RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 HIRAP54198 1017 aaPredicted RBP20.39■□□□□ 0.86
CPSF6-203ENST00000456847 TXNRD3Q86VQ6 643 aa20.39■□□□□ 0.86
CPSF6-203ENST00000456847 ZNF646O15015 1829 aaPredicted RBP20.39■□□□□ 0.86
CPSF6-203ENST00000456847 AGBL3Q8NEM8 1001 aa20.39■□□□□ 0.85
CPSF6-203ENST00000456847 ZC3H15Q8WU90 426 aaKnown RBP20.39■□□□□ 0.85
CPSF6-203ENST00000456847 ZNF609O15014 1411 aa20.39■□□□□ 0.85
CPSF6-203ENST00000456847 TRAF5O00463 557 aa20.38■□□□□ 0.85
CPSF6-203ENST00000456847 BRPF1P55201 1214 aaPredicted RBP20.38■□□□□ 0.85
CPSF6-203ENST00000456847 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
CPSF6-203ENST00000456847 USP44Q9H0E7 712 aa20.38■□□□□ 0.85
CPSF6-203ENST00000456847 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.85
CPSF6-203ENST00000456847 RABL6Q3YEC7 729 aaPredicted RBP20.37■□□□□ 0.85
CPSF6-203ENST00000456847 GLIS2Q9BZE0 524 aaPredicted RBP20.37■□□□□ 0.85
CPSF6-203ENST00000456847 ABT1Q9ULW3 272 aaKnown RBP20.37■□□□□ 0.85
CPSF6-203ENST00000456847 SNAP23O00161 211 aa20.37■□□□□ 0.85
CPSF6-203ENST00000456847 ANKRD44Q8N8A2 993 aa20.37■□□□□ 0.85
CPSF6-203ENST00000456847 JMYQ8N9B5 988 aa20.37■□□□□ 0.85
CPSF6-203ENST00000456847 CNTNAP1P78357 1384 aa20.36■□□□□ 0.85
CPSF6-203ENST00000456847 EGFRP00533 1210 aa20.35■□□□□ 0.85
CPSF6-203ENST00000456847 UBTFL1P0CB47 393 aaPredicted RBP20.35■□□□□ 0.85
CPSF6-203ENST00000456847 PGAP2Q9UHJ9 254 aa20.35■□□□□ 0.85
CPSF6-203ENST00000456847 CDC37L1Q7L3B6 337 aa20.35■□□□□ 0.85
CPSF6-203ENST00000456847 ZNF804AQ7Z570 1209 aa20.35■□□□□ 0.85
CPSF6-203ENST00000456847 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
CPSF6-203ENST00000456847 POLR2AP24928 1970 aaKnown RBP20.34■□□□□ 0.85
CPSF6-203ENST00000456847 MYO3BQ8WXR4 1341 aa20.34■□□□□ 0.85
CPSF6-203ENST00000456847 USP17L8P0C7I0 530 aa20.34■□□□□ 0.85
CPSF6-203ENST00000456847 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
CPSF6-203ENST00000456847 STRIP1Q5VSL9 837 aa20.34■□□□□ 0.85
CPSF6-203ENST00000456847 ZNF408Q9H9D4 720 aa20.34■□□□□ 0.85
CPSF6-203ENST00000456847 FRAT1Q92837 279 aaPredicted RBP20.33■□□□□ 0.85
CPSF6-203ENST00000456847 DCPSQ96C86 337 aaKnown RBP20.33■□□□□ 0.85
CPSF6-203ENST00000456847 MXD3Q9BW11 206 aa20.33■□□□□ 0.85
CPSF6-203ENST00000456847 CD209Q9NNX6 404 aa20.33■□□□□ 0.85
CPSF6-203ENST00000456847 IPO8O15397 1037 aaKnown RBP20.33■□□□□ 0.84
CPSF6-203ENST00000456847 ZNF280AP59817 542 aaPredicted RBP20.33■□□□□ 0.84
CPSF6-203ENST00000456847 GTF2IP78347 998 aa20.33■□□□□ 0.84
CPSF6-203ENST00000456847 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.84
CPSF6-203ENST00000456847 C15orf52Q6ZUT6 534 aaKnown RBP20.33■□□□□ 0.84
CPSF6-203ENST00000456847 GMLQ99445 158 aa20.33■□□□□ 0.84
CPSF6-203ENST00000456847 MROH5Q6ZUA9 1318 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 CELF2O95319 508 aaKnown RBP20.32■□□□□ 0.84
CPSF6-203ENST00000456847 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 ARHGAP45Q92619 1136 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 MYOZ2Q9NPC6 264 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 ZBED9Q6R2W3 1325 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 IRS2Q9Y4H2 1338 aa20.32■□□□□ 0.84
CPSF6-203ENST00000456847 METTL24Q5JXM2 366 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 PAXIP1Q6ZW49 1069 aaPredicted RBP20.31■□□□□ 0.84
CPSF6-203ENST00000456847 KRT26Q7Z3Y9 468 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 OGFOD1Q8N543 542 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 BCAR3O75815 825 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 UBE4AQ14139 1066 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 DEFB115Q30KQ5 88 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 LRRC24Q50LG9 513 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 KLHDC4Q8TBB5 520 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 HDAC5Q9UQL6 1122 aa20.31■□□□□ 0.84
CPSF6-203ENST00000456847 RIPOR2Q9Y4F9 1068 aa20.3■□□□□ 0.84
CPSF6-203ENST00000456847 RASSF10A6NK89 507 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 SCARF1Q14162 830 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 CST9Q5W186 159 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 ADM5C9JUS6 153 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 VEGFBP49765 207 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 SULF1Q8IWU6 871 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 HDAC9Q9UKV0 1011 aa20.29■□□□□ 0.84
CPSF6-203ENST00000456847 LRRFIP2Q9Y608 721 aaKnown RBP20.29■□□□□ 0.84
CPSF6-203ENST00000456847 ASTN2O75129 1339 aaPredicted RBP20.29■□□□□ 0.84
CPSF6-203ENST00000456847 ATF7IPQ6VMQ6 1270 aa20.28■□□□□ 0.84
CPSF6-203ENST00000456847 KIAA0825Q8IV33 1275 aa20.28■□□□□ 0.84
CPSF6-203ENST00000456847 MEIS3Q99687 375 aa20.28■□□□□ 0.84
CPSF6-203ENST00000456847 TRIM27P14373 513 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 IL1R1P14778 569 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 ANGEL2Q5VTE6 544 aaKnown RBP20.27■□□□□ 0.84
CPSF6-203ENST00000456847 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.84
CPSF6-203ENST00000456847 TLL2Q9Y6L7 1015 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 HSPA1AP0DMV8 641 aaKnown RBP20.27■□□□□ 0.84
CPSF6-203ENST00000456847 HSPA1BP0DMV9 641 aaKnown RBP20.27■□□□□ 0.84
CPSF6-203ENST00000456847 GYG1P46976 350 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 GRM1Q13255 1194 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 CLUAP1Q96AJ1 413 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 JAG2Q9Y219 1238 aa20.27■□□□□ 0.84
CPSF6-203ENST00000456847 HIBADHP31937 336 aaKnown RBP20.26■□□□□ 0.83
CPSF6-203ENST00000456847 DLK2Q6UY11 383 aa20.26■□□□□ 0.83
CPSF6-203ENST00000456847 TNNQ9UQP3 1299 aa20.26■□□□□ 0.83
CPSF6-203ENST00000456847 ARAP2Q8WZ64 1704 aa20.26■□□□□ 0.83
CPSF6-203ENST00000456847 GNAI3P08754 354 aa20.25■□□□□ 0.83
CPSF6-203ENST00000456847 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
CPSF6-203ENST00000456847 VPS37DQ86XT2 251 aa20.25■□□□□ 0.83
CPSF6-203ENST00000456847 EYA2O00167 538 aa20.25■□□□□ 0.83
CPSF6-203ENST00000456847 PDE8BO95263 885 aa20.25■□□□□ 0.83
CPSF6-203ENST00000456847 RFX5P48382 616 aaPredicted RBP20.25■□□□□ 0.83
CPSF6-203ENST00000456847 WDR33Q9C0J8 1336 aaKnown RBP20.24■□□□□ 0.83
CPSF6-203ENST00000456847 MYH13Q9UKX3 1938 aa20.24■□□□□ 0.83
CPSF6-203ENST00000456847 SASH1O94885 1247 aa20.24■□□□□ 0.83
CPSF6-203ENST00000456847 ECE1P42892 770 aa20.24■□□□□ 0.83
CPSF6-203ENST00000456847 MMP14P50281 582 aa20.24■□□□□ 0.83
CPSF6-203ENST00000456847 PTPN12Q05209 780 aaKnown RBP20.24■□□□□ 0.83
CPSF6-203ENST00000456847 SIL1Q9H173 461 aa20.24■□□□□ 0.83
CPSF6-203ENST00000456847 PITPNM2Q9BZ72 1349 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms