ -0.36
SF3A3-204ENST00000462258 RASSF10A6NK89 507 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 TXNRD3Q86VQ6 643 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 AGBL3Q8NEM8 1001 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 ZNF594Q96JF6 807 aaPredicted RBP12.82□□□□□ -0.36
SF3A3-204ENST00000462258 BICC1Q9H694 974 aaKnown RBP12.82□□□□□ -0.36
SF3A3-204ENST00000462258 CNNM1Q9NRU3 951 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 ECM29Q5VYK3 1845 aa12.82□□□□□ -0.36
SF3A3-204ENST00000462258 TAF5LO75529 589 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 HSPA1AP0DMV8 641 aaKnown RBP12.81□□□□□ -0.36
SF3A3-204ENST00000462258 HSPA1BP0DMV9 641 aaKnown RBP12.81□□□□□ -0.36
SF3A3-204ENST00000462258 RABL6Q3YEC7 729 aaPredicted RBP12.81□□□□□ -0.36
SF3A3-204ENST00000462258 DACT2Q5SW24 774 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 RBM26Q5T8P6 1007 aaKnown RBP12.81□□□□□ -0.36
SF3A3-204ENST00000462258 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 HELBQ8NG08 1087 aaPredicted RBP12.81□□□□□ -0.36
SF3A3-204ENST00000462258 MYO3BQ8WXR4 1341 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 IRS2Q9Y4H2 1338 aa12.81□□□□□ -0.36
SF3A3-204ENST00000462258 MYH13Q9UKX3 1938 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 SNAP23O00161 211 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 CELF2O95319 508 aaKnown RBP12.8□□□□□ -0.36
SF3A3-204ENST00000462258 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 ZNF280AP59817 542 aaPredicted RBP12.8□□□□□ -0.36
SF3A3-204ENST00000462258 CDC37L1Q7L3B6 337 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 ANKRD44Q8N8A2 993 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 GMLQ99445 158 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 ZNF408Q9H9D4 720 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 GGA3Q9NZ52 723 aa12.8□□□□□ -0.36
SF3A3-204ENST00000462258 ADM5C9JUS6 153 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 VEGFBP49765 207 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 HNRNPUQ00839 825 aaKnown RBP eCLIP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 STRIP1Q5VSL9 837 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 CST9Q5W186 159 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 C15orf52Q6ZUT6 534 aaKnown RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 KRT26Q7Z3Y9 468 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 ZNF804AQ7Z570 1209 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 MXD3Q9BW11 206 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 API5Q9BZZ5 524 aaKnown RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 USP44Q9H0E7 712 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 NOB1Q9ULX3 412 aaKnown RBP12.79□□□□□ -0.36
SF3A3-204ENST00000462258 TLL2Q9Y6L7 1015 aa12.79□□□□□ -0.36
SF3A3-204ENST00000462258 PLIN1O60240 522 aa12.78□□□□□ -0.36
SF3A3-204ENST00000462258 USP48Q86UV5 1035 aa12.78□□□□□ -0.36
SF3A3-204ENST00000462258 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
SF3A3-204ENST00000462258 PUS3Q9BZE2 481 aaKnown RBP12.78□□□□□ -0.36
SF3A3-204ENST00000462258 CD209Q9NNX6 404 aa12.78□□□□□ -0.36
SF3A3-204ENST00000462258 ASTN2O75129 1339 aaPredicted RBP12.78□□□□□ -0.36
SF3A3-204ENST00000462258 PAPPA2Q9BXP8 1791 aa12.78□□□□□ -0.36
SF3A3-204ENST00000462258 GTF2IP78347 998 aa12.77□□□□□ -0.37
SF3A3-204ENST00000462258 TTLL5Q6EMB2 1281 aa12.77□□□□□ -0.37
SF3A3-204ENST00000462258 SULF1Q8IWU6 871 aa12.77□□□□□ -0.37
SF3A3-204ENST00000462258 MROH5Q6ZUA9 1318 aa12.77□□□□□ -0.37
SF3A3-204ENST00000462258 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.37
SF3A3-204ENST00000462258 UBTFL1P0CB47 393 aaPredicted RBP12.76□□□□□ -0.37
SF3A3-204ENST00000462258 ECE1P42892 770 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 SCARF1Q14162 830 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 ANGEL2Q5VTE6 544 aaKnown RBP12.76□□□□□ -0.37
SF3A3-204ENST00000462258 CYP4F22Q6NT55 531 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 DLK2Q6UY11 383 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 SAPCD2Q86UD0 394 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 OGFOD1Q8N543 542 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
SF3A3-204ENST00000462258 SASH1O94885 1247 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 IL1R1P14778 569 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 GRM1Q13255 1194 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 UBE4AQ14139 1066 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 LRRC24Q50LG9 513 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 METTL24Q5JXM2 366 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 KIAA0825Q8IV33 1275 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 KLHDC4Q8TBB5 520 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 CAPNS2Q96L46 248 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 HDAC9Q9UKV0 1011 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 RIPOR2Q9Y4F9 1068 aa12.75□□□□□ -0.37
SF3A3-204ENST00000462258 ARHGAP45Q92619 1136 aa12.74□□□□□ -0.37
SF3A3-204ENST00000462258 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
SF3A3-204ENST00000462258 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
SF3A3-204ENST00000462258 HHIPL1Q96JK4 782 aa12.74□□□□□ -0.37
SF3A3-204ENST00000462258 JAG2Q9Y219 1238 aa12.74□□□□□ -0.37
SF3A3-204ENST00000462258 ZBED9Q6R2W3 1325 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 WNT10BO00744 389 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 GYG1P46976 350 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 MMP14P50281 582 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 HUNKP57058 714 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 NBPF9Q3BBW0 867 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 CERS5Q8N5B7 392 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 VGLL2Q8N8G2 317 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 MEIS3Q99687 375 aa12.73□□□□□ -0.37
SF3A3-204ENST00000462258 GBA2Q9HCG7 927 aaPredicted RBP12.73□□□□□ -0.37
SF3A3-204ENST00000462258 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms