RNA–Protein interactions for RNA: ENST00000439669.5

CPNE1-217, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 784 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-217ENST00000439669 TRIM27P14373 513 aa30.12■■■□□ 2.41
CPNE1-217ENST00000439669 RSBN1LQ6PCB5 846 aaPredicted RBP30.12■■■□□ 2.41
CPNE1-217ENST00000439669 ATF7IPQ6VMQ6 1270 aa30.12■■■□□ 2.41
CPNE1-217ENST00000439669 PUS3Q9BZE2 481 aaKnown RBP30.12■■■□□ 2.41
CPNE1-217ENST00000439669 INTS3Q68E01 1043 aaKnown RBP30.11■■■□□ 2.41
CPNE1-217ENST00000439669 PSME4Q14997 1843 aa30.1■■■□□ 2.41
CPNE1-217ENST00000439669 SAMD7Q7Z3H4 446 aa30.1■■■□□ 2.41
CPNE1-217ENST00000439669 TNNQ9UQP3 1299 aa30.1■■■□□ 2.41
CPNE1-217ENST00000439669 TBC1D10BQ4KMP7 808 aaPredicted RBP30.09■■■□□ 2.41
CPNE1-217ENST00000439669 AGBL3Q8NEM8 1001 aa30.09■■■□□ 2.41
CPNE1-217ENST00000439669 CLUAP1Q96AJ1 413 aa30.09■■■□□ 2.41
CPNE1-217ENST00000439669 MEIS3Q99687 375 aa30.09■■■□□ 2.41
CPNE1-217ENST00000439669 HDAC5Q9UQL6 1122 aa30.09■■■□□ 2.41
CPNE1-217ENST00000439669 MROH5Q6ZUA9 1318 aa30.08■■■□□ 2.41
CPNE1-217ENST00000439669 HIRAP54198 1017 aaPredicted RBP30.08■■■□□ 2.41
CPNE1-217ENST00000439669 ZKSCAN2Q63HK3 967 aa30.08■■■□□ 2.41
CPNE1-217ENST00000439669 DNAJC5GQ8N7S2 189 aa30.08■■■□□ 2.41
CPNE1-217ENST00000439669 KLHDC4Q8TBB5 520 aa30.08■■■□□ 2.41
CPNE1-217ENST00000439669 ZNF609O15014 1411 aa30.07■■■□□ 2.4
CPNE1-217ENST00000439669 LRRC24Q50LG9 513 aa30.07■■■□□ 2.4
CPNE1-217ENST00000439669 RBM26Q5T8P6 1007 aaKnown RBP30.07■■■□□ 2.4
CPNE1-217ENST00000439669 C15orf52Q6ZUT6 534 aaKnown RBP30.07■■■□□ 2.4
CPNE1-217ENST00000439669 CREBZFQ9NS37 354 aa30.07■■■□□ 2.4
CPNE1-217ENST00000439669 RIPOR2Q9Y4F9 1068 aa30.07■■■□□ 2.4
CPNE1-217ENST00000439669 LRRFIP2Q9Y608 721 aaKnown RBP30.07■■■□□ 2.4
CPNE1-217ENST00000439669 IRS2Q9Y4H2 1338 aa30.06■■■□□ 2.4
CPNE1-217ENST00000439669 ZNF804AQ7Z570 1209 aa30.06■■■□□ 2.4
CPNE1-217ENST00000439669 CD209Q9NNX6 404 aa30.06■■■□□ 2.4
CPNE1-217ENST00000439669 KIF4BQ2VIQ3 1234 aa30.05■■■□□ 2.4
CPNE1-217ENST00000439669 METTL24Q5JXM2 366 aa30.05■■■□□ 2.4
CPNE1-217ENST00000439669 STRIP1Q5VSL9 837 aa30.05■■■□□ 2.4
CPNE1-217ENST00000439669 ZC3H15Q8WU90 426 aaKnown RBP30.05■■■□□ 2.4
CPNE1-217ENST00000439669 KLRG1Q96E93 195 aa30.05■■■□□ 2.4
CPNE1-217ENST00000439669 EGFRP00533 1210 aa30.04■■■□□ 2.4
CPNE1-217ENST00000439669 UBE4AQ14139 1066 aa30.04■■■□□ 2.4
CPNE1-217ENST00000439669 DACT2Q5SW24 774 aa30.04■■■□□ 2.4
CPNE1-217ENST00000439669 MXD3Q9BW11 206 aa30.04■■■□□ 2.4
CPNE1-217ENST00000439669 TMEM88BA6NKF7 163 aa30.03■■■□□ 2.4
CPNE1-217ENST00000439669 GNAI3P08754 354 aa30.03■■■□□ 2.4
CPNE1-217ENST00000439669 USP17L8P0C7I0 530 aa30.03■■■□□ 2.4
CPNE1-217ENST00000439669 TTLL5Q6EMB2 1281 aa30.03■■■□□ 2.4
CPNE1-217ENST00000439669 GMLQ99445 158 aa30.03■■■□□ 2.4
CPNE1-217ENST00000439669 MYO3BQ8WXR4 1341 aa30.02■■■□□ 2.4
CPNE1-217ENST00000439669 TRAF5O00463 557 aa30.02■■■□□ 2.4
CPNE1-217ENST00000439669 RFX5P48382 616 aaPredicted RBP30.02■■■□□ 2.4
CPNE1-217ENST00000439669 GTF2IP78347 998 aa30.02■■■□□ 2.4
CPNE1-217ENST00000439669 PGAP2Q9UHJ9 254 aa30.02■■■□□ 2.4
CPNE1-217ENST00000439669 CEP350Q5VT06 3117 aa30.01■■■□□ 2.4
CPNE1-217ENST00000439669 ZNF280AP59817 542 aaPredicted RBP30.01■■■□□ 2.39
CPNE1-217ENST00000439669 FMR1Q06787 632 aaKnown RBP eCLIP30.01■■■□□ 2.397e-7■■■□□ 18.6
CPNE1-217ENST00000439669 GLIS2Q9BZE0 524 aaPredicted RBP30.01■■■□□ 2.39
CPNE1-217ENST00000439669 FTSJ3Q8IY81 847 aaKnown RBP30■■■□□ 2.39
CPNE1-217ENST00000439669 TMEM57Q8N5G2 664 aa30■■■□□ 2.39
CPNE1-217ENST00000439669 ZNF646O15015 1829 aaPredicted RBP29.99■■■□□ 2.39
CPNE1-217ENST00000439669 EYA2O00167 538 aa29.99■■■□□ 2.39
CPNE1-217ENST00000439669 PTPN12Q05209 780 aaKnown RBP29.99■■■□□ 2.39
CPNE1-217ENST00000439669 IL1R1P14778 569 aa29.98■■■□□ 2.39
CPNE1-217ENST00000439669 CDC37L1Q7L3B6 337 aa29.98■■■□□ 2.39
CPNE1-217ENST00000439669 MYOZ2Q9NPC6 264 aa29.98■■■□□ 2.39
CPNE1-217ENST00000439669 MKRN1Q9UHC7 482 aaKnown RBP29.98■■■□□ 2.39
CPNE1-217ENST00000439669 PDE8BO95263 885 aa29.97■■■□□ 2.39
CPNE1-217ENST00000439669 GYG1P46976 350 aa29.97■■■□□ 2.39
CPNE1-217ENST00000439669 OGFOD1Q8N543 542 aa29.97■■■□□ 2.39
CPNE1-217ENST00000439669 VGLL2Q8N8G2 317 aa29.97■■■□□ 2.39
CPNE1-217ENST00000439669 SIL1Q9H173 461 aa29.97■■■□□ 2.39
CPNE1-217ENST00000439669 DCPSQ96C86 337 aaKnown RBP29.96■■■□□ 2.39
CPNE1-217ENST00000439669 HIBADHP31937 336 aaKnown RBP29.95■■■□□ 2.39
CPNE1-217ENST00000439669 USP48Q86UV5 1035 aa29.95■■■□□ 2.39
CPNE1-217ENST00000439669 KIAA0825Q8IV33 1275 aa29.95■■■□□ 2.39
CPNE1-217ENST00000439669 DZIP1LQ8IYY4 767 aaKnown RBP29.95■■■□□ 2.39
CPNE1-217ENST00000439669 GGA3Q9NZ52 723 aa29.95■■■□□ 2.39
CPNE1-217ENST00000439669 ABT1Q9ULW3 272 aaKnown RBP29.95■■■□□ 2.39
CPNE1-217ENST00000439669 JAG2Q9Y219 1238 aa29.95■■■□□ 2.39
CPNE1-217ENST00000439669 GNAI2P04899 355 aa29.94■■■□□ 2.38
CPNE1-217ENST00000439669 KRT26Q7Z3Y9 468 aa29.94■■■□□ 2.38
CPNE1-217ENST00000439669 VPS37DQ86XT2 251 aa29.94■■■□□ 2.38
CPNE1-217ENST00000439669 FAM84BQ96KN1 310 aaPredicted RBP29.94■■■□□ 2.38
CPNE1-217ENST00000439669 ASTN2O75129 1339 aaPredicted RBP29.94■■■□□ 2.38
CPNE1-217ENST00000439669 SCARF1Q14162 830 aa29.93■■■□□ 2.38
CPNE1-217ENST00000439669 PUM3Q15397 648 aaKnown RBP29.93■■■□□ 2.38
CPNE1-217ENST00000439669 ZNF408Q9H9D4 720 aa29.93■■■□□ 2.38
CPNE1-217ENST00000439669 FBXO3Q9UK99 471 aa29.93■■■□□ 2.38
CPNE1-217ENST00000439669 HDAC9Q9UKV0 1011 aa29.93■■■□□ 2.38
CPNE1-217ENST00000439669 PA2G4Q9UQ80 394 aaKnown RBP29.93■■■□□ 2.38
CPNE1-217ENST00000439669 TRPM7Q96QT4 1865 aa29.93■■■□□ 2.38
CPNE1-217ENST00000439669 SRGAP3O43295 1099 aa29.92■■■□□ 2.38
CPNE1-217ENST00000439669 CIAO1O76071 339 aa29.92■■■□□ 2.38
CPNE1-217ENST00000439669 CELF2O95319 508 aaKnown RBP29.92■■■□□ 2.38
CPNE1-217ENST00000439669 CAVIN4Q5BKX8 364 aa29.92■■■□□ 2.38
CPNE1-217ENST00000439669 ATG9AQ7Z3C6 839 aa29.92■■■□□ 2.38
CPNE1-217ENST00000439669 ITPRIPQ8IWB1 547 aa29.92■■■□□ 2.38
CPNE1-217ENST00000439669 CNTNAP1P78357 1384 aa29.91■■■□□ 2.38
CPNE1-217ENST00000439669 IFIT1P09914 478 aaKnown RBP29.91■■■□□ 2.38
CPNE1-217ENST00000439669 TDRD7Q8NHU6 1098 aaKnown RBP29.91■■■□□ 2.38
CPNE1-217ENST00000439669 ADM5C9JUS6 153 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 RLBP1P12271 317 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 ANGEL2Q5VTE6 544 aaKnown RBP29.9■■■□□ 2.38
CPNE1-217ENST00000439669 CST9Q5W186 159 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 SULF1Q8IWU6 871 aa29.9■■■□□ 2.38
CPNE1-217ENST00000439669 CERS5Q8N5B7 392 aa29.9■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms