RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ATP2B4P23634 1241 aa32.31■■■□□ 2.76
TMEM248-205ENST00000433271 GGA1Q9UJY5 639 aa32.31■■■□□ 2.76
TMEM248-205ENST00000433271 CACNA1SQ13698 1873 aa32.31■■■□□ 2.76
TMEM248-205ENST00000433271 TTC39AQ5SRH9 613 aa32.29■■■□□ 2.76
TMEM248-205ENST00000433271 CCDC102BQ68D86 513 aa32.29■■■□□ 2.76
TMEM248-205ENST00000433271 CC2D2BQ6DHV5 1058 aa32.29■■■□□ 2.76
TMEM248-205ENST00000433271 ZNF512BQ96KM6 892 aaPredicted RBP32.29■■■□□ 2.76
TMEM248-205ENST00000433271 OLFM4Q6UX06 510 aa32.29■■■□□ 2.76
TMEM248-205ENST00000433271 MPNDQ8N594 471 aa32.29■■■□□ 2.76
TMEM248-205ENST00000433271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP32.29■■■□□ 2.76
TMEM248-205ENST00000433271 UFL1O94874 794 aa32.28■■■□□ 2.76
TMEM248-205ENST00000433271 CAVIN4Q5BKX8 364 aa32.28■■■□□ 2.76
TMEM248-205ENST00000433271 TBC1D16Q8TBP0 767 aa32.28■■■□□ 2.76
TMEM248-205ENST00000433271 BOLA2Q9H3K6 86 aa32.28■■■□□ 2.76
TMEM248-205ENST00000433271 PHKA1P46020 1223 aa32.27■■■□□ 2.76
TMEM248-205ENST00000433271 C15orf52Q6ZUT6 534 aaKnown RBP32.27■■■□□ 2.76
TMEM248-205ENST00000433271 LTBP1Q14766 1721 aa32.27■■■□□ 2.76
TMEM248-205ENST00000433271 SDSP20132 328 aa32.26■■■□□ 2.76
TMEM248-205ENST00000433271 DPP8Q6V1X1 898 aaPredicted RBP32.26■■■□□ 2.76
TMEM248-205ENST00000433271 POLLQ9UGP5 575 aa32.26■■■□□ 2.76
TMEM248-205ENST00000433271 IRS2Q9Y4H2 1338 aa32.26■■■□□ 2.76
TMEM248-205ENST00000433271 UQCRFS1P1P0C7P4 283 aa32.26■■■□□ 2.75
TMEM248-205ENST00000433271 KLRK1P26718 216 aa32.26■■■□□ 2.75
TMEM248-205ENST00000433271 BCAMP50895 628 aa32.26■■■□□ 2.75
TMEM248-205ENST00000433271 FAM84BQ96KN1 310 aaPredicted RBP32.26■■■□□ 2.75
TMEM248-205ENST00000433271 HAUS7Q99871 368 aa32.26■■■□□ 2.75
TMEM248-205ENST00000433271 GRIPAP1Q4V328 841 aa32.25■■■□□ 2.75
TMEM248-205ENST00000433271 C6orf229H3BNL8 230 aa32.24■■■□□ 2.75
TMEM248-205ENST00000433271 ARID4AP29374 1257 aaPredicted RBP32.24■■■□□ 2.75
TMEM248-205ENST00000433271 GYG1P46976 350 aa32.24■■■□□ 2.75
TMEM248-205ENST00000433271 DALRD3Q5D0E6 543 aaKnown RBP32.24■■■□□ 2.75
TMEM248-205ENST00000433271 FBXO33Q7Z6M2 555 aa32.24■■■□□ 2.75
TMEM248-205ENST00000433271 ZNF219Q9P2Y4 722 aaPredicted RBP32.24■■■□□ 2.75
TMEM248-205ENST00000433271 TRIM6-TRIM34B2RNG4 842 aa32.23■■■□□ 2.75
TMEM248-205ENST00000433271 C21orf2O43822 256 aa32.23■■■□□ 2.75
TMEM248-205ENST00000433271 VPS37DQ86XT2 251 aa32.23■■■□□ 2.75
TMEM248-205ENST00000433271 TXNRD3Q86VQ6 643 aa32.22■■■□□ 2.75
TMEM248-205ENST00000433271 GNL3LQ9NVN8 582 aaKnown RBP32.22■■■□□ 2.75
TMEM248-205ENST00000433271 HIBADHP31937 336 aaKnown RBP32.22■■■□□ 2.75
TMEM248-205ENST00000433271 BRCA1P38398 1863 aaKnown RBP32.21■■■□□ 2.75
TMEM248-205ENST00000433271 MAP4K4O95819 1239 aaPredicted RBP32.21■■■□□ 2.75
TMEM248-205ENST00000433271 CNTROBQ8N137 903 aa32.21■■■□□ 2.75
TMEM248-205ENST00000433271 NLGN2Q8NFZ4 835 aa32.21■■■□□ 2.75
TMEM248-205ENST00000433271 RILPL2Q969X0 211 aa32.21■■■□□ 2.75
TMEM248-205ENST00000433271 SCARF1Q14162 830 aa32.2■■■□□ 2.75
TMEM248-205ENST00000433271 SOGA3Q5TF21 947 aa32.2■■■□□ 2.75
TMEM248-205ENST00000433271 EVI5LQ96CN4 794 aa32.2■■■□□ 2.75
TMEM248-205ENST00000433271 RTFDC1Q9BY42 306 aaPredicted RBP32.2■■■□□ 2.75
TMEM248-205ENST00000433271 FHDC1Q9C0D6 1143 aaPredicted RBP32.2■■■□□ 2.75
TMEM248-205ENST00000433271 DUOX1Q9NRD9 1551 aa32.2■■■□□ 2.74
TMEM248-205ENST00000433271 SNED1Q8TER0 1413 aa32.19■■■□□ 2.74
TMEM248-205ENST00000433271 MED23Q9ULK4 1368 aa32.19■■■□□ 2.74
TMEM248-205ENST00000433271 MCAMP43121 646 aa32.19■■■□□ 2.74
TMEM248-205ENST00000433271 CCDC93Q567U6 631 aa32.19■■■□□ 2.74
TMEM248-205ENST00000433271 RTKN2Q8IZC4 609 aa32.19■■■□□ 2.74
TMEM248-205ENST00000433271 GPR101Q96P66 508 aaPredicted RBP32.19■■■□□ 2.74
TMEM248-205ENST00000433271 DNAJC2Q99543 621 aaKnown RBP32.19■■■□□ 2.74
TMEM248-205ENST00000433271 ZBTB22O15209 634 aa32.18■■■□□ 2.74
TMEM248-205ENST00000433271 ZNF804AQ7Z570 1209 aa32.18■■■□□ 2.74
TMEM248-205ENST00000433271 FKBP4Q02790 459 aaKnown RBP eCLIP32.17■■■□□ 2.74
TMEM248-205ENST00000433271 RASGRF1Q13972 1273 aa32.17■■■□□ 2.74
TMEM248-205ENST00000433271 EYA3Q99504 573 aa32.17■■■□□ 2.74
TMEM248-205ENST00000433271 PAG1Q9NWQ8 432 aa32.17■■■□□ 2.74
TMEM248-205ENST00000433271 SEMA3EO15041 775 aa32.16■■■□□ 2.74
TMEM248-205ENST00000433271 ZC3H12CQ9C0D7 883 aaKnown RBP32.16■■■□□ 2.74
TMEM248-205ENST00000433271 SNRKQ9NRH2 765 aa32.16■■■□□ 2.74
TMEM248-205ENST00000433271 HMG20BQ9P0W2 317 aa32.16■■■□□ 2.74
TMEM248-205ENST00000433271 NDUFB9Q9Y6M9 179 aa32.16■■■□□ 2.74
TMEM248-205ENST00000433271 WASHC4Q2M389 1173 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 SPATA5Q8NB90 893 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 AKAP11Q9UKA4 1901 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 ZAP70P43403 619 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 C8orf34Q49A92 452 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 PI16Q6UXB8 463 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 SUPT20HQ8NEM7 779 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 EDC3Q96F86 508 aaKnown RBP32.15■■■□□ 2.74
TMEM248-205ENST00000433271 WWC3Q9ULE0 1092 aa32.15■■■□□ 2.74
TMEM248-205ENST00000433271 GOLIM4O00461 696 aa32.14■■■□□ 2.74
TMEM248-205ENST00000433271 CDC45O75419 566 aa32.14■■■□□ 2.74
TMEM248-205ENST00000433271 SYT17Q9BSW7 474 aa32.13■■■□□ 2.73
TMEM248-205ENST00000433271 DENND2AQ9ULE3 1009 aa32.13■■■□□ 2.73
TMEM248-205ENST00000433271 BCS1LQ9Y276 419 aa32.13■■■□□ 2.73
TMEM248-205ENST00000433271 PSMD1Q99460 953 aa32.12■■■□□ 2.73
TMEM248-205ENST00000433271 IQSEC3Q9UPP2 1182 aaPredicted RBP32.12■■■□□ 2.73
TMEM248-205ENST00000433271 RIMBP2O15034 1052 aa32.11■■■□□ 2.73
TMEM248-205ENST00000433271 TDRD7Q8NHU6 1098 aaKnown RBP32.11■■■□□ 2.73
TMEM248-205ENST00000433271 FRAT2O75474 233 aaPredicted RBP32.11■■■□□ 2.73
TMEM248-205ENST00000433271 TTF1Q15361 905 aaPredicted RBP32.11■■■□□ 2.73
TMEM248-205ENST00000433271 KBTBD3Q8NAB2 608 aa32.11■■■□□ 2.73
TMEM248-205ENST00000433271 CD209Q9NNX6 404 aa32.11■■■□□ 2.73
TMEM248-205ENST00000433271 PDS5AQ29RF7 1337 aaKnown RBP32.1■■■□□ 2.73
TMEM248-205ENST00000433271 CYP2E1P05181 493 aaPredicted RBP32.1■■■□□ 2.73
TMEM248-205ENST00000433271 IL1R1P14778 569 aa32.1■■■□□ 2.73
TMEM248-205ENST00000433271 TICAM2Q86XR7 235 aa32.1■■■□□ 2.73
TMEM248-205ENST00000433271 FSD1Q9BTV5 496 aa32.1■■■□□ 2.73
TMEM248-205ENST00000433271 COA1Q9GZY4 146 aa32.1■■■□□ 2.73
TMEM248-205ENST00000433271 ANTXR1Q9H6X2 564 aa32.1■■■□□ 2.73
TMEM248-205ENST00000433271 TBC1D9Q6ZT07 1266 aa32.09■■■□□ 2.73
TMEM248-205ENST00000433271 AK9Q5TCS8 1911 aa32.09■■■□□ 2.73
TMEM248-205ENST00000433271 CASC1Q6TDU7 716 aa32.08■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms