RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 SGPL1O95470 568 aa15.23■□□□□ 0.03
RTN4-211ENST00000438462 NBPF10Q6P3W6 841 aaKnown RBP15.23■□□□□ 0.03
RTN4-211ENST00000438462 ADAMTS19Q8TE59 1207 aa15.23■□□□□ 0.03
RTN4-211ENST00000438462 GNRH1P01148 92 aa15.22■□□□□ 0.03
RTN4-211ENST00000438462 TEFQ10587 303 aa15.22■□□□□ 0.03
RTN4-211ENST00000438462 MTHFSDQ2M296 383 aaKnown RBP15.22■□□□□ 0.03
RTN4-211ENST00000438462 RSBN1LQ6PCB5 846 aaPredicted RBP15.22■□□□□ 0.03
RTN4-211ENST00000438462 USP38Q8NB14 1042 aa15.22■□□□□ 0.03
RTN4-211ENST00000438462 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
RTN4-211ENST00000438462 PAWRQ96IZ0 340 aaKnown RBP15.22■□□□□ 0.03
RTN4-211ENST00000438462 UNC93B1Q9H1C4 597 aa15.22■□□□□ 0.03
RTN4-211ENST00000438462 BIN2Q9UBW5 565 aaPredicted RBP15.22■□□□□ 0.03
RTN4-211ENST00000438462 KCNQ3O43525 872 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 SLC24A1O60721 1099 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 USP17L8P0C7I0 530 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 UBXN2AP68543 259 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 RAET1EQ8TD07 263 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 DIS3LQ8TF46 1054 aaKnown RBP15.21■□□□□ 0.03
RTN4-211ENST00000438462 NECTIN2Q92692 538 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 OTOFQ9HC10 1997 aa15.21■□□□□ 0.03
RTN4-211ENST00000438462 C6orf229H3BNL8 230 aa15.2■□□□□ 0.02
RTN4-211ENST00000438462 UHRF1Q96T88 793 aaPredicted RBP15.2■□□□□ 0.02
RTN4-211ENST00000438462 FAM205AQ6ZU69 1335 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 TFRCP02786 760 aaKnown RBP15.19■□□□□ 0.02
RTN4-211ENST00000438462 MRE11P49959 708 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 GRAPQ13588 217 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 MAP3K11Q16584 847 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 GRAPLQ8TC17 118 aaPredicted RBP15.19■□□□□ 0.02
RTN4-211ENST00000438462 TRIM47Q96LD4 638 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 LRFN3Q9BTN0 628 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 SEMA6BQ9H3T3 888 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 POLLQ9UGP5 575 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 SRRDQ9UH36 339 aa15.19■□□□□ 0.02
RTN4-211ENST00000438462 NECAB2Q7Z6G3 386 aa15.18■□□□□ 0.02
RTN4-211ENST00000438462 GMLQ99445 158 aa15.18■□□□□ 0.02
RTN4-211ENST00000438462 NSFL1CQ9UNZ2 370 aaKnown RBP15.18■□□□□ 0.02
RTN4-211ENST00000438462 CTGFP29279 349 aa15.17■□□□□ 0.02
RTN4-211ENST00000438462 EYA3Q99504 573 aa15.17■□□□□ 0.02
RTN4-211ENST00000438462 MUC6Q6W4X9 2439 aa15.17■□□□□ 0.02
RTN4-211ENST00000438462 COL1A1P02452 1464 aaPredicted RBP15.16■□□□□ 0.02
RTN4-211ENST00000438462 WNT10BO00744 389 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
RTN4-211ENST00000438462 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 FAM43AQ8N2R8 423 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 BRI3BPQ8WY22 251 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 SIN3AQ96ST3 1273 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
RTN4-211ENST00000438462 MAP3K15Q6ZN16 1313 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 MYPNQ86TC9 1320 aa15.16■□□□□ 0.02
RTN4-211ENST00000438462 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 SASH1O94885 1247 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 OSBPP22059 807 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 MDM2Q00987 491 aaPredicted RBP15.15■□□□□ 0.02
RTN4-211ENST00000438462 APOBEC3FQ8IUX4 373 aaKnown RBP15.15■□□□□ 0.02
RTN4-211ENST00000438462 MS4A4AQ96JQ5 239 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 TTYH1Q9H313 450 aaPredicted RBP15.15■□□□□ 0.02
RTN4-211ENST00000438462 BDP1A6H8Y1 2624 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 COL4A1P02462 1669 aa15.15■□□□□ 0.02
RTN4-211ENST00000438462 TLR2O60603 784 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 IL13P35225 146 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 GPSM2P81274 684 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 TMC4Q7Z404 712 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 PPP1R42Q7Z4L9 355 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 NGEFQ8N5V2 710 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 IL17REQ8NFR9 667 aa15.14■□□□□ 0.01
RTN4-211ENST00000438462 CCL15-CCL14A0A0B4J2E2 113 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 HMOX1P09601 288 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 SNRPA1P09661 255 aaKnown RBP15.13■□□□□ 0.01
RTN4-211ENST00000438462 PSMC4P43686 418 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 CCL15Q16663 113 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 OPTNQ96CV9 577 aa15.13■□□□□ 0.01
RTN4-211ENST00000438462 G3V3G9 751 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 PPP1R12BO60237 982 aaPredicted RBP15.12■□□□□ 0.01
RTN4-211ENST00000438462 SLC10A5Q5PT55 438 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 DCAF8Q5TAQ9 597 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 ATXN2LQ8WWM7 1075 aaKnown RBP15.12■□□□□ 0.01
RTN4-211ENST00000438462 ASB2Q96Q27 587 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 ZBTB3Q9H5J0 574 aa15.12■□□□□ 0.01
RTN4-211ENST00000438462 UNCXA6NJT0 531 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 CAPN2P17655 700 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 HOXD10P28358 340 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 NEUROD1Q13562 356 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 KIF6Q6ZMV9 814 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 SLAIN1Q8ND83 568 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 TBC1D16Q8TBP0 767 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 CRISPLD2Q9H0B8 497 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 NCOR1O75376 2440 aa15.11■□□□□ 0.01
RTN4-211ENST00000438462 TTLL7Q6ZT98 887 aa15.1■□□□□ 0.01
RTN4-211ENST00000438462 ZC3H12CQ9C0D7 883 aaKnown RBP15.1■□□□□ 0.01
RTN4-211ENST00000438462 ELP3Q9H9T3 547 aa15.1■□□□□ 0.01
RTN4-211ENST00000438462 ADGRA2Q96PE1 1338 aa15.1■□□□□ 0.01
RTN4-211ENST00000438462 WDHD1O75717 1129 aaPredicted RBP15.09■□□□□ 0.01
RTN4-211ENST00000438462 FMNL1O95466 1100 aaPredicted RBP15.09■□□□□ 0.01
RTN4-211ENST00000438462 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
RTN4-211ENST00000438462 PRKCZQ05513 592 aa15.09■□□□□ 0.01
RTN4-211ENST00000438462 NECAB3Q96P71 396 aaPredicted RBP15.09■□□□□ 0.01
RTN4-211ENST00000438462 PAK6Q9NQU5 681 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms