RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 SIK1P57059 783 aa28.23■■■□□ 2.11
MBD3-202ENST00000434436 ITPK1Q13572 414 aa28.23■■■□□ 2.11
MBD3-202ENST00000434436 GTF3C6Q969F1 213 aa28.22■■■□□ 2.11
MBD3-202ENST00000434436 LRRC2Q9BYS8 371 aa28.22■■■□□ 2.11
MBD3-202ENST00000434436 DNM1Q05193 864 aaKnown RBP28.22■■■□□ 2.11
MBD3-202ENST00000434436 LRRFIP1Q32MZ4 808 aaKnown RBP28.21■■■□□ 2.11
MBD3-202ENST00000434436 SUSD4Q5VX71 490 aa28.21■■■□□ 2.11
MBD3-202ENST00000434436 ZFYP08048 801 aaPredicted RBP28.21■■■□□ 2.11
MBD3-202ENST00000434436 HMGB1P09429 215 aaKnown RBP28.21■■■□□ 2.11
MBD3-202ENST00000434436 MCAMP43121 646 aa28.21■■■□□ 2.11
MBD3-202ENST00000434436 CDC37L1Q7L3B6 337 aa28.21■■■□□ 2.11
MBD3-202ENST00000434436 DHX32Q7L7V1 743 aaKnown RBP28.21■■■□□ 2.11
MBD3-202ENST00000434436 LRP5O75197 1615 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 E7EWF7 191 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 FOXP2O15409 715 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 FIBPO43427 364 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 BARGINQ6ZT62 677 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 BRF1Q92994 677 aa28.2■■■□□ 2.11
MBD3-202ENST00000434436 RRAGDQ9NQL2 400 aaPredicted RBP28.2■■■□□ 2.11
MBD3-202ENST00000434436 CICQ96RK0 1608 aaPredicted RBP28.2■■■□□ 2.1
MBD3-202ENST00000434436 PDIA4P13667 645 aaKnown RBP28.2■■■□□ 2.1
MBD3-202ENST00000434436 PDCP20941 246 aa28.2■■■□□ 2.1
MBD3-202ENST00000434436 EXOSC10Q01780 885 aaKnown RBP28.2■■■□□ 2.1
MBD3-202ENST00000434436 PDE8BO95263 885 aa28.19■■■□□ 2.1
MBD3-202ENST00000434436 TTLL5Q6EMB2 1281 aa28.19■■■□□ 2.1
MBD3-202ENST00000434436 SYAP1Q96A49 352 aaPredicted RBP28.19■■■□□ 2.1
MBD3-202ENST00000434436 CAMTA2O94983 1202 aa28.19■■■□□ 2.1
MBD3-202ENST00000434436 WASHC4Q2M389 1173 aa28.19■■■□□ 2.1
MBD3-202ENST00000434436 ZNF512BQ96KM6 892 aaPredicted RBP28.18■■■□□ 2.1
MBD3-202ENST00000434436 JAK2O60674 1132 aa28.18■■■□□ 2.1
MBD3-202ENST00000434436 HCLS1P14317 486 aaPredicted RBP28.18■■■□□ 2.1
MBD3-202ENST00000434436 HSP90B1P14625 803 aaKnown RBP28.18■■■□□ 2.1
MBD3-202ENST00000434436 UBE2HP62256 183 aa28.18■■■□□ 2.1
MBD3-202ENST00000434436 APPBP2Q92624 585 aa28.18■■■□□ 2.1
MBD3-202ENST00000434436 AK7Q96M32 723 aa28.18■■■□□ 2.1
MBD3-202ENST00000434436 MYO5AQ9Y4I1 1855 aaKnown RBP28.17■■■□□ 2.1
MBD3-202ENST00000434436 PUS7LQ9H0K6 701 aaKnown RBP28.17■■■□□ 2.1
MBD3-202ENST00000434436 PPP1R9BQ96SB3 815 aa28.17■■■□□ 2.1
MBD3-202ENST00000434436 AGXT2Q9BYV1 514 aa28.17■■■□□ 2.1
MBD3-202ENST00000434436 FAM177BA6PVY3 158 aa28.16■■■□□ 2.1
MBD3-202ENST00000434436 PIP4K2BP78356 416 aa28.16■■■□□ 2.1
MBD3-202ENST00000434436 CCDC173Q0VFZ6 552 aa28.16■■■□□ 2.1
MBD3-202ENST00000434436 SCRN1Q12765 414 aa28.16■■■□□ 2.1
MBD3-202ENST00000434436 FERMT3Q86UX7 667 aa28.16■■■□□ 2.1
MBD3-202ENST00000434436 DDX60Q8IY21 1712 aaKnown RBP28.15■■■□□ 2.1
MBD3-202ENST00000434436 KCNQ2O43526 872 aa28.15■■■□□ 2.1
MBD3-202ENST00000434436 UTP14AQ9BVJ6 771 aaKnown RBP28.15■■■□□ 2.1
MBD3-202ENST00000434436 FGD1P98174 961 aa28.14■■■□□ 2.1
MBD3-202ENST00000434436 PFKFB2O60825 505 aa28.14■■■□□ 2.1
MBD3-202ENST00000434436 HELBQ8NG08 1087 aaPredicted RBP28.14■■■□□ 2.1
MBD3-202ENST00000434436 ARAP2Q8WZ64 1704 aa28.14■■■□□ 2.09
MBD3-202ENST00000434436 FGFR2P21802 821 aa28.13■■■□□ 2.09
MBD3-202ENST00000434436 PHKA1P46020 1223 aa28.13■■■□□ 2.09
MBD3-202ENST00000434436 APOBRQ0VD83 1088 aa28.13■■■□□ 2.09
MBD3-202ENST00000434436 CCDC102BQ68D86 513 aa28.13■■■□□ 2.09
MBD3-202ENST00000434436 MROH5Q6ZUA9 1318 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 CSPP1Q1MSJ5 1256 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 TPRNQ4KMQ1 711 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 FAM173BQ6P4H8 233 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 FGAP02671 866 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 ARID4AP29374 1257 aaPredicted RBP28.12■■■□□ 2.09
MBD3-202ENST00000434436 PIH1D3Q9NQM4 214 aaKnown RBP28.12■■■□□ 2.09
MBD3-202ENST00000434436 CTNNA3Q9UI47 895 aa28.12■■■□□ 2.09
MBD3-202ENST00000434436 COL5A3P25940 1745 aaPredicted RBP28.12■■■□□ 2.09
MBD3-202ENST00000434436 ADD2P35612 726 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 PUM3Q15397 648 aaKnown RBP28.11■■■□□ 2.09
MBD3-202ENST00000434436 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 SMARCC2Q8TAQ2 1214 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 SEC31BQ9NQW1 1179 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 GPAA1O43292 621 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 CHST3Q7LGC8 479 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 LPIN2Q92539 896 aa28.11■■■□□ 2.09
MBD3-202ENST00000434436 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.11■■■□□ 2.093e-6■■■■■ 28.4
MBD3-202ENST00000434436 CCDC183Q5T5S1 534 aa28.1■■■□□ 2.09
MBD3-202ENST00000434436 ANP32BQ92688 251 aaKnown RBP28.1■■■□□ 2.09
MBD3-202ENST00000434436 PHF14O94880 888 aa28.1■■■□□ 2.09
MBD3-202ENST00000434436 NTSR2O95665 410 aa28.1■■■□□ 2.09
MBD3-202ENST00000434436 HAND2P61296 217 aa28.1■■■□□ 2.09
MBD3-202ENST00000434436 TSPY26PQ9H489 355 aa28.1■■■□□ 2.09
MBD3-202ENST00000434436 TTF1Q15361 905 aaPredicted RBP28.09■■■□□ 2.09
MBD3-202ENST00000434436 SMARCC1Q92922 1105 aaPredicted RBP28.09■■■□□ 2.09
MBD3-202ENST00000434436 LLPHQ9BRT6 129 aaKnown RBP28.09■■■□□ 2.09
MBD3-202ENST00000434436 NIP7Q9Y221 180 aaKnown RBP eCLIP28.09■■■□□ 2.09
MBD3-202ENST00000434436 LAMB2P55268 1798 aa28.09■■■□□ 2.09
MBD3-202ENST00000434436 CTDNEP1O95476 244 aa28.09■■■□□ 2.09
MBD3-202ENST00000434436 KRT85P78386 507 aa28.09■■■□□ 2.09
MBD3-202ENST00000434436 IMMTQ16891 758 aaKnown RBP28.09■■■□□ 2.09
MBD3-202ENST00000434436 TTC6Q86TZ1 520 aa28.09■■■□□ 2.09
MBD3-202ENST00000434436 DDX11Q96FC9 970 aa28.09■■■□□ 2.09
MBD3-202ENST00000434436 TOM1O60784 492 aa28.08■■■□□ 2.09
MBD3-202ENST00000434436 SLC9C2Q5TAH2 1124 aa28.08■■■□□ 2.09
MBD3-202ENST00000434436 NSUN7Q8NE18 718 aaKnown RBP28.08■■■□□ 2.09
MBD3-202ENST00000434436 UQCRFS1P1P0C7P4 283 aa28.08■■■□□ 2.09
MBD3-202ENST00000434436 ZSCAN25Q6NSZ9 544 aa28.08■■■□□ 2.09
MBD3-202ENST00000434436 TRIM44Q96DX7 344 aaPredicted RBP28.08■■■□□ 2.09
MBD3-202ENST00000434436 SNAP23O00161 211 aa28.07■■■□□ 2.08
MBD3-202ENST00000434436 FAM98CQ17RN3 349 aaKnown RBP28.07■■■□□ 2.08
MBD3-202ENST00000434436 ATRNO75882 1429 aa28.07■■■□□ 2.08
MBD3-202ENST00000434436 BCORQ6W2J9 1755 aa28.07■■■□□ 2.08
MBD3-202ENST00000434436 FBXL16Q8N461 479 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms