RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 ATP5JP18859 108 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 MCMDC2Q4G0Z9 681 aa15.94■□□□□ 0.14
PTPRE-204ENST00000455661 A0A1B0GVL5 298 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 DPCR1Q3MIW9 517 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 TXLNBQ8N3L3 684 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 EDC3Q96F86 508 aaKnown RBP15.93■□□□□ 0.14
PTPRE-204ENST00000455661 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 MED1Q15648 1581 aaPredicted RBP15.93■□□□□ 0.14
PTPRE-204ENST00000455661 DIP2BQ9P265 1576 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 RFX7Q2KHR2 1363 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 CTDNEP1O95476 244 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 RTEL1Q9NZ71 1219 aa15.93■□□□□ 0.14
PTPRE-204ENST00000455661 EFCAB8A8MWE9 144 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 NLRP12P59046 1061 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 APOBRQ0VD83 1088 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 GPS2Q13227 327 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 FMNL2Q96PY5 1086 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 NAP1L2Q9ULW6 460 aaPredicted RBP15.92■□□□□ 0.14
PTPRE-204ENST00000455661 COL15A1P39059 1388 aa15.92■□□□□ 0.14
PTPRE-204ENST00000455661 URI1O94763 535 aaPredicted RBP15.91■□□□□ 0.14
PTPRE-204ENST00000455661 SLC3A2P08195 630 aaKnown RBP15.91■□□□□ 0.14
PTPRE-204ENST00000455661 NDUFA8P51970 172 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 CCT2P78371 535 aaKnown RBP15.91■□□□□ 0.14
PTPRE-204ENST00000455661 STK38Q15208 465 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 SLIT1O75093 1534 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 NCAPD2Q15021 1401 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 VGLL3A8MV65 326 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 POLR3GO15318 223 aaPredicted RBP15.91■□□□□ 0.14
PTPRE-204ENST00000455661 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 CCDC158Q5M9N0 1113 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 KCNG4Q8TDN1 519 aa15.91■□□□□ 0.14
PTPRE-204ENST00000455661 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 LRRFIP1Q32MZ4 808 aaKnown RBP15.9■□□□□ 0.14
PTPRE-204ENST00000455661 ABTB2Q8N961 1025 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 TNRQ92752 1358 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 ZSCAN12O43309 604 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 FANCCQ00597 558 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 PLEKHG1Q9ULL1 1385 aa15.9■□□□□ 0.14
PTPRE-204ENST00000455661 ZNF609O15014 1411 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 TADA3O75528 432 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 CAPN2P17655 700 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 ZNF530Q6P9A1 599 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 ILDR1Q86SU0 546 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 KLHDC4Q8TBB5 520 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 BIN1O00499 593 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 IKBKBO14920 756 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 PSME1Q06323 249 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 PLEKHO1Q53GL0 409 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 LINC00301Q8NCQ3 95 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 ZNF274Q96GC6 653 aaPredicted RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 SEC62Q99442 399 aaKnown RBP15.89■□□□□ 0.13
PTPRE-204ENST00000455661 CARD6Q9BX69 1037 aa15.89■□□□□ 0.13
PTPRE-204ENST00000455661 DIP2AQ14689 1571 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 SALL1Q9NSC2 1324 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 YEATS4O95619 227 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 EXOSC10Q01780 885 aaKnown RBP15.88■□□□□ 0.13
PTPRE-204ENST00000455661 NEXNQ0ZGT2 675 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 TNNI3KQ59H18 835 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 MPRIPQ6WCQ1 1025 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 FCHSD1Q86WN1 690 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
PTPRE-204ENST00000455661 AMOTL2Q9Y2J4 779 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 FPGT-TNNI3KV9GXZ4 949 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 LMOD1P29536 600 aaPredicted RBP15.88■□□□□ 0.13
PTPRE-204ENST00000455661 EVCP57679 992 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 NCAPHQ15003 741 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 TRIM65Q6PJ69 517 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 RIC3Q7Z5B4 369 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 TRERF1Q96PN7 1200 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 AGXT2Q9BYV1 514 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 NCOA5Q9HCD5 579 aaKnown RBP15.88■□□□□ 0.13
PTPRE-204ENST00000455661 CARMIL3Q8ND23 1372 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 MRC1P22897 1456 aa15.88■□□□□ 0.13
PTPRE-204ENST00000455661 SPTLC2O15270 562 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 ZNF202O95125 648 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 SERPINC1P01008 464 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 PDIA3P30101 505 aaKnown RBP15.87■□□□□ 0.13
PTPRE-204ENST00000455661 UBASH3AP57075 661 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 IPO4Q8TEX9 1081 aaKnown RBP15.87■□□□□ 0.13
PTPRE-204ENST00000455661 SLC26A8Q96RN1 970 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 UTP14AQ9BVJ6 771 aaKnown RBP15.87■□□□□ 0.13
PTPRE-204ENST00000455661 ABCC6O95255 1503 aa15.87■□□□□ 0.13
PTPRE-204ENST00000455661 RAD51AP2Q09MP3 1159 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 MUM1L1Q5H9M0 696 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 C1orf141Q5JVX7 400 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 NBPF6Q5VWK0 638 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 C14orf37Q86TY3 774 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
PTPRE-204ENST00000455661 NEK11Q8NG66 645 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 IP6K1Q92551 441 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 NBPF4Q96M43 638 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 MPHOSPH8Q99549 860 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 HAUS7Q99871 368 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 POLR3EQ9NVU0 708 aa15.86■□□□□ 0.13
PTPRE-204ENST00000455661 CLIC4Q9Y696 253 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms