RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 PFKFB2O60825 505 aa22.94■■□□□ 1.26
CNEP1R1-203ENST00000458059 A1BGP04217 495 aa22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 IFIT1P09914 478 aaKnown RBP22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 FER1L4A9Z1Z3 1794 aa22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 LRP10Q7Z4F1 713 aa22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 PROSER2Q86WR7 435 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 SMAP1Q8IYB5 467 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 IFNL2Q8IZJ0 200 aa22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 ALDH8A1Q9H2A2 487 aaPredicted RBP22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 RGPD5Q99666 1765 aa22.93■■□□□ 1.26
CNEP1R1-203ENST00000458059 M0R2C6 588 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 SKILP12757 684 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 SF3A1Q15459 793 aaKnown RBP22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 SNW1Q13573 536 aaKnown RBP22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 STX1AQ16623 288 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 PI16Q6UXB8 463 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 ILDR1Q86SU0 546 aaPredicted RBP22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 CCDC112Q8NEF3 446 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 SMARCC2Q8TAQ2 1214 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 PTPN21Q16825 1174 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 LRRC8AQ8IWT6 810 aa22.92■■□□□ 1.26
CNEP1R1-203ENST00000458059 MAST3O60307 1309 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 CCDC69A6NI79 296 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 ZSCAN20P17040 1043 aaPredicted RBP22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 PDIA3P30101 505 aaKnown RBP22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 ATG9AQ7Z3C6 839 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 JCADQ9P266 1359 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 C5P01031 1676 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 GORABQ5T7V8 394 aa22.91■■□□□ 1.26
CNEP1R1-203ENST00000458059 ADGRL3Q9HAR2 1447 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 NBPF26B4DH59 902 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 NBPF14Q5TI25 921 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 NBPF10Q6P3W6 841 aaKnown RBP22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 NBPF15Q8N660 670 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 A0A1B0GUL7 405 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 RXRAP19793 462 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 CEP135Q66GS9 1140 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 PCDHA7Q9UN72 937 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 CLIC4Q9Y696 253 aa22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 CHD2O14647 1828 aaKnown RBP22.9■■□□□ 1.26
CNEP1R1-203ENST00000458059 RABL6Q3YEC7 729 aaPredicted RBP22.89■■□□□ 1.26
CNEP1R1-203ENST00000458059 RCOR1Q9UKL0 485 aa22.89■■□□□ 1.26
CNEP1R1-203ENST00000458059 MEGF6O75095 1541 aa22.89■■□□□ 1.26
CNEP1R1-203ENST00000458059 PDIA4P13667 645 aaKnown RBP22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 ADORA1P30542 326 aa22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 FOXO4P98177 505 aa22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 DHX40Q8IX18 779 aaKnown RBP22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 OSBP2Q969R2 916 aa22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 NDUFA8P51970 172 aa22.89■■□□□ 1.25
CNEP1R1-203ENST00000458059 SMC2O95347 1197 aa22.88■■□□□ 1.25
CNEP1R1-203ENST00000458059 STK38Q15208 465 aa22.88■■□□□ 1.25
CNEP1R1-203ENST00000458059 DENND2AQ9ULE3 1009 aa22.88■■□□□ 1.25
CNEP1R1-203ENST00000458059 FDPSP14324 419 aaKnown RBP22.88■■□□□ 1.25
CNEP1R1-203ENST00000458059 FAM160A1Q05DH4 1040 aa22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 DPCR1Q3MIW9 517 aa22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 ANKRD7Q92527 254 aa22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 SMTNL1A8MU46 457 aa22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 CTIFO43310 598 aaKnown RBP22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 CASP7P55210 303 aa22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 EXOSC10Q01780 885 aaKnown RBP22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 ZRSR1Q15695 479 aaKnown RBP22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 ZNF396Q96N95 335 aaPredicted RBP22.87■■□□□ 1.25
CNEP1R1-203ENST00000458059 STK11IPQ8N1F8 1099 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 CARMIL3Q8ND23 1372 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 MARCKSP29966 332 aaPredicted RBP22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 NAA16Q6N069 864 aaPredicted RBP22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 PLBD2Q8NHP8 589 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 AIFM3Q96NN9 605 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 KLF18A0A0U1RQI7 1052 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 ZMYM1Q5SVZ6 1142 aa22.86■■□□□ 1.25
CNEP1R1-203ENST00000458059 GOLGA8BA8MQT2 603 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 SCARF1Q14162 830 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 PTPN14Q15678 1187 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 CEP57L1Q8IYX8 460 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 ANO10Q9NW15 660 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 SH3TC1Q8TE82 1336 aa22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 RNF113AO15541 343 aaKnown RBP22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 HMGB1P09429 215 aaKnown RBP22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 CWC25Q9NXE8 425 aaPredicted RBP22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 ZNF215Q9UL58 517 aaPredicted RBP22.85■■□□□ 1.25
CNEP1R1-203ENST00000458059 ENGASEQ8NFI3 743 aa22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 MRPS27Q92552 414 aaKnown RBP22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 LLPHQ9BRT6 129 aaKnown RBP22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 USP54Q70EL1 1684 aa22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 DCAF5Q96JK2 942 aa22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 C8orf76Q96K31 380 aa22.84■■□□□ 1.25
CNEP1R1-203ENST00000458059 CPLX1O14810 134 aa22.83■■□□□ 1.25
CNEP1R1-203ENST00000458059 HSP90AA4PQ58FG1 418 aa22.83■■□□□ 1.25
CNEP1R1-203ENST00000458059 HELLSQ9NRZ9 838 aa22.83■■□□□ 1.25
CNEP1R1-203ENST00000458059 ORC3Q9UBD5 711 aaPredicted RBP22.83■■□□□ 1.25
CNEP1R1-203ENST00000458059 TMC6Q7Z403 805 aa22.83■■□□□ 1.24
CNEP1R1-203ENST00000458059 DSCC1Q9BVC3 393 aa22.83■■□□□ 1.24
CNEP1R1-203ENST00000458059 IFNKQ9P0W0 207 aa22.83■■□□□ 1.24
CNEP1R1-203ENST00000458059 AFDNP55196 1824 aaKnown RBP22.82■■□□□ 1.24
CNEP1R1-203ENST00000458059 TTC39AQ5SRH9 613 aa22.82■■□□□ 1.24
CNEP1R1-203ENST00000458059 SYNE4Q8N205 404 aa22.82■■□□□ 1.24
CNEP1R1-203ENST00000458059 EYA2O00167 538 aa22.82■■□□□ 1.24
CNEP1R1-203ENST00000458059 PRC1O43663 620 aa22.82■■□□□ 1.24
CNEP1R1-203ENST00000458059 DMTNQ08495 405 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms