RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 VPS37DQ86XT2 251 aa15.21■□□□□ 0.03
LTBR-204ENST00000444814 RBM46Q8TBY0 533 aaKnown RBP15.21■□□□□ 0.03
LTBR-204ENST00000444814 CEP126Q9P2H0 1117 aa15.21■□□□□ 0.03
LTBR-204ENST00000444814 RIPOR2Q9Y4F9 1068 aa15.21■□□□□ 0.03
LTBR-204ENST00000444814 DUOX1Q9NRD9 1551 aa15.21■□□□□ 0.03
LTBR-204ENST00000444814 TAF1P21675 1872 aa15.21■□□□□ 0.03
LTBR-204ENST00000444814 MYO3BQ8WXR4 1341 aa15.21■□□□□ 0.02
LTBR-204ENST00000444814 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 H7C1D1 291 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 KIF3CO14782 793 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 RAD17O75943 681 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 FSTL1Q12841 308 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 PUM3Q15397 648 aaKnown RBP15.2■□□□□ 0.02
LTBR-204ENST00000444814 SMC1BQ8NDV3 1235 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 COPRSQ9NQ92 184 aa15.2■□□□□ 0.02
LTBR-204ENST00000444814 USP17L3A6NCW0 530 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 USP17L4A6NCW7 530 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 ZBTB7BO15156 539 aaPredicted RBP15.19■□□□□ 0.02
LTBR-204ENST00000444814 HMMRO75330 724 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 TAF5LO75529 589 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 PDE8BO95263 885 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 SLC5A1P13866 664 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 G3BP1Q13283 466 aaKnown RBP eCLIP15.19■□□□□ 0.02
LTBR-204ENST00000444814 USP17L1Q7RTZ2 530 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 HELBQ8NG08 1087 aaPredicted RBP15.19■□□□□ 0.02
LTBR-204ENST00000444814 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 DPF2Q92785 391 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 AKAP2Q9Y2D5 859 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 EPHX2P34913 555 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 PTPN12Q05209 780 aaKnown RBP15.19■□□□□ 0.02
LTBR-204ENST00000444814 AGBL3Q8NEM8 1001 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 TNNQ9UQP3 1299 aa15.19■□□□□ 0.02
LTBR-204ENST00000444814 LTBP1Q14766 1721 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 RLBP1P12271 317 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 RFX5P48382 616 aaPredicted RBP15.18■□□□□ 0.02
LTBR-204ENST00000444814 C1QTNF8P60827 252 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
LTBR-204ENST00000444814 SLC51AQ86UW1 340 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 LDHDQ86WU2 507 aa15.18■□□□□ 0.02
LTBR-204ENST00000444814 TAF1DQ9H5J8 278 aaPredicted RBP15.18■□□□□ 0.02
LTBR-204ENST00000444814 ADARB2Q9NS39 739 aaKnown RBP15.18■□□□□ 0.02
LTBR-204ENST00000444814 PSMD14O00487 310 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 FRAT2O75474 233 aaPredicted RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 HIBADHP31937 336 aaKnown RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 GMPSP49915 693 aaPredicted RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 ATP8B2P98198 1209 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 OS9Q13438 667 aaPredicted RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 LRRC24Q50LG9 513 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 HSP90AB4PQ58FF6 505 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 STRIP1Q5VSL9 837 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 OGFOD1Q8N543 542 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 LPIN2Q92539 896 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 FBXW7Q969H0 707 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 GPR101Q96P66 508 aaPredicted RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 PUS3Q9BZE2 481 aaKnown RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 SIL1Q9H173 461 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 GNL3LQ9NVN8 582 aaKnown RBP15.17■□□□□ 0.02
LTBR-204ENST00000444814 GPRC5DQ9NZD1 345 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 CLEC11AQ9Y240 323 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 SPEF2Q9C093 1822 aa15.17■□□□□ 0.02
LTBR-204ENST00000444814 COL4A1P02462 1669 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 SCN4AP35499 1836 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 YDJCA8MPS7 323 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 VIL1P09327 827 aaKnown RBP15.16■□□□□ 0.02
LTBR-204ENST00000444814 EAPPQ56P03 285 aaPredicted RBP15.16■□□□□ 0.02
LTBR-204ENST00000444814 RPAP2Q8IXW5 612 aaPredicted RBP15.16■□□□□ 0.02
LTBR-204ENST00000444814 CD209Q9NNX6 404 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 HDAC9Q9UKV0 1011 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 COG6Q9Y2V7 657 aa15.16■□□□□ 0.02
LTBR-204ENST00000444814 TTLL5Q6EMB2 1281 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 RSBN1LQ6PCB5 846 aaPredicted RBP15.15■□□□□ 0.02
LTBR-204ENST00000444814 KLHDC4Q8TBB5 520 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 SCNN1DP51172 638 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 RRP1P56182 461 aaKnown RBP15.15■□□□□ 0.02
LTBR-204ENST00000444814 ATP2B3Q16720 1220 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 ERC1Q8IUD2 1116 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 CNOT7Q9UIV1 285 aaKnown RBP15.15■□□□□ 0.02
LTBR-204ENST00000444814 ZNF609O15014 1411 aa15.15■□□□□ 0.02
LTBR-204ENST00000444814 COL4A5P29400 1685 aa15.14■□□□□ 0.01
LTBR-204ENST00000444814 IL1R1P14778 569 aa15.14■□□□□ 0.01
LTBR-204ENST00000444814 FKBP1AP62942 108 aaKnown RBP15.14■□□□□ 0.01
LTBR-204ENST00000444814 SSH3Q8TE77 659 aa15.14■□□□□ 0.01
LTBR-204ENST00000444814 POLA2Q14181 598 aa15.13■□□□□ 0.01
LTBR-204ENST00000444814 MICALL2Q8IY33 904 aa15.13■□□□□ 0.01
LTBR-204ENST00000444814 VGLL2Q8N8G2 317 aa15.13■□□□□ 0.01
LTBR-204ENST00000444814 ZC3H15Q8WU90 426 aaKnown RBP15.13■□□□□ 0.01
LTBR-204ENST00000444814 TBC1D22AQ8WUA7 517 aa15.13■□□□□ 0.01
LTBR-204ENST00000444814 POTECB2RU33 542 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 SURF6O75683 361 aaKnown RBP15.12■□□□□ 0.01
LTBR-204ENST00000444814 SASH1O94885 1247 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 USP17L8P0C7I0 530 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 GTF2IP78347 998 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 AAMPQ13685 434 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 GORABQ5T7V8 394 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 ATG9AQ7Z3C6 839 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 ZBTB40Q9NUA8 1239 aa15.12■□□□□ 0.01
LTBR-204ENST00000444814 PA2G4Q9UQ80 394 aaKnown RBP15.12■□□□□ 0.01
LTBR-204ENST00000444814 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms