RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 ZNF646O15015 1829 aaPredicted RBP17.42■□□□□ 0.38
TIMP1-205ENST00000456754 ARAP2Q8WZ64 1704 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 ZNF609O15014 1411 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 SMARCA5O60264 1052 aaPredicted RBP17.41■□□□□ 0.38
TIMP1-205ENST00000456754 ECE2O60344 883 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 PUM3Q15397 648 aaKnown RBP17.41■□□□□ 0.38
TIMP1-205ENST00000456754 ATP2B3Q16720 1220 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 EYA3Q99504 573 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 ZC3H12CQ9C0D7 883 aaKnown RBP17.41■□□□□ 0.38
TIMP1-205ENST00000456754 IL1RAPL2Q9NP60 686 aa17.41■□□□□ 0.38
TIMP1-205ENST00000456754 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
TIMP1-205ENST00000456754 NIM1KQ8IY84 436 aa17.4■□□□□ 0.38
TIMP1-205ENST00000456754 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
TIMP1-205ENST00000456754 IQSEC3Q9UPP2 1182 aaPredicted RBP17.4■□□□□ 0.38
TIMP1-205ENST00000456754 JAG2Q9Y219 1238 aa17.4■□□□□ 0.38
TIMP1-205ENST00000456754 A0A1B0GUL7 405 aa17.39■□□□□ 0.37
TIMP1-205ENST00000456754 RAD17O75943 681 aa17.39■□□□□ 0.37
TIMP1-205ENST00000456754 BCAMP50895 628 aa17.39■□□□□ 0.37
TIMP1-205ENST00000456754 RHPN1Q8TCX5 695 aa17.39■□□□□ 0.37
TIMP1-205ENST00000456754 FAM84BQ96KN1 310 aaPredicted RBP17.39■□□□□ 0.37
TIMP1-205ENST00000456754 DCTPP1Q9H773 170 aa17.39■□□□□ 0.37
TIMP1-205ENST00000456754 FZD9O00144 591 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 TNNI3KQ59H18 835 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 C15orf52Q6ZUT6 534 aaKnown RBP17.38■□□□□ 0.37
TIMP1-205ENST00000456754 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 LPIN2Q92539 896 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 EAF2Q96CJ1 260 aaPredicted RBP17.38■□□□□ 0.37
TIMP1-205ENST00000456754 MXD3Q9BW11 206 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 FPGT-TNNI3KV9GXZ4 949 aa17.38■□□□□ 0.37
TIMP1-205ENST00000456754 SLC5A1P13866 664 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 CXCL9Q07325 125 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 HDAC1Q13547 482 aaPredicted RBP17.37■□□□□ 0.37
TIMP1-205ENST00000456754 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
TIMP1-205ENST00000456754 XAGE2Q96GT9 111 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 NEUROD6Q96NK8 337 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 DBNDD2Q9BQY9 259 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 CCDC8Q9H0W5 538 aaPredicted RBP17.37■□□□□ 0.37
TIMP1-205ENST00000456754 CD209Q9NNX6 404 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 ZNRF3Q9ULT6 936 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 PSME4Q14997 1843 aa17.37■□□□□ 0.37
TIMP1-205ENST00000456754 COL1A1P02452 1464 aaPredicted RBP17.37■□□□□ 0.37
TIMP1-205ENST00000456754 DDNO94850 711 aaPredicted RBP17.36■□□□□ 0.37
TIMP1-205ENST00000456754 PHKA1P46020 1223 aa17.36■□□□□ 0.37
TIMP1-205ENST00000456754 FBXO33Q7Z6M2 555 aa17.36■□□□□ 0.37
TIMP1-205ENST00000456754 VPS33BQ9H267 617 aa17.36■□□□□ 0.37
TIMP1-205ENST00000456754 G3V3G9 751 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 IFIT1P09914 478 aaKnown RBP17.35■□□□□ 0.37
TIMP1-205ENST00000456754 DCAF8Q5TAQ9 597 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 FBXW7Q969H0 707 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 COA1Q9GZY4 146 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 DBNLQ9UJU6 430 aaKnown RBP17.35■□□□□ 0.37
TIMP1-205ENST00000456754 GJA3Q9Y6H8 435 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
TIMP1-205ENST00000456754 SHTN1A0MZ66 631 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 PSMD14O00487 310 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 YY1P25490 414 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 HIBADHP31937 336 aaKnown RBP17.34■□□□□ 0.37
TIMP1-205ENST00000456754 AAMPQ13685 434 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 ZNF804AQ7Z570 1209 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 AACSQ86V21 672 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
TIMP1-205ENST00000456754 ZBTB12Q9Y330 459 aaPredicted RBP17.34■□□□□ 0.37
TIMP1-205ENST00000456754 RAB11FIP3O75154 756 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 IL1R1P14778 569 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
TIMP1-205ENST00000456754 HSP90AB4PQ58FF6 505 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 CCDC102BQ68D86 513 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 ERC1Q8IUD2 1116 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 C16orf71Q8IYS4 520 aaPredicted RBP17.33■□□□□ 0.36
TIMP1-205ENST00000456754 TDRD7Q8NHU6 1098 aaKnown RBP17.33■□□□□ 0.36
TIMP1-205ENST00000456754 OTUD7AQ8TE49 926 aaPredicted RBP17.33■□□□□ 0.36
TIMP1-205ENST00000456754 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.36
TIMP1-205ENST00000456754 NEFLP07196 543 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 GTF2IP78347 998 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 SCARF1Q14162 830 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 CIAPIN1Q6FI81 312 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 B4GALNT3Q6L9W6 998 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 PI16Q6UXB8 463 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 LRRCC1Q9C099 1032 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
TIMP1-205ENST00000456754 CHAF1AQ13111 956 aaPredicted RBP17.31■□□□□ 0.36
TIMP1-205ENST00000456754 GRIK5Q16478 980 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 CAVIN4Q5BKX8 364 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 PODNQ7Z5L7 613 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 CERS5Q8N5B7 392 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 RWDD1Q9H446 243 aaPredicted RBP17.31■□□□□ 0.36
TIMP1-205ENST00000456754 AKAP11Q9UKA4 1901 aa17.31■□□□□ 0.36
TIMP1-205ENST00000456754 GLTPD2A6NH11 291 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 POTECB2RU33 542 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 GMPSP49915 693 aaPredicted RBP17.3■□□□□ 0.36
TIMP1-205ENST00000456754 DACT2Q5SW24 774 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 SMC5Q8IY18 1101 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 NMRK2Q9NPI5 230 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 NDUFB9Q9Y6M9 179 aa17.3■□□□□ 0.36
TIMP1-205ENST00000456754 ZC3H4Q9UPT8 1303 aaKnown RBP17.29■□□□□ 0.36
TIMP1-205ENST00000456754 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
TIMP1-205ENST00000456754 RASGRF1Q13972 1273 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms