RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 FPGT-TNNI3KV9GXZ4 949 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 COL4A1P02462 1669 aa20.32■□□□□ 0.84
CTDSPL-204ENST00000435525 SNED1Q8TER0 1413 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 FGFR2P21802 821 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 ANKRD45Q5TZF3 282 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 AACSQ86V21 672 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 COA1Q9GZY4 146 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 RNF181Q9P0P0 153 aa20.31■□□□□ 0.84
CTDSPL-204ENST00000435525 FRAT2O75474 233 aaPredicted RBP20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 IGHDP01880 384 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 HIBADHP31937 336 aaKnown RBP20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 SLC51AQ86UW1 340 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 SMC5Q8IY18 1101 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 GPATCH3Q96I76 525 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 IL1RAPL2Q9NP60 686 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 TAF1P21675 1872 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 CACNA1SQ13698 1873 aa20.3■□□□□ 0.84
CTDSPL-204ENST00000435525 TIMM10P62072 90 aa20.29■□□□□ 0.84
CTDSPL-204ENST00000435525 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
CTDSPL-204ENST00000435525 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
CTDSPL-204ENST00000435525 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
CTDSPL-204ENST00000435525 PODNQ7Z5L7 613 aa20.29■□□□□ 0.84
CTDSPL-204ENST00000435525 SNAP23O00161 211 aa20.28■□□□□ 0.84
CTDSPL-204ENST00000435525 EIF6P56537 245 aaKnown RBP20.28■□□□□ 0.84
CTDSPL-204ENST00000435525 XAGE2Q96GT9 111 aa20.28■□□□□ 0.84
CTDSPL-204ENST00000435525 GPR101Q96P66 508 aaPredicted RBP20.28■□□□□ 0.84
CTDSPL-204ENST00000435525 ZNRF3Q9ULT6 936 aa20.28■□□□□ 0.84
CTDSPL-204ENST00000435525 ECE2O60344 883 aa20.27■□□□□ 0.84
CTDSPL-204ENST00000435525 UQCRFS1P1P0C7P4 283 aa20.27■□□□□ 0.84
CTDSPL-204ENST00000435525 SPEF2Q9C093 1822 aa20.27■□□□□ 0.84
CTDSPL-204ENST00000435525 ZNF609O15014 1411 aa20.27■□□□□ 0.83
CTDSPL-204ENST00000435525 ZC3H4Q9UPT8 1303 aaKnown RBP20.27■□□□□ 0.83
CTDSPL-204ENST00000435525 GYG1P46976 350 aa20.26■□□□□ 0.83
CTDSPL-204ENST00000435525 DOK7Q18PE1 504 aa20.26■□□□□ 0.83
CTDSPL-204ENST00000435525 TTC39AQ5SRH9 613 aa20.26■□□□□ 0.83
CTDSPL-204ENST00000435525 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
CTDSPL-204ENST00000435525 FAM84BQ96KN1 310 aaPredicted RBP20.26■□□□□ 0.83
CTDSPL-204ENST00000435525 SEMA3EO15041 775 aa20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 FBXO33Q7Z6M2 555 aa20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 EAF2Q96CJ1 260 aaPredicted RBP20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 CCDC8Q9H0W5 538 aaPredicted RBP20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 DBNDD1Q9H9R9 158 aa20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 CD209Q9NNX6 404 aa20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 DUOX1Q9NRD9 1551 aa20.25■□□□□ 0.83
CTDSPL-204ENST00000435525 WTIPA6NIX2 430 aaPredicted RBP20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 KLRK1P26718 216 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 BCAMP50895 628 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 NUCB1Q02818 461 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 TNIP1Q15025 636 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 CCDC102BQ68D86 513 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 DPY19L2Q6NUT2 758 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 TXNRD3Q86VQ6 643 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 CHD1LQ86WJ1 897 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 DBNDD2Q9BQY9 259 aa20.24■□□□□ 0.83
CTDSPL-204ENST00000435525 IL1R1P14778 569 aa20.23■□□□□ 0.83
CTDSPL-204ENST00000435525 ADORA1P30542 326 aa20.23■□□□□ 0.83
CTDSPL-204ENST00000435525 FBXW7Q969H0 707 aa20.23■□□□□ 0.83
CTDSPL-204ENST00000435525 DENND2AQ9ULE3 1009 aa20.23■□□□□ 0.83
CTDSPL-204ENST00000435525 FER1L6Q2WGJ9 1857 aa20.22■□□□□ 0.83
CTDSPL-204ENST00000435525 DBNLQ9UJU6 430 aaKnown RBP20.22■□□□□ 0.83
CTDSPL-204ENST00000435525 IRS2Q9Y4H2 1338 aa20.22■□□□□ 0.83
CTDSPL-204ENST00000435525 USP17L3A6NCW0 530 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 USP17L4A6NCW7 530 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 FZD9O00144 591 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 ERC2O15083 957 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 PHKA1P46020 1223 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 CIAPIN1Q6FI81 312 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 USP17L1Q7RTZ2 530 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 TDRD7Q8NHU6 1098 aaKnown RBP20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 LNPKQ9C0E8 428 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 LTBP1Q14766 1721 aa20.21■□□□□ 0.83
CTDSPL-204ENST00000435525 TTLL5Q6EMB2 1281 aa20.2■□□□□ 0.82
CTDSPL-204ENST00000435525 TBC1D22AQ8WUA7 517 aa20.2■□□□□ 0.82
CTDSPL-204ENST00000435525 ZNF512BQ96KM6 892 aaPredicted RBP20.2■□□□□ 0.82
CTDSPL-204ENST00000435525 ECHDC1Q9NTX5 307 aa20.2■□□□□ 0.82
CTDSPL-204ENST00000435525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.2■□□□□ 0.82
CTDSPL-204ENST00000435525 ZBTB22O15209 634 aa20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 PRELPP51888 382 aa20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 STRIP1Q5VSL9 837 aa20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 ZGPATQ8N5A5 531 aaKnown RBP20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 WDR66Q8TBY9 1149 aa20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 KDM2BQ8NHM5 1336 aa20.19■□□□□ 0.82
CTDSPL-204ENST00000435525 RAD17O75943 681 aa20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 MX1P20591 662 aa20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 ARID4AP29374 1257 aaPredicted RBP20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 GTF2IP78347 998 aa20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 CHAF1AQ13111 956 aaPredicted RBP20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 TLR7Q9NYK1 1049 aaKnown RBP20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 IQSEC3Q9UPP2 1182 aaPredicted RBP20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 TTC41PQ6P2S7 1318 aa20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 MYO3BQ8WXR4 1341 aa20.18■□□□□ 0.82
CTDSPL-204ENST00000435525 CXCL9Q07325 125 aa20.17■□□□□ 0.82
CTDSPL-204ENST00000435525 GPC2Q8N158 579 aa20.17■□□□□ 0.82
CTDSPL-204ENST00000435525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.17■□□□□ 0.82
CTDSPL-204ENST00000435525 GJA3Q9Y6H8 435 aa20.17■□□□□ 0.82
CTDSPL-204ENST00000435525 PDS5AQ29RF7 1337 aaKnown RBP20.17■□□□□ 0.82
CTDSPL-204ENST00000435525 SRCAPQ6ZRS2 3230 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms