RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 RIPOR2Q9Y4F9 1068 aa29.63■■■□□ 2.33
VARS-217ENST00000440048 MICALL2Q8IY33 904 aa29.62■■■□□ 2.33
VARS-217ENST00000440048 HDAC5Q9UQL6 1122 aa29.62■■■□□ 2.33
VARS-217ENST00000440048 LRRFIP2Q9Y608 721 aaKnown RBP29.62■■■□□ 2.33
VARS-217ENST00000440048 IRS2Q9Y4H2 1338 aa29.62■■■□□ 2.33
VARS-217ENST00000440048 USP17L3A6NCW0 530 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 USP17L4A6NCW7 530 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 H7C1D1 291 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 LRRC24Q50LG9 513 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 MAP1SQ66K74 1059 aaPredicted RBP29.61■■■□□ 2.33
VARS-217ENST00000440048 C15orf52Q6ZUT6 534 aaKnown RBP29.61■■■□□ 2.33
VARS-217ENST00000440048 USP17L1Q7RTZ2 530 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 KLHDC4Q8TBB5 520 aa29.61■■■□□ 2.33
VARS-217ENST00000440048 RFX5P48382 616 aaPredicted RBP29.6■■■□□ 2.33
VARS-217ENST00000440048 HTRA3P83110 453 aa29.6■■■□□ 2.33
VARS-217ENST00000440048 RSBN1LQ6PCB5 846 aaPredicted RBP29.6■■■□□ 2.33
VARS-217ENST00000440048 ITGBL1O95965 494 aaPredicted RBP29.59■■■□□ 2.33
VARS-217ENST00000440048 GNAI3P08754 354 aa29.59■■■□□ 2.33
VARS-217ENST00000440048 CNTROBQ8N137 903 aa29.59■■■□□ 2.33
VARS-217ENST00000440048 TRPM4Q8TD43 1214 aa29.59■■■□□ 2.33
VARS-217ENST00000440048 MROH5Q6ZUA9 1318 aa29.59■■■□□ 2.33
VARS-217ENST00000440048 ZNF646O15015 1829 aaPredicted RBP29.59■■■□□ 2.33
VARS-217ENST00000440048 ZNF609O15014 1411 aa29.58■■■□□ 2.33
VARS-217ENST00000440048 PASKQ96RG2 1323 aa29.58■■■□□ 2.33
VARS-217ENST00000440048 HIRAP54198 1017 aaPredicted RBP29.57■■■□□ 2.32
VARS-217ENST00000440048 TMEM57Q8N5G2 664 aa29.57■■■□□ 2.32
VARS-217ENST00000440048 AGBL3Q8NEM8 1001 aa29.57■■■□□ 2.32
VARS-217ENST00000440048 CD209Q9NNX6 404 aa29.57■■■□□ 2.32
VARS-217ENST00000440048 PTPN12Q05209 780 aaKnown RBP29.56■■■□□ 2.32
VARS-217ENST00000440048 UBE4AQ14139 1066 aa29.56■■■□□ 2.32
VARS-217ENST00000440048 SAMD7Q7Z3H4 446 aa29.56■■■□□ 2.32
VARS-217ENST00000440048 GMLQ99445 158 aa29.56■■■□□ 2.32
VARS-217ENST00000440048 METTL24Q5JXM2 366 aa29.55■■■□□ 2.32
VARS-217ENST00000440048 DACT2Q5SW24 774 aa29.55■■■□□ 2.32
VARS-217ENST00000440048 FBXW7Q969H0 707 aa29.55■■■□□ 2.32
VARS-217ENST00000440048 CREBZFQ9NS37 354 aa29.55■■■□□ 2.32
VARS-217ENST00000440048 TBC1D10BQ4KMP7 808 aaPredicted RBP29.54■■■□□ 2.32
VARS-217ENST00000440048 STRIP1Q5VSL9 837 aa29.54■■■□□ 2.32
VARS-217ENST00000440048 JMYQ8N9B5 988 aa29.54■■■□□ 2.32
VARS-217ENST00000440048 EYA2O00167 538 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 EGFRP00533 1210 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 ZNF804AQ7Z570 1209 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 DZIP1LQ8IYY4 767 aaKnown RBP29.53■■■□□ 2.32
VARS-217ENST00000440048 VGLL2Q8N8G2 317 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 MXD3Q9BW11 206 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 PGAP2Q9UHJ9 254 aa29.53■■■□□ 2.32
VARS-217ENST00000440048 TTLL5Q6EMB2 1281 aa29.52■■■□□ 2.32
VARS-217ENST00000440048 FTSJ3Q8IY81 847 aaKnown RBP29.52■■■□□ 2.32
VARS-217ENST00000440048 ZC3H15Q8WU90 426 aaKnown RBP29.52■■■□□ 2.32
VARS-217ENST00000440048 PDE8BO95263 885 aa29.51■■■□□ 2.31
VARS-217ENST00000440048 RLBP1P12271 317 aa29.51■■■□□ 2.31
VARS-217ENST00000440048 IL1R1P14778 569 aa29.51■■■□□ 2.31
VARS-217ENST00000440048 ZNF280AP59817 542 aaPredicted RBP29.51■■■□□ 2.31
VARS-217ENST00000440048 GTF2IP78347 998 aa29.51■■■□□ 2.31
VARS-217ENST00000440048 RBM26Q5T8P6 1007 aaKnown RBP29.51■■■□□ 2.31
VARS-217ENST00000440048 PCNTO95613 3336 aa29.5■■■□□ 2.31
VARS-217ENST00000440048 GNAI2P04899 355 aa29.49■■■□□ 2.31
VARS-217ENST00000440048 USP17L8P0C7I0 530 aa29.49■■■□□ 2.31
VARS-217ENST00000440048 KIF4BQ2VIQ3 1234 aa29.49■■■□□ 2.31
VARS-217ENST00000440048 ATG9AQ7Z3C6 839 aa29.49■■■□□ 2.31
VARS-217ENST00000440048 SIL1Q9H173 461 aa29.49■■■□□ 2.31
VARS-217ENST00000440048 MYO3BQ8WXR4 1341 aa29.48■■■□□ 2.31
VARS-217ENST00000440048 POLR2AP24928 1970 aaKnown RBP29.48■■■□□ 2.31
VARS-217ENST00000440048 GYG1P46976 350 aa29.48■■■□□ 2.31
VARS-217ENST00000440048 FAM84BQ96KN1 310 aaPredicted RBP29.48■■■□□ 2.31
VARS-217ENST00000440048 FBXO3Q9UK99 471 aa29.48■■■□□ 2.31
VARS-217ENST00000440048 PA2G4Q9UQ80 394 aaKnown RBP29.48■■■□□ 2.31
VARS-217ENST00000440048 CIAO1O76071 339 aa29.47■■■□□ 2.31
VARS-217ENST00000440048 HIBADHP31937 336 aaKnown RBP29.47■■■□□ 2.31
VARS-217ENST00000440048 MTX1Q13505 466 aa29.47■■■□□ 2.31
VARS-217ENST00000440048 TMEM88BA6NKF7 163 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 TRAF5O00463 557 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 SRGAP3O43295 1099 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 FMR1Q06787 632 aaKnown RBP eCLIP29.46■■■□□ 2.311e-8■■■□□ 17.7
VARS-217ENST00000440048 ITPRIPQ8IWB1 547 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 COPRSQ9NQ92 184 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 RCAN3Q9UKA8 241 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 TRPM7Q96QT4 1865 aa29.46■■■□□ 2.31
VARS-217ENST00000440048 GLIS2Q9BZE0 524 aaPredicted RBP29.45■■■□□ 2.31
VARS-217ENST00000440048 MYOZ2Q9NPC6 264 aa29.45■■■□□ 2.31
VARS-217ENST00000440048 FGFR2P21802 821 aa29.44■■■□□ 2.3
VARS-217ENST00000440048 PUM3Q15397 648 aaKnown RBP29.44■■■□□ 2.3
VARS-217ENST00000440048 TDRD7Q8NHU6 1098 aaKnown RBP29.44■■■□□ 2.3
VARS-217ENST00000440048 FBXO33Q7Z6M2 555 aa29.43■■■□□ 2.3
VARS-217ENST00000440048 PANK1Q8TE04 598 aa29.43■■■□□ 2.3
VARS-217ENST00000440048 SASH1O94885 1247 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 IL15P40933 162 aaPredicted RBP29.42■■■□□ 2.3
VARS-217ENST00000440048 CDC37L1Q7L3B6 337 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 KIAA0825Q8IV33 1275 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 OGFOD1Q8N543 542 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 CERS5Q8N5B7 392 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 JAG2Q9Y219 1238 aa29.42■■■□□ 2.3
VARS-217ENST00000440048 ASTN2O75129 1339 aaPredicted RBP29.42■■■□□ 2.3
VARS-217ENST00000440048 ZBTB7BO15156 539 aaPredicted RBP29.41■■■□□ 2.3
VARS-217ENST00000440048 IFIT1P09914 478 aaKnown RBP29.41■■■□□ 2.3
VARS-217ENST00000440048 CAVIN4Q5BKX8 364 aa29.41■■■□□ 2.3
VARS-217ENST00000440048 VPS37DQ86XT2 251 aa29.41■■■□□ 2.3
VARS-217ENST00000440048 CEP126Q9P2H0 1117 aa29.41■■■□□ 2.3
VARS-217ENST00000440048 FAM205AQ6ZU69 1335 aa29.41■■■□□ 2.3
VARS-217ENST00000440048 MMP14P50281 582 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms