RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 TXNRD3Q86VQ6 643 aa30.98■■■□□ 2.55
RAPGEF1-206ENST00000438647 PLIN1O60240 522 aa30.97■■■□□ 2.55
RAPGEF1-206ENST00000438647 ZKSCAN2Q63HK3 967 aa30.97■■■□□ 2.55
RAPGEF1-206ENST00000438647 ZC3H15Q8WU90 426 aaKnown RBP30.97■■■□□ 2.55
RAPGEF1-206ENST00000438647 MROH5Q6ZUA9 1318 aa30.97■■■□□ 2.55
RAPGEF1-206ENST00000438647 PSME4Q14997 1843 aa30.96■■■□□ 2.55
RAPGEF1-206ENST00000438647 KLRK1P26718 216 aa30.96■■■□□ 2.55
RAPGEF1-206ENST00000438647 HTRA3P83110 453 aa30.96■■■□□ 2.55
RAPGEF1-206ENST00000438647 A0A1B0GUL6 1792 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 GNAI3P08754 354 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 STRIP1Q5VSL9 837 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 TRPM4Q8TD43 1214 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 PUS3Q9BZE2 481 aaKnown RBP30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 CREBZFQ9NS37 354 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 RIPOR2Q9Y4F9 1068 aa30.95■■■□□ 2.55
RAPGEF1-206ENST00000438647 SHTN1A0MZ66 631 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 SNAP23O00161 211 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 UBE4AQ14139 1066 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 ZNF804AQ7Z570 1209 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 DNAJC5GQ8N7S2 189 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 MEIS3Q99687 375 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 MYO3BQ8WXR4 1341 aa30.94■■■□□ 2.54
RAPGEF1-206ENST00000438647 FBXW7Q969H0 707 aa30.93■■■□□ 2.54
RAPGEF1-206ENST00000438647 PGAP2Q9UHJ9 254 aa30.93■■■□□ 2.54
RAPGEF1-206ENST00000438647 IRS2Q9Y4H2 1338 aa30.93■■■□□ 2.54
RAPGEF1-206ENST00000438647 HIRAP54198 1017 aaPredicted RBP30.92■■■□□ 2.54
RAPGEF1-206ENST00000438647 SAMD7Q7Z3H4 446 aa30.92■■■□□ 2.54
RAPGEF1-206ENST00000438647 CD209Q9NNX6 404 aa30.92■■■□□ 2.54
RAPGEF1-206ENST00000438647 LRRFIP2Q9Y608 721 aaKnown RBP30.92■■■□□ 2.54
RAPGEF1-206ENST00000438647 TBC1D10BQ4KMP7 808 aaPredicted RBP30.91■■■□□ 2.54
RAPGEF1-206ENST00000438647 METTL24Q5JXM2 366 aa30.91■■■□□ 2.54
RAPGEF1-206ENST00000438647 DACT2Q5SW24 774 aa30.91■■■□□ 2.54
RAPGEF1-206ENST00000438647 CLUAP1Q96AJ1 413 aa30.91■■■□□ 2.54
RAPGEF1-206ENST00000438647 GMLQ99445 158 aa30.91■■■□□ 2.54
RAPGEF1-206ENST00000438647 TMEM88BA6NKF7 163 aa30.9■■■□□ 2.54
RAPGEF1-206ENST00000438647 USP17L8P0C7I0 530 aa30.9■■■□□ 2.54
RAPGEF1-206ENST00000438647 LRRC24Q50LG9 513 aa30.9■■■□□ 2.54
RAPGEF1-206ENST00000438647 TTLL5Q6EMB2 1281 aa30.9■■■□□ 2.54
RAPGEF1-206ENST00000438647 KLRG1Q96E93 195 aa30.9■■■□□ 2.54
RAPGEF1-206ENST00000438647 ZNF280AP59817 542 aaPredicted RBP30.89■■■□□ 2.54
RAPGEF1-206ENST00000438647 KIF4BQ2VIQ3 1234 aa30.89■■■□□ 2.54
RAPGEF1-206ENST00000438647 KLHDC4Q8TBB5 520 aa30.89■■■□□ 2.54
RAPGEF1-206ENST00000438647 RFX5P48382 616 aaPredicted RBP30.88■■■□□ 2.53
RAPGEF1-206ENST00000438647 RBM26Q5T8P6 1007 aaKnown RBP30.88■■■□□ 2.53
RAPGEF1-206ENST00000438647 FTSJ3Q8IY81 847 aaKnown RBP30.88■■■□□ 2.53
RAPGEF1-206ENST00000438647 FBXO3Q9UK99 471 aa30.88■■■□□ 2.53
RAPGEF1-206ENST00000438647 IL1R1P14778 569 aa30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 MMP14P50281 582 aa30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 GTF2IP78347 998 aa30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 PTPN12Q05209 780 aaKnown RBP30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 OGFOD1Q8N543 542 aa30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 TNNQ9UQP3 1299 aa30.87■■■□□ 2.53
RAPGEF1-206ENST00000438647 EYA2O00167 538 aa30.86■■■□□ 2.53
RAPGEF1-206ENST00000438647 PDE8BO95263 885 aa30.86■■■□□ 2.53
RAPGEF1-206ENST00000438647 CDC37L1Q7L3B6 337 aa30.86■■■□□ 2.53
RAPGEF1-206ENST00000438647 EGFRP00533 1210 aa30.85■■■□□ 2.53
RAPGEF1-206ENST00000438647 TMEM57Q8N5G2 664 aa30.85■■■□□ 2.53
RAPGEF1-206ENST00000438647 VGLL2Q8N8G2 317 aa30.84■■■□□ 2.53
RAPGEF1-206ENST00000438647 MYOZ2Q9NPC6 264 aa30.84■■■□□ 2.53
RAPGEF1-206ENST00000438647 GNAI2P04899 355 aa30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 HIBADHP31937 336 aaKnown RBP30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 DZIP1LQ8IYY4 767 aaKnown RBP30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 DCPSQ96C86 337 aaKnown RBP30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 MXD3Q9BW11 206 aa30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 GLIS2Q9BZE0 524 aaPredicted RBP30.83■■■□□ 2.53
RAPGEF1-206ENST00000438647 TRAF5O00463 557 aa30.82■■■□□ 2.52
RAPGEF1-206ENST00000438647 CIAO1O76071 339 aa30.82■■■□□ 2.52
RAPGEF1-206ENST00000438647 PUM3Q15397 648 aaKnown RBP30.82■■■□□ 2.52
RAPGEF1-206ENST00000438647 HDAC9Q9UKV0 1011 aa30.82■■■□□ 2.52
RAPGEF1-206ENST00000438647 CAVIN4Q5BKX8 364 aa30.81■■■□□ 2.52
RAPGEF1-206ENST00000438647 VPS37DQ86XT2 251 aa30.81■■■□□ 2.52
RAPGEF1-206ENST00000438647 FAM84BQ96KN1 310 aaPredicted RBP30.81■■■□□ 2.52
RAPGEF1-206ENST00000438647 ZNF646O15015 1829 aaPredicted RBP30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 SASH1O94885 1247 aa30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 GYG1P46976 350 aa30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 FKBP1AP62942 108 aaKnown RBP30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 MTX1Q13505 466 aa30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 SIL1Q9H173 461 aa30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 COPRSQ9NQ92 184 aa30.8■■■□□ 2.52
RAPGEF1-206ENST00000438647 SRGAP3O43295 1099 aa30.79■■■□□ 2.52
RAPGEF1-206ENST00000438647 IFIT1P09914 478 aaKnown RBP30.79■■■□□ 2.52
RAPGEF1-206ENST00000438647 KRT26Q7Z3Y9 468 aa30.79■■■□□ 2.52
RAPGEF1-206ENST00000438647 GGA3Q9NZ52 723 aa30.79■■■□□ 2.52
RAPGEF1-206ENST00000438647 IL15P40933 162 aaPredicted RBP30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 SCARF1Q14162 830 aa30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 ATG9AQ7Z3C6 839 aa30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 KIAA0825Q8IV33 1275 aa30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 JMYQ8N9B5 988 aa30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 TDRD7Q8NHU6 1098 aaKnown RBP30.78■■■□□ 2.52
RAPGEF1-206ENST00000438647 FMR1Q06787 632 aaKnown RBP eCLIP30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 USP48Q86UV5 1035 aa30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 ITPRIPQ8IWB1 547 aa30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 SULF1Q8IWU6 871 aa30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 CEP126Q9P2H0 1117 aa30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 MKRN1Q9UHC7 482 aaKnown RBP30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 ABT1Q9ULW3 272 aaKnown RBP30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 CNTNAP1P78357 1384 aa30.77■■■□□ 2.52
RAPGEF1-206ENST00000438647 FAM205AQ6ZU69 1335 aa30.76■■■□□ 2.52
RAPGEF1-206ENST00000438647 TRPM7Q96QT4 1865 aa30.76■■■□□ 2.52
RAPGEF1-206ENST00000438647 CELF2O95319 508 aaKnown RBP30.76■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms