RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 CCDC129Q6ZRS4 1044 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 SLC52A2Q9HAB3 445 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 PLEKHG1Q9ULL1 1385 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 MARCKSP29966 332 aaPredicted RBP19.16■□□□□ 0.66
TCOF1-206ENST00000445265 CCDC148Q8NFR7 591 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 ROBO2Q9HCK4 1378 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 CBX8Q9HC52 389 aa19.16■□□□□ 0.66
TCOF1-206ENST00000445265 NAA16Q6N069 864 aaPredicted RBP19.16■□□□□ 0.66
TCOF1-206ENST00000445265 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
TCOF1-206ENST00000445265 BMP15O95972 392 aa19.15■□□□□ 0.66
TCOF1-206ENST00000445265 KIAA1328Q86T90 577 aa19.15■□□□□ 0.66
TCOF1-206ENST00000445265 EAF2Q96CJ1 260 aaPredicted RBP19.15■□□□□ 0.66
TCOF1-206ENST00000445265 SLU7O95391 586 aaKnown RBP19.15■□□□□ 0.66
TCOF1-206ENST00000445265 TIMM10P62072 90 aa19.15■□□□□ 0.66
TCOF1-206ENST00000445265 AXDND1Q5T1B0 1012 aaPredicted RBP19.14■□□□□ 0.66
TCOF1-206ENST00000445265 ZNF287Q9HBT7 754 aa19.14■□□□□ 0.66
TCOF1-206ENST00000445265 LRRC7Q96NW7 1537 aa19.14■□□□□ 0.66
TCOF1-206ENST00000445265 KCNQ3O43525 872 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 CHAMP1Q96JM3 812 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 LMOD1P29536 600 aaPredicted RBP19.14■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC181Q5TID7 509 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 KRT222Q8N1A0 295 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 IQSEC2Q5JU85 1478 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 KRT18P05783 430 aaKnown RBP19.14■□□□□ 0.65
TCOF1-206ENST00000445265 ZNF75DP51815 510 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 RTN1Q16799 776 aa19.14■□□□□ 0.65
TCOF1-206ENST00000445265 CDC5LQ99459 802 aaKnown RBP19.14■□□□□ 0.65
TCOF1-206ENST00000445265 ABCA9Q8IUA7 1624 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 A0A1B0GUL7 405 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 NLRP5P59047 1200 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 GNG11P61952 73 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 RASEFQ8IZ41 740 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 BMP2KQ9NSY1 1161 aaPredicted RBP19.13■□□□□ 0.65
TCOF1-206ENST00000445265 NEURL1BA8MQ27 555 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 EXOC5O00471 708 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 CLEC17AQ6ZS10 378 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 TCEAL9Q9UHQ7 104 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 JAKMIP3Q5VZ66 844 aa19.13■□□□□ 0.65
TCOF1-206ENST00000445265 ZNF397Q8NF99 534 aaPredicted RBP19.13■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC191Q8NCU4 936 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 GTF3C6Q969F1 213 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 SRRTQ9BXP5 876 aaKnown RBP19.12■□□□□ 0.65
TCOF1-206ENST00000445265 TANGO6Q9C0B7 1094 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 DNAI1Q9UI46 699 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 ERICH4A6NGS2 130 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 POTEB2H3BUK9 544 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 YEATS4O95619 227 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 IFNKQ9P0W0 207 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 TPCN1Q9ULQ1 816 aa19.12■□□□□ 0.65
TCOF1-206ENST00000445265 A0A0D9SFI3 127 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC194A0A1B0GVG4 234 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 A0A1B0GVL5 298 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC102AQ96A19 550 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 NUP88Q99567 741 aaPredicted RBP19.11■□□□□ 0.65
TCOF1-206ENST00000445265 MKNK2Q9HBH9 465 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 ESR2Q92731 530 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 ZNF496Q96IT1 587 aaPredicted RBP19.11■□□□□ 0.65
TCOF1-206ENST00000445265 MAP4K1Q92918 833 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 ALKQ9UM73 1620 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 JAK2O60674 1132 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 BICDL1Q6ZP65 573 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 ORAI2Q96SN7 254 aa19.11■□□□□ 0.65
TCOF1-206ENST00000445265 INO80Q9ULG1 1556 aaPredicted RBP19.1■□□□□ 0.65
TCOF1-206ENST00000445265 KIF5BP33176 963 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 USP5P45974 858 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC43Q96MW1 224 aaKnown RBP19.1■□□□□ 0.65
TCOF1-206ENST00000445265 PPRC1Q5VV67 1664 aaKnown RBP19.1■□□□□ 0.65
TCOF1-206ENST00000445265 IL2RBP14784 551 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 IKQ13123 557 aaPredicted RBP19.1■□□□□ 0.65
TCOF1-206ENST00000445265 KLHL34Q8N239 644 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 DSCC1Q9BVC3 393 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 PDE4CQ08493 712 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 FEZ1Q99689 392 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 PCDH11XQ9BZA7 1347 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 PCDH11YQ9BZA8 1340 aa19.1■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC152Q4G0S7 254 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 APPBP2Q92624 585 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 CTAGE1Q96RT6 745 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 ELP1O95163 1332 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 DTNBO60941 627 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 MCM3P25205 808 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 C17orf53Q8N3J3 647 aaPredicted RBP19.09■□□□□ 0.65
TCOF1-206ENST00000445265 SLC4A4Q9Y6R1 1079 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 NLRP1Q9C000 1473 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 GNAT2P19087 354 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 MAP9Q49MG5 647 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 FKBP15Q5T1M5 1219 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 DZIP1Q86YF9 867 aaKnown RBP19.09■□□□□ 0.65
TCOF1-206ENST00000445265 KIF2CQ99661 725 aa19.09■□□□□ 0.65
TCOF1-206ENST00000445265 NCOA5Q9HCD5 579 aaKnown RBP19.09■□□□□ 0.65
TCOF1-206ENST00000445265 A2ML1A8K2U0 1454 aa19.08■□□□□ 0.65
TCOF1-206ENST00000445265 SPA17Q15506 151 aa19.08■□□□□ 0.65
TCOF1-206ENST00000445265 TTC6Q86TZ1 520 aa19.08■□□□□ 0.65
TCOF1-206ENST00000445265 CCDC12Q8WUD4 166 aaPredicted RBP19.08■□□□□ 0.65
TCOF1-206ENST00000445265 MYO6Q9UM54 1294 aa19.08■□□□□ 0.65
TCOF1-206ENST00000445265 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
TCOF1-206ENST00000445265 POLA2Q14181 598 aa19.08■□□□□ 0.64
TCOF1-206ENST00000445265 LIG1P18858 919 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms