RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
HSPG2-206ENST00000439717 SCN4AP35499 1836 aa14.69□□□□□ -0.06
HSPG2-206ENST00000439717 SNAP23O00161 211 aa14.69□□□□□ -0.06
HSPG2-206ENST00000439717 KLRK1P26718 216 aa14.69□□□□□ -0.06
HSPG2-206ENST00000439717 LMOD1P29536 600 aaPredicted RBP14.69□□□□□ -0.06
HSPG2-206ENST00000439717 RRP1P56182 461 aaKnown RBP14.69□□□□□ -0.06
HSPG2-206ENST00000439717 TXNRD3Q86VQ6 643 aa14.69□□□□□ -0.06
HSPG2-206ENST00000439717 SSH3Q8TE77 659 aa14.69□□□□□ -0.06
HSPG2-206ENST00000439717 PA2G4Q9UQ80 394 aaKnown RBP14.69□□□□□ -0.06
HSPG2-206ENST00000439717 PNMA6EA0A0J9YXQ4 647 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 USP17L3A6NCW0 530 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 USP17L4A6NCW7 530 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 PSMD14O00487 310 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 VIL1P09327 827 aaKnown RBP14.68□□□□□ -0.06
HSPG2-206ENST00000439717 RPS12P25398 132 aaKnown RBP14.68□□□□□ -0.06
HSPG2-206ENST00000439717 SCNN1DP51172 638 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 POLA2Q14181 598 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 PUM3Q15397 648 aaKnown RBP14.68□□□□□ -0.06
HSPG2-206ENST00000439717 C20orf194Q5TEA3 1177 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 USP17L1Q7RTZ2 530 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 ZNF804AQ7Z570 1209 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 RBM46Q8TBY0 533 aaKnown RBP14.68□□□□□ -0.06
HSPG2-206ENST00000439717 DPF2Q92785 391 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 SIL1Q9H173 461 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 TAF1DQ9H5J8 278 aaPredicted RBP14.68□□□□□ -0.06
HSPG2-206ENST00000439717 C1orf115Q9H7X2 142 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 CD209Q9NNX6 404 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 ZBTB40Q9NUA8 1239 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 GPRC5DQ9NZD1 345 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 CEP126Q9P2H0 1117 aa14.68□□□□□ -0.06
HSPG2-206ENST00000439717 EPHX2P34913 555 aa14.67□□□□□ -0.06
HSPG2-206ENST00000439717 GMPSP49915 693 aaPredicted RBP14.67□□□□□ -0.06
HSPG2-206ENST00000439717 PNMA8AQ86V59 439 aaPredicted RBP14.67□□□□□ -0.06
HSPG2-206ENST00000439717 KCNQ5Q9NR82 932 aa14.67□□□□□ -0.06
HSPG2-206ENST00000439717 ZNF609O15014 1411 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 IFIT1P09914 478 aaKnown RBP14.66□□□□□ -0.06
HSPG2-206ENST00000439717 IL1R1P14778 569 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 FGFR2P21802 821 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
HSPG2-206ENST00000439717 C1QTNF8P60827 252 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 STRIP1Q5VSL9 837 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 CEP85Q6P2H3 762 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 RSBN1LQ6PCB5 846 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-206ENST00000439717 RPAP2Q8IXW5 612 aaPredicted RBP14.66□□□□□ -0.06
HSPG2-206ENST00000439717 LPIN2Q92539 896 aa14.66□□□□□ -0.06
HSPG2-206ENST00000439717 SLC5A1P13866 664 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 EPS15P42566 896 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 G3BP1Q13283 466 aaKnown RBP eCLIP14.65□□□□□ -0.06
HSPG2-206ENST00000439717 CAVIN4Q5BKX8 364 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 USP50Q70EL3 339 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-206ENST00000439717 FBXO33Q7Z6M2 555 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 AGBL3Q8NEM8 1001 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 FAM84BQ96KN1 310 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-206ENST00000439717 ADARB2Q9NS39 739 aaKnown RBP14.65□□□□□ -0.06
HSPG2-206ENST00000439717 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
HSPG2-206ENST00000439717 MYO3BQ8WXR4 1341 aa14.65□□□□□ -0.06
HSPG2-206ENST00000439717 PSME4Q14997 1843 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 SCN9AQ15858 1988 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 H7C1D1 291 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 FSTL1Q12841 308 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 DACT2Q5SW24 774 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 TTLL5Q6EMB2 1281 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 LDHDQ86WU2 507 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 VPS37DQ86XT2 251 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 SMC1BQ8NDV3 1235 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 CNOT7Q9UIV1 285 aaKnown RBP14.64□□□□□ -0.07
HSPG2-206ENST00000439717 AKAP2Q9Y2D5 859 aa14.64□□□□□ -0.07
HSPG2-206ENST00000439717 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
HSPG2-206ENST00000439717 SASH1O94885 1247 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 GYG1P46976 350 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 MMP14P50281 582 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 GTF2IP78347 998 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 MICALL2Q8IY33 904 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 TDRD7Q8NHU6 1098 aaKnown RBP14.63□□□□□ -0.07
HSPG2-206ENST00000439717 GMLQ99445 158 aa14.63□□□□□ -0.07
HSPG2-206ENST00000439717 HMMRO75330 724 aa14.62□□□□□ -0.07
HSPG2-206ENST00000439717 SURF6O75683 361 aaKnown RBP14.62□□□□□ -0.07
HSPG2-206ENST00000439717 FKBP1AP62942 108 aaKnown RBP14.62□□□□□ -0.07
HSPG2-206ENST00000439717 TFCP2Q12800 502 aa14.62□□□□□ -0.07
HSPG2-206ENST00000439717 EAPPQ56P03 285 aaPredicted RBP14.62□□□□□ -0.07
HSPG2-206ENST00000439717 CHADLQ6NUI6 762 aa14.62□□□□□ -0.07
HSPG2-206ENST00000439717 FBXW7Q969H0 707 aa14.62□□□□□ -0.07
HSPG2-206ENST00000439717 FAM205AQ6ZU69 1335 aa14.62□□□□□ -0.07
HSPG2-206ENST00000439717 USP17L8P0C7I0 530 aa14.61□□□□□ -0.07
HSPG2-206ENST00000439717 ZNF280AP59817 542 aaPredicted RBP14.61□□□□□ -0.07
HSPG2-206ENST00000439717 OS9Q13438 667 aaPredicted RBP14.61□□□□□ -0.07
HSPG2-206ENST00000439717 ZBTB22O15209 634 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 POTEIP0CG38 1075 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 POTEJP0CG39 1038 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 BCAMP50895 628 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 HSP90AB4PQ58FF6 505 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 GPR108Q9NPR9 543 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 GNL3LQ9NVN8 582 aaKnown RBP14.6□□□□□ -0.07
HSPG2-206ENST00000439717 CLEC11AQ9Y240 323 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 ADAMTSL1Q8N6G6 1762 aa14.6□□□□□ -0.07
HSPG2-206ENST00000439717 ZNF646O15015 1829 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-206ENST00000439717 A0A1B0GUL7 405 aa14.59□□□□□ -0.07
HSPG2-206ENST00000439717 FRAT2O75474 233 aaPredicted RBP14.59□□□□□ -0.07
HSPG2-206ENST00000439717 TIMM10P62072 90 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms