RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
VPS16-205ENST00000453689 RLBP1P12271 317 aa18.31■□□□□ 0.52
VPS16-205ENST00000453689 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
VPS16-205ENST00000453689 EAPPQ56P03 285 aaPredicted RBP18.31■□□□□ 0.52
VPS16-205ENST00000453689 ZBTB12Q9Y330 459 aaPredicted RBP18.31■□□□□ 0.52
VPS16-205ENST00000453689 ARAP2Q8WZ64 1704 aa18.3■□□□□ 0.52
VPS16-205ENST00000453689 PODNQ7Z5L7 613 aa18.3■□□□□ 0.52
VPS16-205ENST00000453689 PANK1Q8TE04 598 aa18.3■□□□□ 0.52
VPS16-205ENST00000453689 SUPT16HQ9Y5B9 1047 aaKnown RBP18.3■□□□□ 0.52
VPS16-205ENST00000453689 MROH5Q6ZUA9 1318 aa18.29■□□□□ 0.52
VPS16-205ENST00000453689 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
VPS16-205ENST00000453689 HSPA6P17066 643 aa18.29■□□□□ 0.52
VPS16-205ENST00000453689 PTPN12Q05209 780 aaKnown RBP18.29■□□□□ 0.52
VPS16-205ENST00000453689 C15orf52Q6ZUT6 534 aaKnown RBP18.29■□□□□ 0.52
VPS16-205ENST00000453689 PNMA8AQ86V59 439 aaPredicted RBP18.29■□□□□ 0.52
VPS16-205ENST00000453689 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
VPS16-205ENST00000453689 COA1Q9GZY4 146 aa18.29■□□□□ 0.52
VPS16-205ENST00000453689 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
VPS16-205ENST00000453689 C20orf194Q5TEA3 1177 aa18.28■□□□□ 0.52
VPS16-205ENST00000453689 CHADLQ6NUI6 762 aa18.28■□□□□ 0.52
VPS16-205ENST00000453689 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
VPS16-205ENST00000453689 CNOT7Q9UIV1 285 aaKnown RBP18.28■□□□□ 0.52
VPS16-205ENST00000453689 ZNF609O15014 1411 aa18.28■□□□□ 0.52
VPS16-205ENST00000453689 SHTN1A0MZ66 631 aa18.27■□□□□ 0.52
VPS16-205ENST00000453689 RPS12P25398 132 aaKnown RBP18.27■□□□□ 0.52
VPS16-205ENST00000453689 MVPQ14764 893 aaKnown RBP18.27■□□□□ 0.52
VPS16-205ENST00000453689 DPF2Q92785 391 aa18.27■□□□□ 0.52
VPS16-205ENST00000453689 ADARB2Q9NS39 739 aaKnown RBP18.27■□□□□ 0.52
VPS16-205ENST00000453689 CLEC11AQ9Y240 323 aa18.27■□□□□ 0.52
VPS16-205ENST00000453689 ECM29Q5VYK3 1845 aa18.27■□□□□ 0.52
VPS16-205ENST00000453689 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 EYA2O00167 538 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 GNAI2P04899 355 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 UBE4AQ14139 1066 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 USP50Q70EL3 339 aaPredicted RBP18.26■□□□□ 0.51
VPS16-205ENST00000453689 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 MICALL2Q8IY33 904 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 VGLL2Q8N8G2 317 aa18.26■□□□□ 0.51
VPS16-205ENST00000453689 MTX1Q13505 466 aa18.25■□□□□ 0.51
VPS16-205ENST00000453689 RSBN1LQ6PCB5 846 aaPredicted RBP18.25■□□□□ 0.51
VPS16-205ENST00000453689 SIL1Q9H173 461 aa18.25■□□□□ 0.51
VPS16-205ENST00000453689 CD209Q9NNX6 404 aa18.25■□□□□ 0.51
VPS16-205ENST00000453689 PA2G4Q9UQ80 394 aaKnown RBP18.25■□□□□ 0.51
VPS16-205ENST00000453689 COG6Q9Y2V7 657 aa18.25■□□□□ 0.51
VPS16-205ENST00000453689 H7C1D1 291 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 SRGAP3O43295 1099 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 PDE8BO95263 885 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 ATG9AQ7Z3C6 839 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 AGBL3Q8NEM8 1001 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 FBXO3Q9UK99 471 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 DDX19BQ9UMR2 479 aa18.24■□□□□ 0.51
VPS16-205ENST00000453689 ZBTB7BO15156 539 aaPredicted RBP18.23■□□□□ 0.51
VPS16-205ENST00000453689 CIAO1O76071 339 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 DACT2Q5SW24 774 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 STRIP1Q5VSL9 837 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 GMLQ99445 158 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 COPRSQ9NQ92 184 aa18.23■□□□□ 0.51
VPS16-205ENST00000453689 PNMA6EA0A0J9YXQ4 647 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 IL1R1P14778 569 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
VPS16-205ENST00000453689 GTF2IP78347 998 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 MAP1SQ66K74 1059 aaPredicted RBP18.22■□□□□ 0.51
VPS16-205ENST00000453689 TTLL5Q6EMB2 1281 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 SAMD7Q7Z3H4 446 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 MXD3Q9BW11 206 aa18.22■□□□□ 0.51
VPS16-205ENST00000453689 CHMP4BQ9H444 224 aaKnown RBP18.22■□□□□ 0.51
VPS16-205ENST00000453689 ITGBL1O95965 494 aaPredicted RBP18.21■□□□□ 0.51
VPS16-205ENST00000453689 EGFRP00533 1210 aa18.21■□□□□ 0.51
VPS16-205ENST00000453689 FGFR2P21802 821 aa18.21■□□□□ 0.51
VPS16-205ENST00000453689 GYG1P46976 350 aa18.21■□□□□ 0.51
VPS16-205ENST00000453689 APLP1P51693 650 aa18.21■□□□□ 0.51
VPS16-205ENST00000453689 TBC1D10BQ4KMP7 808 aaPredicted RBP18.21■□□□□ 0.51
VPS16-205ENST00000453689 FAM84BQ96KN1 310 aaPredicted RBP18.21■□□□□ 0.51
VPS16-205ENST00000453689 C1orf115Q9H7X2 142 aa18.21■□□□□ 0.51
VPS16-205ENST00000453689 HIBADHP31937 336 aaKnown RBP18.2■□□□□ 0.5
VPS16-205ENST00000453689 IL15P40933 162 aaPredicted RBP18.2■□□□□ 0.5
VPS16-205ENST00000453689 PUM3Q15397 648 aaKnown RBP18.2■□□□□ 0.5
VPS16-205ENST00000453689 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
VPS16-205ENST00000453689 MYO3BQ8WXR4 1341 aa18.2■□□□□ 0.5
VPS16-205ENST00000453689 PASKQ96RG2 1323 aa18.2■□□□□ 0.5
VPS16-205ENST00000453689 ZNF280AP59817 542 aaPredicted RBP18.19■□□□□ 0.5
VPS16-205ENST00000453689 TDRD7Q8NHU6 1098 aaKnown RBP18.19■□□□□ 0.5
VPS16-205ENST00000453689 CRBNQ96SW2 442 aa18.19■□□□□ 0.5
VPS16-205ENST00000453689 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
VPS16-205ENST00000453689 PGAP2Q9UHJ9 254 aa18.19■□□□□ 0.5
VPS16-205ENST00000453689 IFIT1P09914 478 aaKnown RBP18.18■□□□□ 0.5
VPS16-205ENST00000453689 USP17L8P0C7I0 530 aa18.18■□□□□ 0.5
VPS16-205ENST00000453689 HTRA3P83110 453 aa18.18■□□□□ 0.5
VPS16-205ENST00000453689 KIF4BQ2VIQ3 1234 aa18.18■□□□□ 0.5
VPS16-205ENST00000453689 RBM26Q5T8P6 1007 aaKnown RBP18.18■□□□□ 0.5
VPS16-205ENST00000453689 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
VPS16-205ENST00000453689 SLC5A1P13866 664 aa18.17■□□□□ 0.5
VPS16-205ENST00000453689 ATP8B2P98198 1209 aa18.17■□□□□ 0.5
VPS16-205ENST00000453689 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
VPS16-205ENST00000453689 ZC3H15Q8WU90 426 aaKnown RBP18.17■□□□□ 0.5
VPS16-205ENST00000453689 LPIN2Q92539 896 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms