RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 FTOQ9C0B1 505 aaKnown RBP eCLIP20.74■□□□□ 0.91
PTPN6-204ENST00000456013 GOLIM4O00461 696 aa20.74■□□□□ 0.91
PTPN6-204ENST00000456013 FOXO4P98177 505 aa20.74■□□□□ 0.91
PTPN6-204ENST00000456013 DCAF5Q96JK2 942 aa20.74■□□□□ 0.91
PTPN6-204ENST00000456013 SPEF2Q9C093 1822 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 CBX1P83916 185 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 FAM160A1Q05DH4 1040 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 ATG9AQ7Z3C6 839 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 ZNF274Q96GC6 653 aaPredicted RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 PRDM10Q9NQV6 1147 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 PLEKHG2Q9H7P9 1386 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 E7EWF7 191 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 KINO60870 393 aaKnown RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 RBM6P78332 1123 aaKnown RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 CCT2P78371 535 aaKnown RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 TPD52L1Q16890 204 aaPredicted RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 UTP14CQ5TAP6 766 aaKnown RBP20.73■□□□□ 0.91
PTPN6-204ENST00000456013 CHMP4CQ96CF2 233 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 ANO10Q9NW15 660 aa20.73■□□□□ 0.91
PTPN6-204ENST00000456013 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 H7C1W4 665 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 HSPD1P10809 573 aaKnown RBP20.72■□□□□ 0.91
PTPN6-204ENST00000456013 ZSCAN20P17040 1043 aaPredicted RBP20.72■□□□□ 0.91
PTPN6-204ENST00000456013 FOSBP53539 338 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 NCBP1Q09161 790 aaKnown RBP20.72■□□□□ 0.91
PTPN6-204ENST00000456013 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 GLI3P10071 1580 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 COL18A1P39060 1754 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 DMTNQ08495 405 aa20.72■□□□□ 0.91
PTPN6-204ENST00000456013 PKD1L3Q7Z443 1732 aa20.71■□□□□ 0.91
PTPN6-204ENST00000456013 BECN2A8MW95 431 aa20.71■□□□□ 0.91
PTPN6-204ENST00000456013 PDIA3P30101 505 aaKnown RBP20.71■□□□□ 0.91
PTPN6-204ENST00000456013 SLFNL1Q499Z3 407 aa20.71■□□□□ 0.91
PTPN6-204ENST00000456013 DHX40Q8IX18 779 aaKnown RBP20.71■□□□□ 0.91
PTPN6-204ENST00000456013 ILDR1Q86SU0 546 aaPredicted RBP20.71■□□□□ 0.91
PTPN6-204ENST00000456013 NCOA5Q9HCD5 579 aaKnown RBP20.71■□□□□ 0.91
PTPN6-204ENST00000456013 CCDC9Q9Y3X0 531 aaKnown RBP20.71■□□□□ 0.91
PTPN6-204ENST00000456013 FBXL16Q8N461 479 aa20.7■□□□□ 0.9
PTPN6-204ENST00000456013 FSIP1Q8NA03 581 aa20.7■□□□□ 0.9
PTPN6-204ENST00000456013 CYP27B1O15528 508 aa20.7■□□□□ 0.9
PTPN6-204ENST00000456013 IL15P40933 162 aaPredicted RBP20.7■□□□□ 0.9
PTPN6-204ENST00000456013 TIMM10P62072 90 aa20.7■□□□□ 0.9
PTPN6-204ENST00000456013 CCDC112Q8NEF3 446 aa20.7■□□□□ 0.9
PTPN6-204ENST00000456013 CARMIL3Q8ND23 1372 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 TJP1Q07157 1748 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 NUP188Q5SRE5 1749 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 A0A0G2JLW4 131 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 ME1P48163 572 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 MAST3O60307 1309 aa20.69■□□□□ 0.9
PTPN6-204ENST00000456013 RNF113AO15541 343 aaKnown RBP20.68■□□□□ 0.9
PTPN6-204ENST00000456013 EVCP57679 992 aa20.68■□□□□ 0.9
PTPN6-204ENST00000456013 CEP135Q66GS9 1140 aa20.68■□□□□ 0.9
PTPN6-204ENST00000456013 CEP57L1Q8IYX8 460 aa20.68■□□□□ 0.9
PTPN6-204ENST00000456013 FEZ1Q99689 392 aa20.68■□□□□ 0.9
PTPN6-204ENST00000456013 U2AF2P26368 475 aaKnown RBP eCLIP20.68■□□□□ 0.9
PTPN6-204ENST00000456013 RTEL1Q9NZ71 1219 aa20.68■□□□□ 0.9
PTPN6-204ENST00000456013 IFIT1P09914 478 aaKnown RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 ARID5BQ14865 1188 aa20.67■□□□□ 0.9
PTPN6-204ENST00000456013 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 MRPS27Q92552 414 aaKnown RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 NAP1L2Q9ULW6 460 aaPredicted RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 PCDHA7Q9UN72 937 aa20.67■□□□□ 0.9
PTPN6-204ENST00000456013 FDPSP14324 419 aaKnown RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 GUCY1B3Q02153 619 aa20.67■□□□□ 0.9
PTPN6-204ENST00000456013 ADALQ6DHV7 355 aa20.67■□□□□ 0.9
PTPN6-204ENST00000456013 NAT10Q9H0A0 1025 aaKnown RBP20.67■□□□□ 0.9
PTPN6-204ENST00000456013 A0A1W2PQ27 194 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 A0A1W2PQ64 194 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 A0A1W2PQD8 194 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 SKILP12757 684 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 CABP4P57796 275 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.66■□□□□ 0.9
PTPN6-204ENST00000456013 GTPBP4Q9BZE4 634 aaKnown RBP20.66■□□□□ 0.9
PTPN6-204ENST00000456013 CWC25Q9NXE8 425 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-204ENST00000456013 PARP4Q9UKK3 1724 aaKnown RBP20.66■□□□□ 0.9
PTPN6-204ENST00000456013 ADAMTSL3P82987 1691 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 SPDYE4A6NLX3 237 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 EYA2O00167 538 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 CCZ1BP86790 482 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 CCZ1P86791 482 aaPredicted RBP20.66■□□□□ 0.9
PTPN6-204ENST00000456013 NYAP1Q6ZVC0 841 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 NWD2Q9ULI1 1742 aa20.66■□□□□ 0.9
PTPN6-204ENST00000456013 CCDC69A6NI79 296 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 CHST3Q7LGC8 479 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 KCND1Q9NSA2 647 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 A0A087WWV3 80 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 USP27XA6NNY8 438 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 NBPF26B4DH59 902 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 CSB-PGBD3P0DP91 1061 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 NBPF14Q5TI25 921 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 NBPF10Q6P3W6 841 aaKnown RBP20.65■□□□□ 0.9
PTPN6-204ENST00000456013 NBPF15Q8N660 670 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 AOPEPQ8N6M6 819 aa20.65■□□□□ 0.9
PTPN6-204ENST00000456013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.64■□□□□ 0.89
PTPN6-204ENST00000456013 M0R2C6 588 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 CIAO1O76071 339 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 PTPN14Q15678 1187 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 LRRC24Q50LG9 513 aa20.64■□□□□ 0.89
PTPN6-204ENST00000456013 ATG3Q9NT62 314 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms