RNA–Protein interactions for RNA: ENST00000434192.2

GTF2A1-202, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GTF2A1, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-202ENST00000434192 RHOQP17081 205 aa9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 ZC3H6P61129 1189 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 U2AF1Q01081 240 aaKnown RBP eCLIP9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 EIF4A2Q14240 407 aaKnown RBP9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 HSP90AB2PQ58FF8 381 aa9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 LYSMD3Q7Z3D4 306 aa9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 ADAMTS8Q9UP79 889 aa9.09□□□□□ -0.95
GTF2A1-202ENST00000434192 MAPK8IP3Q9UPT6 1336 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 FAM83GA6ND36 823 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 IL13P35225 146 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 RNF144AP50876 292 aaPredicted RBP9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 SLFNL1Q499Z3 407 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 ARHGEF10LQ9HCE6 1279 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 PRDM11Q9NQV5 511 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 RAB6BQ9NRW1 208 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 COG6Q9Y2V7 657 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 KDRP35968 1356 aa9.08□□□□□ -0.96
GTF2A1-202ENST00000434192 ZBED9Q6R2W3 1325 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 IGSF1Q8N6C5 1336 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 SENP3-EIF4A1A0A087X0R7 540 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 TRAK2O60296 914 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 NEFMP07197 916 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 RNF135Q8IUD6 432 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 GPR161Q8N6U8 529 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 NLRP3Q96P20 1036 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 PNNQ9H307 717 aaKnown RBP9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 BTG4Q9NY30 223 aa9.07□□□□□ -0.96
GTF2A1-202ENST00000434192 CDC14CA4D256 554 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 MYCP01106 439 aaPredicted RBP9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 ITGA6P23229 1130 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 SLC27A3Q5K4L6 730 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 CCDC146Q8IYE0 955 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 PHTF2Q8N3S3 785 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 ANKRD24Q8TF21 1146 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 RUNDC1Q96C34 613 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 POM121Q96HA1 1249 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 DOLKQ9UPQ8 538 aa9.06□□□□□ -0.96
GTF2A1-202ENST00000434192 NHSQ6T4R5 1651 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 PLEKHG2Q9H7P9 1386 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 HMOX1P09601 288 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 CHRNA2Q15822 529 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 VWA5B2Q8N398 1253 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 ZSCAN1Q8NBB4 408 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 LTV1Q96GA3 475 aaPredicted RBP9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 STK17AQ9UEE5 414 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 SPATA31A5Q5VU36 1347 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 SPATA31A7Q8IWB4 1347 aa9.05□□□□□ -0.96
GTF2A1-202ENST00000434192 CENPBP07199 599 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 PRKAR2BP31323 418 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 SEMA3FQ13275 785 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 CLN3Q13286 438 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 SULT6B1Q6IMI4 303 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 CCDC9Q9Y3X0 531 aaKnown RBP9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 CRB1P82279 1406 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 WDR17Q8IZU2 1322 aa9.04□□□□□ -0.96
GTF2A1-202ENST00000434192 BTAF1O14981 1849 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 DOT1LQ8TEK3 1739 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 CSB-PGBD3P0DP91 1061 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 LORP23490 312 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 GPC1P35052 558 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 POU4F2Q12837 409 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 NGEFQ8N5V2 710 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 SCN11AQ9UI33 1791 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 ADAMTS7Q9UKP4 1686 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 SPATA31A1Q5TZJ5 1347 aa9.03□□□□□ -0.96
GTF2A1-202ENST00000434192 LRP5O75197 1615 aa9.02□□□□□ -0.96
GTF2A1-202ENST00000434192 SIPA1L3O60292 1781 aaPredicted RBP9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 MEGF6O75095 1541 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 GNRH1P01148 92 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 NANOS1Q8WY41 292 aaKnown RBP9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 CNTNAP3BQ96NU0 1288 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 PLEKHF1Q96S99 279 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 CNTNAP3Q9BZ76 1288 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 ITGB4P16144 1822 aa9.02□□□□□ -0.97
GTF2A1-202ENST00000434192 APAF1O14727 1248 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 RAD21O60216 631 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 STAU1O95793 577 aaKnown RBP9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 IL2RAP01589 272 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 KRT76Q01546 638 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 USP4Q13107 963 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 QSER1Q2KHR3 1735 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 SV2AQ7L0J3 742 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 TCP11L2Q8N4U5 519 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 USHBP1Q8N6Y0 703 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 CNKSR1Q969H4 720 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
GTF2A1-202ENST00000434192 OVOS2A0A0G2JMS6 1433 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 FLIIQ13045 1269 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 NBPF6Q5VWK0 638 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 TOM1L2Q6ZVM7 507 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 KRT27Q7Z3Y8 459 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 NBPF4Q96M43 638 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 COL25A1Q9BXS0 654 aaPredicted RBP9□□□□□ -0.97
GTF2A1-202ENST00000434192 STRN4Q9NRL3 753 aa9□□□□□ -0.97
GTF2A1-202ENST00000434192 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
GTF2A1-202ENST00000434192 NLRP2Q9NX02 1062 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms