RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 METTL22Q9BUU2 404 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 NPHP1O15259 732 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 KIF20AO95235 890 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 GCP02774 474 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 ELF2Q15723 593 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 CCAR2Q8N163 923 aaKnown RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 THEMISQ8N1K5 641 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 KCNH5Q8NCM2 988 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 HAUS7Q99871 368 aa13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 GPHNQ9NQX3 736 aaPredicted RBP13.74□□□□□ -0.21
PDZRN3-203ENST00000462146 GOLIM4O00461 696 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 CAVIN2O95810 425 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 FAM160A1Q05DH4 1040 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 NAA16Q6N069 864 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 ZNF771Q7L3S4 317 aaPredicted RBP13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 DHX32Q7L7V1 743 aaKnown RBP13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 ARHGEF25Q86VW2 580 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 ARFGEF2Q9Y6D5 1785 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 FBXO38Q6PIJ6 1188 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 LRRN4CLQ8ND94 238 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 PCDHA7Q9UN72 937 aa13.73□□□□□ -0.21
PDZRN3-203ENST00000462146 ABCC6O95255 1503 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 SALL1Q9NSC2 1324 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 SCN11AQ9UI33 1791 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 ADAMTS7Q9UKP4 1686 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 CTAGE5O15320 804 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 LLPHQ9BRT6 129 aaKnown RBP13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 ANO10Q9NW15 660 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 DPCR1Q3MIW9 517 aa13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 ZNF496Q96IT1 587 aaPredicted RBP13.72□□□□□ -0.21
PDZRN3-203ENST00000462146 CARMIL3Q8ND23 1372 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 E7EWF7 191 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 FDPSP14324 419 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 NDUFA8P51970 172 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 EXOSC10Q01780 885 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 RAB11FIP4Q86YS3 637 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 KBTBD3Q8NAB2 608 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 NEUROD6Q96NK8 337 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 ST7Q9NRC1 585 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 GJB4Q9NTQ9 266 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 MORC2Q9Y6X9 1032 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 KDM6AO15550 1401 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 PDIA3P30101 505 aaKnown RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 LRP10Q7Z4F1 713 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 CEP57L1Q8IYX8 460 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 FMR1NBQ8N0W7 255 aaPredicted RBP13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 ORAI2Q96SN7 254 aa13.71□□□□□ -0.21
PDZRN3-203ENST00000462146 SH3TC1Q8TE82 1336 aa13.71□□□□□ -0.22
PDZRN3-203ENST00000462146 CAMTA1Q9Y6Y1 1673 aa13.71□□□□□ -0.22
PDZRN3-203ENST00000462146 BIN1O00499 593 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 NEMFO60524 1076 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 TIMM10P62072 90 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 ZNF397Q8NF99 534 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 CLIC4Q9Y696 253 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 NEDD4P46934 1319 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 A0A087WZG4 1122 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 SLFN14P0C7P3 912 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 E4F1Q66K89 784 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 ZNF396Q96N95 335 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 NWD2Q9ULI1 1742 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 RFX7Q2KHR2 1363 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 POLR3DP05423 398 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 HSPD1P10809 573 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 RABL6Q3YEC7 729 aaPredicted RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 ARMCX5Q6P1M9 558 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 MRPS27Q92552 414 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 XPO4Q9C0E2 1151 aaKnown RBP13.7□□□□□ -0.22
PDZRN3-203ENST00000462146 SMC2O95347 1197 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 ISM2Q6H9L7 571 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 LMBR1LQ6UX01 489 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 TMC6Q7Z403 805 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 AGXT2Q9BYV1 514 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 PAG1Q9NWQ8 432 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 IFNKQ9P0W0 207 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 SLC52A2Q9HAB3 445 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 MAST3O60307 1309 aa13.69□□□□□ -0.22
PDZRN3-203ENST00000462146 M0R2C6 588 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 ERO1AQ96HE7 468 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 ZNF446Q9NWS9 450 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 PALLDQ8WX93 1383 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 SLU7O95391 586 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 HMGB1P09429 215 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 SYT10Q6XYQ8 523 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 PPP1R13BQ96KQ4 1090 aa13.68□□□□□ -0.22
PDZRN3-203ENST00000462146 HAND2P61296 217 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 PTPN21Q16825 1174 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 SLIT3O75094 1523 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 LMTK3Q96Q04 1460 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 CASP7P55210 303 aa13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 ZC3H6P61129 1189 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-203ENST00000462146 GABPB1Q06547 395 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms