RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 USP17L8P0C7I0 530 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 ATP2B4P23634 1241 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 USP17L1Q7RTZ2 530 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 AGBL3Q8NEM8 1001 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 TTLL11Q8NHH1 800 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.43■□□□□ 0.7
LMNA-209ENST00000459904 MINPP1Q9UNW1 487 aa19.43■□□□□ 0.7
LMNA-209ENST00000459904 FZD1Q9UP38 647 aa19.42■□□□□ 0.7
LMNA-209ENST00000459904 SNAP23O00161 211 aa19.41■□□□□ 0.7
LMNA-209ENST00000459904 SASH1O94885 1247 aa19.41■□□□□ 0.7
LMNA-209ENST00000459904 DDX58O95786 925 aaKnown RBP19.41■□□□□ 0.7
LMNA-209ENST00000459904 PRKG1Q13976 671 aa19.41■□□□□ 0.7
LMNA-209ENST00000459904 KSR2Q6VAB6 950 aa19.41■□□□□ 0.7
LMNA-209ENST00000459904 CCT4P50991 539 aaKnown RBP19.4■□□□□ 0.7
LMNA-209ENST00000459904 UBE3BQ7Z3V4 1068 aa19.4■□□□□ 0.7
LMNA-209ENST00000459904 CACNA1FO60840 1977 aa19.39■□□□□ 0.7
LMNA-209ENST00000459904 NEURL1BA8MQ27 555 aa19.39■□□□□ 0.69
LMNA-209ENST00000459904 TBC1D8O95759 1140 aa19.39■□□□□ 0.69
LMNA-209ENST00000459904 DACT2Q5SW24 774 aa19.39■□□□□ 0.69
LMNA-209ENST00000459904 CDC5LQ99459 802 aaKnown RBP19.39■□□□□ 0.69
LMNA-209ENST00000459904 ZNF609O15014 1411 aa19.38■□□□□ 0.69
LMNA-209ENST00000459904 HSP90B1P14625 803 aaKnown RBP19.38■□□□□ 0.69
LMNA-209ENST00000459904 CALD1Q05682 793 aaKnown RBP19.38■□□□□ 0.69
LMNA-209ENST00000459904 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
LMNA-209ENST00000459904 ECM29Q5VYK3 1845 aa19.38■□□□□ 0.69
LMNA-209ENST00000459904 BSDC1Q9NW68 430 aaPredicted RBP19.38■□□□□ 0.69
LMNA-209ENST00000459904 SAGE1Q9NXZ1 904 aa19.38■□□□□ 0.69
LMNA-209ENST00000459904 MED23Q9ULK4 1368 aa19.38■□□□□ 0.69
LMNA-209ENST00000459904 SLC34A2O95436 690 aa19.37■□□□□ 0.69
LMNA-209ENST00000459904 PODNQ7Z5L7 613 aa19.37■□□□□ 0.69
LMNA-209ENST00000459904 SALL2Q9Y467 1007 aaPredicted RBP19.37■□□□□ 0.69
LMNA-209ENST00000459904 PCDHAC2Q9Y5I4 1007 aa19.37■□□□□ 0.69
LMNA-209ENST00000459904 H7C1W4 665 aa19.36■□□□□ 0.69
LMNA-209ENST00000459904 WNT10BO00744 389 aa19.36■□□□□ 0.69
LMNA-209ENST00000459904 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
LMNA-209ENST00000459904 KIAA0825Q8IV33 1275 aa19.36■□□□□ 0.69
LMNA-209ENST00000459904 HELBQ8NG08 1087 aaPredicted RBP19.36■□□□□ 0.69
LMNA-209ENST00000459904 ITGA6P23229 1130 aa19.35■□□□□ 0.69
LMNA-209ENST00000459904 NEXNQ0ZGT2 675 aa19.35■□□□□ 0.69
LMNA-209ENST00000459904 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
LMNA-209ENST00000459904 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
LMNA-209ENST00000459904 R3HDMLQ9H3Y0 253 aa19.35■□□□□ 0.69
LMNA-209ENST00000459904 PITPNM2Q9BZ72 1349 aa19.34■□□□□ 0.69
LMNA-209ENST00000459904 GTF2IP78347 998 aa19.34■□□□□ 0.69
LMNA-209ENST00000459904 TAF5LO75529 589 aa19.33■□□□□ 0.68
LMNA-209ENST00000459904 CASP7P55210 303 aa19.33■□□□□ 0.68
LMNA-209ENST00000459904 PTPN12Q05209 780 aaKnown RBP19.33■□□□□ 0.68
LMNA-209ENST00000459904 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.68
LMNA-209ENST00000459904 CTU1Q7Z7A3 348 aaKnown RBP19.33■□□□□ 0.68
LMNA-209ENST00000459904 WWC1Q8IX03 1113 aa19.33■□□□□ 0.68
LMNA-209ENST00000459904 JAG2Q9Y219 1238 aa19.33■□□□□ 0.68
LMNA-209ENST00000459904 ZNF804BA4D1E1 1349 aa19.32■□□□□ 0.68
LMNA-209ENST00000459904 AOX1Q06278 1338 aa19.32■□□□□ 0.68
LMNA-209ENST00000459904 IGHMBP2P38935 993 aaKnown RBP19.32■□□□□ 0.68
LMNA-209ENST00000459904 GCKRQ14397 625 aa19.32■□□□□ 0.68
LMNA-209ENST00000459904 ZNF296Q8WUU4 475 aaPredicted RBP19.32■□□□□ 0.68
LMNA-209ENST00000459904 COA1Q9GZY4 146 aa19.32■□□□□ 0.68
LMNA-209ENST00000459904 CHRNDQ07001 517 aa19.31■□□□□ 0.68
LMNA-209ENST00000459904 FLIIQ13045 1269 aa19.31■□□□□ 0.68
LMNA-209ENST00000459904 STRIP1Q5VSL9 837 aa19.31■□□□□ 0.68
LMNA-209ENST00000459904 F6X3S4 739 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 F8W031 263 aaPredicted RBP19.3■□□□□ 0.68
LMNA-209ENST00000459904 FKBP1BP68106 108 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
LMNA-209ENST00000459904 OGFOD1Q8N543 542 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 CERS5Q8N5B7 392 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 HPS5Q9UPZ3 1129 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 LEMD3Q9Y2U8 911 aa19.3■□□□□ 0.68
LMNA-209ENST00000459904 DNAAF4Q8WXU2 420 aa19.29■□□□□ 0.68
LMNA-209ENST00000459904 MPHOSPH8Q99549 860 aa19.29■□□□□ 0.68
LMNA-209ENST00000459904 HDAC9Q9UKV0 1011 aa19.29■□□□□ 0.68
LMNA-209ENST00000459904 CENPFP49454 3210 aa19.29■□□□□ 0.68
LMNA-209ENST00000459904 OTOFQ9HC10 1997 aa19.28■□□□□ 0.68
LMNA-209ENST00000459904 CSF1RP07333 972 aa19.28■□□□□ 0.68
LMNA-209ENST00000459904 KCNJ4P48050 445 aa19.28■□□□□ 0.68
LMNA-209ENST00000459904 ZNF594Q96JF6 807 aaPredicted RBP19.28■□□□□ 0.68
LMNA-209ENST00000459904 CD209Q9NNX6 404 aa19.28■□□□□ 0.68
LMNA-209ENST00000459904 ANGEL1Q9UNK9 670 aaKnown RBP19.28■□□□□ 0.68
LMNA-209ENST00000459904 CHMP3Q9Y3E7 222 aa19.28■□□□□ 0.68
LMNA-209ENST00000459904 FANCIQ9NVI1 1328 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 CLRN2A0PK11 232 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 PLIN1O60240 522 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 EPHA10Q5JZY3 1008 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 ZBED3Q96IU2 234 aaPredicted RBP19.27■□□□□ 0.68
LMNA-209ENST00000459904 CLMNQ96JQ2 1002 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 PLA2G12BQ9BX93 195 aa19.27■□□□□ 0.68
LMNA-209ENST00000459904 SSC5DA1L4H1 1573 aa19.27■□□□□ 0.67
LMNA-209ENST00000459904 IRS2Q9Y4H2 1338 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 HTTP42858 3142 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 GPR25O00155 361 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 TM4SF4P48230 202 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 FOXO4P98177 505 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 ANKRD2Q9GZV1 360 aa19.26■□□□□ 0.67
LMNA-209ENST00000459904 MYO3BQ8WXR4 1341 aa19.25■□□□□ 0.67
LMNA-209ENST00000459904 NF2P35240 595 aa19.25■□□□□ 0.67
LMNA-209ENST00000459904 EXOSC9Q06265 439 aaKnown RBP19.25■□□□□ 0.67
LMNA-209ENST00000459904 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
LMNA-209ENST00000459904 ANKRD18BA2A2Z9 1011 aa19.24■□□□□ 0.67
LMNA-209ENST00000459904 VAMP4O75379 141 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms