RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 DHX32Q7L7V1 743 aaKnown RBP12.27□□□□□ -0.44
CLSTN1-203ENST00000435891 OSBP2Q969R2 916 aa12.27□□□□□ -0.44
CLSTN1-203ENST00000435891 CCDC94Q9BW85 323 aaPredicted RBP12.27□□□□□ -0.44
CLSTN1-203ENST00000435891 NUP188Q5SRE5 1749 aa12.27□□□□□ -0.44
CLSTN1-203ENST00000435891 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 FAM177BA6PVY3 158 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 E7EWF7 191 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 H3BQV1 296 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 TERF1P54274 439 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 SCARF1Q14162 830 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 IFFO2Q5TF58 517 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 CCDC191Q8NCU4 936 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 SMARCC2Q8TAQ2 1214 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 PIBF1Q8WXW3 757 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 PFKFB2O60825 505 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 ADD1P35611 737 aaKnown RBP12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 EXOSC10Q01780 885 aaKnown RBP12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 FKBP4Q02790 459 aaKnown RBP eCLIP12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 NOLC1Q14978 699 aaKnown RBP eCLIP12.27□□□□□ -0.451e-6■■□□□ 12
CLSTN1-203ENST00000435891 ANO6Q4KMQ2 910 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 PI16Q6UXB8 463 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 STRN4Q9NRL3 753 aa12.27□□□□□ -0.45
CLSTN1-203ENST00000435891 ZBTB22O15209 634 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 FOXP2O15409 715 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 GUCY1B3Q02153 619 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 FAM200AQ8TCP9 573 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 BICD2Q8TD16 824 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 HELLSQ9NRZ9 838 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 ERVV-2B6SEH9 535 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 FAM89AQ96GI7 184 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 DSCC1Q9BVC3 393 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 PYCARDQ9ULZ3 195 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 PTPDC1A2A3K4 754 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 CBX8Q9HC52 389 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 GPR108Q9NPR9 543 aa12.26□□□□□ -0.45
CLSTN1-203ENST00000435891 PARP4Q9UKK3 1724 aaKnown RBP12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 HAND2P61296 217 aa12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 UBR2Q8IWV8 1755 aa12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 A0A087WWV3 80 aa12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 RNF113AO15541 343 aaKnown RBP12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 CLSTN2Q9H4D0 955 aa12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 COL5A2P05997 1499 aaPredicted RBP12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 RBM43Q6ZSC3 357 aaKnown RBP12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 IPO4Q8TEX9 1081 aaKnown RBP12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 AGXT2Q9BYV1 514 aa12.25□□□□□ -0.45
CLSTN1-203ENST00000435891 IL2RBP14784 551 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 ISCA1Q9BUE6 129 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 SASS6Q6UVJ0 657 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 XAGE2Q96GT9 111 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 DNAJC25Q9H1X3 360 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 ASAP1Q9ULH1 1129 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 PDIA3P30101 505 aaKnown RBP12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 ILDR1Q86SU0 546 aaPredicted RBP12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 RAB11FIP4Q86YS3 637 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 USP28Q96RU2 1077 aa12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 DDX19AQ9NUU7 478 aaKnown RBP12.24□□□□□ -0.45
CLSTN1-203ENST00000435891 GOLPH3LQ9H4A5 285 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 CEP126Q9P2H0 1117 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 SALL1Q9NSC2 1324 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 ZSCAN20P17040 1043 aaPredicted RBP12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 TCIRG1Q13488 830 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 CCDC57Q2TAC2 916 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 OTUD7BQ6GQQ9 843 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 NRBP1Q9UHY1 535 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 CIAO1O76071 339 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 HMGB1P09429 215 aaKnown RBP12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 FDPSP14324 419 aaKnown RBP12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 PTGS1P23219 599 aa12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 PUS7LQ9H0K6 701 aaKnown RBP12.23□□□□□ -0.45
CLSTN1-203ENST00000435891 ZAP70P43403 619 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 ZSCAN16Q9H4T2 348 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 GJB4Q9NTQ9 266 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 TNS2Q63HR2 1409 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 WASHC4Q2M389 1173 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 ERCC4Q92889 916 aaPredicted RBP12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 LLPHQ9BRT6 129 aaKnown RBP12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 DENND2AQ9ULE3 1009 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 GPTP24298 496 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 SPTLC3Q9NUV7 552 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 SHANK3Q9BYB0 1731 aa12.22□□□□□ -0.45
CLSTN1-203ENST00000435891 FGAP02671 866 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 HLFQ16534 295 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 TTC39AQ5SRH9 613 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 GORABQ5T7V8 394 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 CARD10Q9BWT7 1032 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 ATG3Q9NT62 314 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 NWD2Q9ULI1 1742 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 ZNF165P49910 485 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 LRMPQ12912 555 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 NAA16Q6N069 864 aaPredicted RBP12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 RCOR1Q9UKL0 485 aa12.21□□□□□ -0.45
CLSTN1-203ENST00000435891 XIRP1Q702N8 1843 aaKnown RBP12.21□□□□□ -0.46
CLSTN1-203ENST00000435891 PIGBQ92521 554 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms