RNA–Protein interactions for RNA: ENST00000461708.1

SSB-206, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-206ENST00000461708 GBA2Q9HCG7 927 aaPredicted RBP22.81■■□□□ 1.24
SSB-206ENST00000461708 MMP14P50281 582 aa22.8■■□□□ 1.24
SSB-206ENST00000461708 ANKRD2Q9GZV1 360 aa22.8■■□□□ 1.24
SSB-206ENST00000461708 GGA3Q9NZ52 723 aa22.8■■□□□ 1.24
SSB-206ENST00000461708 PITPNM2Q9BZ72 1349 aa22.8■■□□□ 1.24
SSB-206ENST00000461708 ADM5C9JUS6 153 aa22.79■■□□□ 1.24
SSB-206ENST00000461708 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
SSB-206ENST00000461708 RGMBQ6NW40 437 aa22.79■■□□□ 1.24
SSB-206ENST00000461708 DLK2Q6UY11 383 aa22.79■■□□□ 1.24
SSB-206ENST00000461708 COA1Q9GZY4 146 aa22.79■■□□□ 1.24
SSB-206ENST00000461708 MYOZ2Q9NPC6 264 aa22.79■■□□□ 1.24
SSB-206ENST00000461708 WTIPA6NIX2 430 aaPredicted RBP22.78■■□□□ 1.24
SSB-206ENST00000461708 ITGA6P23229 1130 aa22.78■■□□□ 1.24
SSB-206ENST00000461708 SCARF1Q14162 830 aa22.78■■□□□ 1.24
SSB-206ENST00000461708 CCDC102AQ96A19 550 aa22.78■■□□□ 1.24
SSB-206ENST00000461708 MYO3BQ8WXR4 1341 aa22.78■■□□□ 1.24
SSB-206ENST00000461708 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
SSB-206ENST00000461708 DACT2Q5SW24 774 aa22.77■■□□□ 1.24
SSB-206ENST00000461708 STRIP1Q5VSL9 837 aa22.77■■□□□ 1.24
SSB-206ENST00000461708 ZNF646O15015 1829 aaPredicted RBP22.76■■□□□ 1.23
SSB-206ENST00000461708 CDCA5Q96FF9 252 aa22.76■■□□□ 1.23
SSB-206ENST00000461708 MPHOSPH8Q99549 860 aa22.76■■□□□ 1.23
SSB-206ENST00000461708 ZNF804BA4D1E1 1349 aa22.76■■□□□ 1.23
SSB-206ENST00000461708 ASTN2O75129 1339 aaPredicted RBP22.76■■□□□ 1.23
SSB-206ENST00000461708 FAM155AB1AL88 458 aaPredicted RBP22.75■■□□□ 1.23
SSB-206ENST00000461708 FKBP1BP68106 108 aa22.75■■□□□ 1.23
SSB-206ENST00000461708 ANGEL2Q5VTE6 544 aaKnown RBP22.75■■□□□ 1.23
SSB-206ENST00000461708 SALL2Q9Y467 1007 aaPredicted RBP22.75■■□□□ 1.23
SSB-206ENST00000461708 BEND3Q5T5X7 828 aa22.74■■□□□ 1.23
SSB-206ENST00000461708 OGFOD1Q8N543 542 aa22.74■■□□□ 1.23
SSB-206ENST00000461708 ABHD8Q96I13 439 aa22.74■■□□□ 1.23
SSB-206ENST00000461708 SPINK5Q9NQ38 1064 aaPredicted RBP22.74■■□□□ 1.23
SSB-206ENST00000461708 ANKRD18BA2A2Z9 1011 aa22.73■■□□□ 1.23
SSB-206ENST00000461708 TXNRD3Q86VQ6 643 aa22.73■■□□□ 1.23
SSB-206ENST00000461708 ZNF157P51786 506 aaPredicted RBP22.72■■□□□ 1.23
SSB-206ENST00000461708 FOXO4P98177 505 aa22.72■■□□□ 1.23
SSB-206ENST00000461708 C15orf52Q6ZUT6 534 aaKnown RBP22.72■■□□□ 1.23
SSB-206ENST00000461708 ZIC5Q96T25 663 aa22.72■■□□□ 1.23
SSB-206ENST00000461708 CHRNDQ07001 517 aa22.71■■□□□ 1.23
SSB-206ENST00000461708 IFIT5Q13325 482 aaKnown RBP22.71■■□□□ 1.23
SSB-206ENST00000461708 REM2Q8IYK8 340 aaPredicted RBP22.71■■□□□ 1.23
SSB-206ENST00000461708 SAGE1Q9NXZ1 904 aa22.71■■□□□ 1.23
SSB-206ENST00000461708 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
SSB-206ENST00000461708 F6X3S4 739 aa22.7■■□□□ 1.22
SSB-206ENST00000461708 SLC10A3P09131 477 aa22.7■■□□□ 1.22
SSB-206ENST00000461708 TTLL5Q6EMB2 1281 aa22.7■■□□□ 1.22
SSB-206ENST00000461708 TSKSQ9UJT2 592 aa22.7■■□□□ 1.22
SSB-206ENST00000461708 CASP8AP2Q9UKL3 1982 aa22.7■■□□□ 1.22
SSB-206ENST00000461708 KCNJ4P48050 445 aa22.69■■□□□ 1.22
SSB-206ENST00000461708 NBPF9Q3BBW0 867 aa22.69■■□□□ 1.22
SSB-206ENST00000461708 IRS2Q9Y4H2 1338 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 GRM8O00222 908 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 WNT10BO00744 389 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 ALDH1L1O75891 902 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 KLRK1P26718 216 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 KIF23Q02241 960 aaPredicted RBP22.68■■□□□ 1.22
SSB-206ENST00000461708 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 MXD3Q9BW11 206 aa22.68■■□□□ 1.22
SSB-206ENST00000461708 AKAP11Q9UKA4 1901 aa22.67■■□□□ 1.22
SSB-206ENST00000461708 ZNF521Q96K83 1311 aa22.67■■□□□ 1.22
SSB-206ENST00000461708 CD209Q9NNX6 404 aa22.67■■□□□ 1.22
SSB-206ENST00000461708 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
SSB-206ENST00000461708 FBXW7Q969H0 707 aa22.66■■□□□ 1.22
SSB-206ENST00000461708 HDAC9Q9UKV0 1011 aa22.66■■□□□ 1.22
SSB-206ENST00000461708 GTF2IP78347 998 aa22.65■■□□□ 1.22
SSB-206ENST00000461708 CCDC57Q2TAC2 916 aa22.65■■□□□ 1.22
SSB-206ENST00000461708 LMBR1LQ6UX01 489 aa22.65■■□□□ 1.22
SSB-206ENST00000461708 ZBED3Q96IU2 234 aaPredicted RBP22.65■■□□□ 1.22
SSB-206ENST00000461708 SRCIN1Q9C0H9 1055 aa22.64■■□□□ 1.21
SSB-206ENST00000461708 C9orf78Q9NZ63 289 aaPredicted RBP22.64■■□□□ 1.21
SSB-206ENST00000461708 IL1R1P14778 569 aa22.63■■□□□ 1.21
SSB-206ENST00000461708 EPHA10Q5JZY3 1008 aa22.63■■□□□ 1.21
SSB-206ENST00000461708 RASAL3Q86YV0 1011 aa22.63■■□□□ 1.21
SSB-206ENST00000461708 APOBEC3FQ8IUX4 373 aaKnown RBP22.63■■□□□ 1.21
SSB-206ENST00000461708 CSRNP1Q96S65 589 aa22.63■■□□□ 1.21
SSB-206ENST00000461708 CHMP3Q9Y3E7 222 aa22.63■■□□□ 1.21
SSB-206ENST00000461708 TAF5LO75529 589 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 NF2P35240 595 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 FKBP1AP62942 108 aaKnown RBP22.62■■□□□ 1.21
SSB-206ENST00000461708 LDHAL6AQ6ZMR3 332 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 ZNF804AQ7Z570 1209 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 KIAA0825Q8IV33 1275 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 MTMR14Q8NCE2 650 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 RNF186Q9NXI6 227 aa22.62■■□□□ 1.21
SSB-206ENST00000461708 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
SSB-206ENST00000461708 MCOLN1Q9GZU1 580 aa22.61■■□□□ 1.21
SSB-206ENST00000461708 COL1A1P02452 1464 aaPredicted RBP22.6■■□□□ 1.21
SSB-206ENST00000461708 UTYO14607 1347 aa22.6■■□□□ 1.21
SSB-206ENST00000461708 SNAP23O00161 211 aa22.6■■□□□ 1.21
SSB-206ENST00000461708 SASH1O94885 1247 aa22.6■■□□□ 1.21
SSB-206ENST00000461708 TAF7LQ5H9L4 462 aa22.6■■□□□ 1.21
SSB-206ENST00000461708 TRPA1O75762 1119 aa22.59■■□□□ 1.21
SSB-206ENST00000461708 SLC4A10Q6U841 1118 aa22.59■■□□□ 1.21
SSB-206ENST00000461708 CERS5Q8N5B7 392 aa22.59■■□□□ 1.21
SSB-206ENST00000461708 CNNM1Q9NRU3 951 aa22.59■■□□□ 1.21
SSB-206ENST00000461708 SCAF8Q9UPN6 1271 aaKnown RBP22.59■■□□□ 1.21
SSB-206ENST00000461708 UBE2Q2LH0YL09 131 aa22.58■■□□□ 1.21
SSB-206ENST00000461708 RGS19P49795 217 aa22.58■■□□□ 1.21
SSB-206ENST00000461708 DLGAP5Q15398 846 aa22.58■■□□□ 1.21
SSB-206ENST00000461708 PRAMEF18Q5VWM3 479 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms