RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 HHIPL1Q96JK4 782 aa23.42■■□□□ 1.34
AC004540.1-201ENST00000439120 GGA3Q9NZ52 723 aa23.42■■□□□ 1.34
AC004540.1-201ENST00000439120 WTIPA6NIX2 430 aaPredicted RBP23.41■■□□□ 1.34
AC004540.1-201ENST00000439120 USP17L8P0C7I0 530 aa23.41■■□□□ 1.34
AC004540.1-201ENST00000439120 IFIT5Q13325 482 aaKnown RBP23.41■■□□□ 1.34
AC004540.1-201ENST00000439120 SLC4A10Q6U841 1118 aa23.41■■□□□ 1.34
AC004540.1-201ENST00000439120 COA1Q9GZY4 146 aa23.41■■□□□ 1.34
AC004540.1-201ENST00000439120 ZNF804BA4D1E1 1349 aa23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 ADM5C9JUS6 153 aa23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 LBX1P52954 281 aa23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 ZNF280AP59817 542 aaPredicted RBP23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 C9orf78Q9NZ63 289 aaPredicted RBP23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 POLR2AP24928 1970 aaKnown RBP23.4■■□□□ 1.34
AC004540.1-201ENST00000439120 GRM8O00222 908 aa23.39■■□□□ 1.33
AC004540.1-201ENST00000439120 MAP2K2P36507 400 aa23.39■■□□□ 1.33
AC004540.1-201ENST00000439120 HUNKP57058 714 aa23.39■■□□□ 1.33
AC004540.1-201ENST00000439120 AOC2O75106 756 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 FOXO4P98177 505 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 CHRNDQ07001 517 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 SCARF1Q14162 830 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 TAF7LQ5H9L4 462 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 DLK2Q6UY11 383 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 OGFOD1Q8N543 542 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 C2orf69Q8N8R5 385 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 MYOZ2Q9NPC6 264 aa23.38■■□□□ 1.33
AC004540.1-201ENST00000439120 MYO3BQ8WXR4 1341 aa23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 CCDC57Q2TAC2 916 aa23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 ANGEL2Q5VTE6 544 aaKnown RBP23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 GMLQ99445 158 aa23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 SRCIN1Q9C0H9 1055 aa23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 GBA2Q9HCG7 927 aaPredicted RBP23.37■■□□□ 1.33
AC004540.1-201ENST00000439120 ZNF521Q96K83 1311 aa23.36■■□□□ 1.33
AC004540.1-201ENST00000439120 ALDH1L1O75891 902 aa23.36■■□□□ 1.33
AC004540.1-201ENST00000439120 HSPA8P11142 646 aaKnown RBP23.36■■□□□ 1.33
AC004540.1-201ENST00000439120 STRIP1Q5VSL9 837 aa23.36■■□□□ 1.33
AC004540.1-201ENST00000439120 LMBR1LQ6UX01 489 aa23.36■■□□□ 1.33
AC004540.1-201ENST00000439120 ASTN2O75129 1339 aaPredicted RBP23.35■■□□□ 1.33
AC004540.1-201ENST00000439120 DACT2Q5SW24 774 aa23.35■■□□□ 1.33
AC004540.1-201ENST00000439120 TXNRD3Q86VQ6 643 aa23.35■■□□□ 1.33
AC004540.1-201ENST00000439120 E9PSI1 815 aa23.34■■□□□ 1.33
AC004540.1-201ENST00000439120 KLRK1P26718 216 aa23.34■■□□□ 1.33
AC004540.1-201ENST00000439120 NOGQ13253 232 aa23.33■■□□□ 1.33
AC004540.1-201ENST00000439120 TTLL5Q6EMB2 1281 aa23.33■■□□□ 1.33
AC004540.1-201ENST00000439120 CDCA5Q96FF9 252 aa23.33■■□□□ 1.33
AC004540.1-201ENST00000439120 MXD3Q9BW11 206 aa23.33■■□□□ 1.33
AC004540.1-201ENST00000439120 TAF5LO75529 589 aa23.32■■□□□ 1.32
AC004540.1-201ENST00000439120 HELBQ8NG08 1087 aaPredicted RBP23.32■■□□□ 1.32
AC004540.1-201ENST00000439120 CNNM1Q9NRU3 951 aa23.32■■□□□ 1.32
AC004540.1-201ENST00000439120 PITPNM2Q9BZ72 1349 aa23.32■■□□□ 1.32
AC004540.1-201ENST00000439120 CA12O43570 354 aa23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 BRPF1P55201 1214 aaPredicted RBP23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 GTF2IP78347 998 aa23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 RGMBQ6NW40 437 aa23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 LDHAL6AQ6ZMR3 332 aa23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 HDAC9Q9UKV0 1011 aa23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 ZNF646O15015 1829 aaPredicted RBP23.31■■□□□ 1.32
AC004540.1-201ENST00000439120 A0A1B0GUL6 1792 aa23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 PLIN1O60240 522 aa23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 MMP14P50281 582 aa23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 EPHA10Q5JZY3 1008 aa23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 ZNF804AQ7Z570 1209 aa23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 ZNF594Q96JF6 807 aaPredicted RBP23.3■■□□□ 1.32
AC004540.1-201ENST00000439120 ZNF157P51786 506 aaPredicted RBP23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 NBPF9Q3BBW0 867 aa23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 KIAA0825Q8IV33 1275 aa23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 MRPL50Q8N5N7 158 aaKnown RBP23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 CCDC102AQ96A19 550 aa23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 CD209Q9NNX6 404 aa23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 PTPRCP08575 1304 aa23.29■■□□□ 1.32
AC004540.1-201ENST00000439120 SNAP23O00161 211 aa23.28■■□□□ 1.32
AC004540.1-201ENST00000439120 TSKSQ9UJT2 592 aa23.28■■□□□ 1.32
AC004540.1-201ENST00000439120 C15orf52Q6ZUT6 534 aaKnown RBP23.27■■□□□ 1.32
AC004540.1-201ENST00000439120 SUCLG2Q96I99 432 aa23.27■■□□□ 1.32
AC004540.1-201ENST00000439120 WNT10BO00744 389 aa23.26■■□□□ 1.31
AC004540.1-201ENST00000439120 SASH1O94885 1247 aa23.26■■□□□ 1.31
AC004540.1-201ENST00000439120 FKBP1BP68106 108 aa23.26■■□□□ 1.31
AC004540.1-201ENST00000439120 SLFN5Q08AF3 891 aa23.26■■□□□ 1.31
AC004540.1-201ENST00000439120 SCAF8Q9UPN6 1271 aaKnown RBP23.26■■□□□ 1.31
AC004540.1-201ENST00000439120 NBPF7P0C2Y1 421 aaPredicted RBP23.25■■□□□ 1.31
AC004540.1-201ENST00000439120 SSH1Q8WYL5 1049 aa23.25■■□□□ 1.31
AC004540.1-201ENST00000439120 PAPPA2Q9BXP8 1791 aa23.24■■□□□ 1.31
AC004540.1-201ENST00000439120 NF2P35240 595 aa23.24■■□□□ 1.31
AC004540.1-201ENST00000439120 FAM155AB1AL88 458 aaPredicted RBP23.23■■□□□ 1.31
AC004540.1-201ENST00000439120 TTLL12Q14166 644 aaPredicted RBP23.23■■□□□ 1.31
AC004540.1-201ENST00000439120 BICC1Q9H694 974 aaKnown RBP23.23■■□□□ 1.31
AC004540.1-201ENST00000439120 UTYO14607 1347 aa23.23■■□□□ 1.31
AC004540.1-201ENST00000439120 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
AC004540.1-201ENST00000439120 IL1R1P14778 569 aa23.22■■□□□ 1.31
AC004540.1-201ENST00000439120 DLGAP5Q15398 846 aa23.22■■□□□ 1.31
AC004540.1-201ENST00000439120 APOBEC3FQ8IUX4 373 aaKnown RBP23.22■■□□□ 1.31
AC004540.1-201ENST00000439120 ZIC5Q96T25 663 aa23.22■■□□□ 1.31
AC004540.1-201ENST00000439120 SMC4Q9NTJ3 1288 aa23.22■■□□□ 1.31
AC004540.1-201ENST00000439120 SLC10A3P09131 477 aa23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 KIF23Q02241 960 aaPredicted RBP23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 ALDH1L2Q3SY69 923 aa23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 PRAMEF18Q5VWM3 479 aa23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 CDCA7LQ96GN5 454 aa23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 KAZALD1Q96I82 304 aa23.21■■□□□ 1.31
AC004540.1-201ENST00000439120 F8W031 263 aaPredicted RBP23.2■■□□□ 1.3
AC004540.1-201ENST00000439120 UBE4AQ14139 1066 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms