RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 RNF181Q9P0P0 153 aa13.95□□□□□ -0.18
SSBP1-202ENST00000461433 RAB11FIP3O75154 756 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 TIMM10P62072 90 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 ATP2B3Q16720 1220 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 HSP90AB4PQ58FF6 505 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 LARGE2Q8N3Y3 721 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 RHPN1Q8TCX5 695 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 LPIN2Q92539 896 aa13.94□□□□□ -0.18
SSBP1-202ENST00000461433 SCN9AQ15858 1988 aa13.93□□□□□ -0.18
SSBP1-202ENST00000461433 DOK7Q18PE1 504 aa13.93□□□□□ -0.18
SSBP1-202ENST00000461433 ERC1Q8IUD2 1116 aa13.93□□□□□ -0.18
SSBP1-202ENST00000461433 FAM84BQ96KN1 310 aaPredicted RBP13.93□□□□□ -0.18
SSBP1-202ENST00000461433 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
SSBP1-202ENST00000461433 ZNF609O15014 1411 aa13.93□□□□□ -0.18
SSBP1-202ENST00000461433 ZNF646O15015 1829 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-202ENST00000461433 A0A1B0GUL7 405 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 YDJCA8MPS7 323 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 APBB1O00213 710 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 GYG1P46976 350 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 TNNI3KQ59H18 835 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 RWDD1Q9H446 243 aaPredicted RBP13.92□□□□□ -0.18
SSBP1-202ENST00000461433 DBNDD1Q9H9R9 158 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 AKAP2Q9Y2D5 859 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 FPGT-TNNI3KV9GXZ4 949 aa13.92□□□□□ -0.18
SSBP1-202ENST00000461433 FZD9O00144 591 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 NEFLP07196 543 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 ADORA1P30542 326 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 FBXO33Q7Z6M2 555 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 EAF2Q96CJ1 260 aaPredicted RBP13.91□□□□□ -0.18
SSBP1-202ENST00000461433 KIF1BPQ96EK5 621 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 IL1RAPL2Q9NP60 686 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 KCNQ5Q9NR82 932 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 PSME4Q14997 1843 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 ECE2O60344 883 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 IFIT1P09914 478 aaKnown RBP13.91□□□□□ -0.18
SSBP1-202ENST00000461433 SLC5A1P13866 664 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 SMC5Q8IY18 1101 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 NIM1KQ8IY84 436 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 JDP2Q8WYK2 163 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 CD209Q9NNX6 404 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
SSBP1-202ENST00000461433 HIBADHP31937 336 aaKnown RBP13.9□□□□□ -0.18
SSBP1-202ENST00000461433 BCAMP50895 628 aa13.9□□□□□ -0.18
SSBP1-202ENST00000461433 GCC1Q96CN9 775 aa13.9□□□□□ -0.18
SSBP1-202ENST00000461433 XAGE2Q96GT9 111 aa13.9□□□□□ -0.18
SSBP1-202ENST00000461433 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
SSBP1-202ENST00000461433 COA1Q9GZY4 146 aa13.9□□□□□ -0.18
SSBP1-202ENST00000461433 SMARCA5O60264 1052 aaPredicted RBP13.89□□□□□ -0.19
SSBP1-202ENST00000461433 IL1R1P14778 569 aa13.89□□□□□ -0.19
SSBP1-202ENST00000461433 PODNQ7Z5L7 613 aa13.89□□□□□ -0.19
SSBP1-202ENST00000461433 TDRD7Q8NHU6 1098 aaKnown RBP13.89□□□□□ -0.19
SSBP1-202ENST00000461433 NEUROD6Q96NK8 337 aa13.89□□□□□ -0.19
SSBP1-202ENST00000461433 TLR7Q9NYK1 1049 aaKnown RBP13.89□□□□□ -0.19
SSBP1-202ENST00000461433 ZNF541Q9H0D2 1346 aa13.89□□□□□ -0.19
SSBP1-202ENST00000461433 PHKA1P46020 1223 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 CXCL9Q07325 125 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 ZNF804AQ7Z570 1209 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 DBNDD2Q9BQY9 259 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
SSBP1-202ENST00000461433 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
SSBP1-202ENST00000461433 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
SSBP1-202ENST00000461433 CAVIN4Q5BKX8 364 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 AACSQ86V21 672 aa13.88□□□□□ -0.19
SSBP1-202ENST00000461433 CLASRPQ8N2M8 674 aaKnown RBP13.88□□□□□ -0.19
SSBP1-202ENST00000461433 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
SSBP1-202ENST00000461433 G3V3G9 751 aa13.87□□□□□ -0.19
SSBP1-202ENST00000461433 RAD17O75943 681 aa13.87□□□□□ -0.19
SSBP1-202ENST00000461433 DCAF8Q5TAQ9 597 aa13.87□□□□□ -0.19
SSBP1-202ENST00000461433 ERICH6BQ5W0A0 696 aa13.87□□□□□ -0.19
SSBP1-202ENST00000461433 ZBTB22O15209 634 aa13.86□□□□□ -0.19
SSBP1-202ENST00000461433 ANKRD45Q5TZF3 282 aa13.86□□□□□ -0.19
SSBP1-202ENST00000461433 C16orf71Q8IYS4 520 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-202ENST00000461433 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-202ENST00000461433 AKAP11Q9UKA4 1901 aa13.86□□□□□ -0.19
SSBP1-202ENST00000461433 KDM2BQ8NHM5 1336 aa13.86□□□□□ -0.19
SSBP1-202ENST00000461433 COL1A1P02452 1464 aaPredicted RBP13.86□□□□□ -0.19
SSBP1-202ENST00000461433 PSMD14O00487 310 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 EIF6P56537 245 aaKnown RBP13.85□□□□□ -0.19
SSBP1-202ENST00000461433 VPS37DQ86XT2 251 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 USP17L3A6NCW0 530 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 USP17L4A6NCW7 530 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 GLTPD2A6NH11 291 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 DDNO94850 711 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-202ENST00000461433 VIL1P09327 827 aaKnown RBP13.85□□□□□ -0.19
SSBP1-202ENST00000461433 ARID4AP29374 1257 aaPredicted RBP13.85□□□□□ -0.19
SSBP1-202ENST00000461433 GTF2IP78347 998 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 NUCB1Q02818 461 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 DACT2Q5SW24 774 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 CIAPIN1Q6FI81 312 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 USP17L1Q7RTZ2 530 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 BCL11AQ9H165 835 aa13.85□□□□□ -0.19
SSBP1-202ENST00000461433 FAM205AQ6ZU69 1335 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 IFIT2P09913 472 aaKnown RBP13.84□□□□□ -0.19
SSBP1-202ENST00000461433 RASGRF1Q13972 1273 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 SCARF1Q14162 830 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 GORABQ5T7V8 394 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 STRIP1Q5VSL9 837 aa13.84□□□□□ -0.19
SSBP1-202ENST00000461433 TTLL5Q6EMB2 1281 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms